RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 HIST1H2BNQ99877 126 aa11.64□□□□□ -0.55
SCAMP4-213ENST00000621748 HIST1H2BMQ99879 126 aa11.64□□□□□ -0.55
SCAMP4-213ENST00000621748 C2orf88Q9BSF0 95 aa11.64□□□□□ -0.55
SCAMP4-213ENST00000621748 PYGO1Q9Y3Y4 419 aa11.64□□□□□ -0.55
SCAMP4-213ENST00000621748 NPSP0C0P6 89 aa11.63□□□□□ -0.55
SCAMP4-213ENST00000621748 SS18Q15532 418 aa11.63□□□□□ -0.55
SCAMP4-213ENST00000621748 ERASQ7Z444 233 aa11.63□□□□□ -0.55
SCAMP4-213ENST00000621748 CHAC1Q9BUX1 264 aa11.63□□□□□ -0.55
SCAMP4-213ENST00000621748 VCX2Q9H322 139 aa11.63□□□□□ -0.55
SCAMP4-213ENST00000621748 CDC42SE2Q9NRR3 84 aa11.63□□□□□ -0.55
SCAMP4-213ENST00000621748 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.62□□□□□ -0.55
SCAMP4-213ENST00000621748 SERF1AO75920 110 aa11.62□□□□□ -0.55
SCAMP4-213ENST00000621748 NDUFA6P56556 154 aa11.62□□□□□ -0.55
SCAMP4-213ENST00000621748 MRPS36P82909 103 aaKnown RBP11.62□□□□□ -0.55
SCAMP4-213ENST00000621748 TEX43Q6ZNM6 134 aa11.62□□□□□ -0.55
SCAMP4-213ENST00000621748 LINC00528Q8N1L1 170 aa11.62□□□□□ -0.55
SCAMP4-213ENST00000621748 ATP5LO75964 103 aa11.61□□□□□ -0.55
SCAMP4-213ENST00000621748 S100A6P06703 90 aa11.61□□□□□ -0.55
SCAMP4-213ENST00000621748 PMCHL1Q16048 86 aa11.61□□□□□ -0.55
SCAMP4-213ENST00000621748 CIRBP-AS1Q8TBR5 109 aa11.61□□□□□ -0.55
SCAMP4-213ENST00000621748 TIMM17AQ99595 171 aa11.61□□□□□ -0.55
SCAMP4-213ENST00000621748 IFITM10A6NMD0 228 aa11.6□□□□□ -0.55
SCAMP4-213ENST00000621748 CCL25O15444 150 aa11.6□□□□□ -0.55
SCAMP4-213ENST00000621748 C9orf163Q8N9P6 203 aa11.6□□□□□ -0.55
SCAMP4-213ENST00000621748 Q6ZUT4 128 aa11.59□□□□□ -0.55
SCAMP4-213ENST00000621748 URB1-AS1Q96HZ7 61 aa11.59□□□□□ -0.55
SCAMP4-213ENST00000621748 DMBT1Q9UGM3 2413 aaPredicted RBP11.59□□□□□ -0.55
SCAMP4-213ENST00000621748 RNASE13Q5GAN3 156 aaKnown RBP11.58□□□□□ -0.56
SCAMP4-213ENST00000621748 HSPB8Q9UJY1 196 aa11.58□□□□□ -0.56
SCAMP4-213ENST00000621748 IGLV4-3A0A075B6K6 122 aa11.57□□□□□ -0.56
SCAMP4-213ENST00000621748 TRAV13-1A0A0B4J241 112 aa11.57□□□□□ -0.56
SCAMP4-213ENST00000621748 IGIPA6NJ69 53 aa11.57□□□□□ -0.56
SCAMP4-213ENST00000621748 LEPROTL1O95214 131 aa11.57□□□□□ -0.56
SCAMP4-213ENST00000621748 PLA2G1BP04054 148 aaKnown RBP11.57□□□□□ -0.56
SCAMP4-213ENST00000621748 FAM19A2Q8N3H0 131 aa11.57□□□□□ -0.56
SCAMP4-213ENST00000621748 LINC00959A0A1B0GUT2 108 aa11.56□□□□□ -0.56
SCAMP4-213ENST00000621748 hDV102S1A0JD36 115 aa11.56□□□□□ -0.56
SCAMP4-213ENST00000621748 GAGE12HA6NDE8 117 aa11.56□□□□□ -0.56
SCAMP4-213ENST00000621748 OPRPNQ99935 248 aaPredicted RBP11.56□□□□□ -0.56
SCAMP4-213ENST00000621748 SLPIP03973 132 aa11.55□□□□□ -0.56
SCAMP4-213ENST00000621748 CNBPP62633 177 aaKnown RBP11.55□□□□□ -0.56
SCAMP4-213ENST00000621748 SEC11AP67812 179 aa11.55□□□□□ -0.56
SCAMP4-213ENST00000621748 SDIM1Q6ZPB5 146 aa11.55□□□□□ -0.56
SCAMP4-213ENST00000621748 XCL1P47992 114 aa11.54□□□□□ -0.56
SCAMP4-213ENST00000621748 PMVKQ15126 192 aa11.54□□□□□ -0.56
SCAMP4-213ENST00000621748 PDZD11Q5EBL8 140 aa11.54□□□□□ -0.56
SCAMP4-213ENST00000621748 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.54□□□□□ -0.56
SCAMP4-213ENST00000621748 PANO1I0J062 215 aa11.53□□□□□ -0.56
SCAMP4-213ENST00000621748 FABP4P15090 132 aa11.53□□□□□ -0.56
SCAMP4-213ENST00000621748 S100A2P29034 98 aa11.53□□□□□ -0.56
SCAMP4-213ENST00000621748 KRTAP10-4P60372 401 aaPredicted RBP11.53□□□□□ -0.56
SCAMP4-213ENST00000621748 C15orf56Q8N910 161 aa11.53□□□□□ -0.56
SCAMP4-213ENST00000621748 CHCHD10Q8WYQ3 142 aaPredicted RBP11.53□□□□□ -0.56
SCAMP4-213ENST00000621748 IFI27L1Q96BM0 104 aa11.53□□□□□ -0.56
SCAMP4-213ENST00000621748 COA6Q5JTJ3 125 aaKnown RBP11.52□□□□□ -0.57
SCAMP4-213ENST00000621748 GEMIN7Q9H840 131 aaKnown RBP11.52□□□□□ -0.57
SCAMP4-213ENST00000621748 A0A096LNJ9 63 aa11.51□□□□□ -0.57
SCAMP4-213ENST00000621748 MALP21145 153 aa11.51□□□□□ -0.57
SCAMP4-213ENST00000621748 CFAP161Q6P656 301 aa11.51□□□□□ -0.57
SCAMP4-213ENST00000621748 AMELXQ99217 191 aa11.51□□□□□ -0.57
SCAMP4-213ENST00000621748 MAP1LC3CQ9BXW4 147 aa11.51□□□□□ -0.57
SCAMP4-213ENST00000621748 PKHD1L1Q86WI1 4243 aa11.51□□□□□ -0.57
SCAMP4-213ENST00000621748 NUPR1O60356 82 aa11.5□□□□□ -0.57
SCAMP4-213ENST00000621748 CD164L2Q6UWJ8 174 aa11.5□□□□□ -0.57
SCAMP4-213ENST00000621748 PACRGQ96M98 296 aaPredicted RBP11.5□□□□□ -0.57
SCAMP4-213ENST00000621748 CST9LQ9H4G1 147 aa11.5□□□□□ -0.57
SCAMP4-213ENST00000621748 H0Y8G0 127 aa11.49□□□□□ -0.57
SCAMP4-213ENST00000621748 LINC00310P59036 64 aa11.49□□□□□ -0.57
SCAMP4-213ENST00000621748 FOXI1Q12951 378 aa11.49□□□□□ -0.57
SCAMP4-213ENST00000621748 LRP1Q07954 4544 aaKnown RBP11.49□□□□□ -0.57
SCAMP4-213ENST00000621748 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.48□□□□□ -0.57
SCAMP4-213ENST00000621748 COX7A2LO14548 114 aa11.48□□□□□ -0.57
SCAMP4-213ENST00000621748 UBE2D1P51668 147 aa11.48□□□□□ -0.57
SCAMP4-213ENST00000621748 HIGD2BQ4VC39 106 aa11.48□□□□□ -0.57
SCAMP4-213ENST00000621748 ZC2HC1BQ5TFG8 222 aa11.48□□□□□ -0.57
SCAMP4-213ENST00000621748 FAT3Q8TDW7 4589 aa11.47□□□□□ -0.57
SCAMP4-213ENST00000621748 IGHV3-64A0A075B6Q5 118 aa11.47□□□□□ -0.57
SCAMP4-213ENST00000621748 APOMO95445 188 aa11.47□□□□□ -0.57
SCAMP4-213ENST00000621748 HERVK_113P63121 156 aa11.47□□□□□ -0.57
SCAMP4-213ENST00000621748 CIRBPQ14011 172 aaKnown RBP11.47□□□□□ -0.57
SCAMP4-213ENST00000621748 CHTOPQ9Y3Y2 248 aaKnown RBP11.46□□□□□ -0.57
SCAMP4-213ENST00000621748 GVQW2A0A096LPI5 108 aaPredicted RBP11.45□□□□□ -0.58
SCAMP4-213ENST00000621748 CHTF8P0CG12 524 aa11.45□□□□□ -0.58
SCAMP4-213ENST00000621748 LINC00173Q6ZV60 143 aa11.45□□□□□ -0.58
SCAMP4-213ENST00000621748 FAM104AQ969W3 186 aa11.45□□□□□ -0.58
SCAMP4-213ENST00000621748 TRAV12-1A0A0B4J245 112 aa11.44□□□□□ -0.58
SCAMP4-213ENST00000621748 TINCRA0A1B0GVN0 87 aa11.44□□□□□ -0.58
SCAMP4-213ENST00000621748 H3BRM9 83 aa11.44□□□□□ -0.58
SCAMP4-213ENST00000621748 LINC00242Q5T6M2 205 aa11.44□□□□□ -0.58
SCAMP4-213ENST00000621748 C5orf38Q86SI9 138 aa11.44□□□□□ -0.58
SCAMP4-213ENST00000621748 TMA7Q9Y2S6 64 aaKnown RBP11.44□□□□□ -0.58
SCAMP4-213ENST00000621748 IGHV1-58A0A0C4DH39 117 aa11.43□□□□□ -0.58
SCAMP4-213ENST00000621748 A0A0J9YXV3 536 aa11.43□□□□□ -0.58
SCAMP4-213ENST00000621748 SNRPEP62304 92 aaKnown RBP11.43□□□□□ -0.58
SCAMP4-213ENST00000621748 LINC00469Q8N7U9 141 aa11.43□□□□□ -0.58
SCAMP4-213ENST00000621748 C20orf202A1L168 122 aa11.42□□□□□ -0.58
SCAMP4-213ENST00000621748 KRTAP29-1A8MX34 341 aaPredicted RBP11.42□□□□□ -0.58
SCAMP4-213ENST00000621748 J3QL48 77 aa11.42□□□□□ -0.58
SCAMP4-213ENST00000621748 RPL37AP61513 92 aaKnown RBP11.42□□□□□ -0.58
SCAMP4-213ENST00000621748 COX6A2Q02221 97 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 196.6 ms