RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 ENHOQ6UWT2 76 aa10.78□□□□□ -0.68
CBWD3-216ENST00000621396 C5orf38Q86SI9 138 aa10.78□□□□□ -0.68
CBWD3-216ENST00000621396 MAPKAPK5-AS1Q8N8E1 139 aa10.78□□□□□ -0.68
CBWD3-216ENST00000621396 TMEM223A0PJW6 202 aa10.77□□□□□ -0.68
CBWD3-216ENST00000621396 HERVK_113P63121 156 aa10.76□□□□□ -0.69
CBWD3-216ENST00000621396 NUPR2A6NF83 97 aa10.75□□□□□ -0.69
CBWD3-216ENST00000621396 E9PLD3 99 aa10.75□□□□□ -0.69
CBWD3-216ENST00000621396 COX8AP10176 69 aa10.75□□□□□ -0.69
CBWD3-216ENST00000621396 SIVA1O15304 175 aa10.74□□□□□ -0.69
CBWD3-216ENST00000621396 DDTP30046 118 aa10.74□□□□□ -0.69
CBWD3-216ENST00000621396 SS18Q15532 418 aa10.74□□□□□ -0.69
CBWD3-216ENST00000621396 CHCHD10Q8WYQ3 142 aaPredicted RBP10.74□□□□□ -0.69
CBWD3-216ENST00000621396 KMT2AQ03164 3969 aa10.74□□□□□ -0.69
CBWD3-216ENST00000621396 IGHV3OR16-9A0A0B4J2B5 98 aa10.74□□□□□ -0.69
CBWD3-216ENST00000621396 MIEN1Q9BRT3 115 aa10.74□□□□□ -0.69
CBWD3-216ENST00000621396 Q9HAA7 133 aa10.74□□□□□ -0.69
CBWD3-216ENST00000621396 MRPS16Q9Y3D3 137 aaKnown RBP10.74□□□□□ -0.69
CBWD3-216ENST00000621396 DNAH10Q8IVF4 4471 aa10.73□□□□□ -0.69
CBWD3-216ENST00000621396 LINC01556Q5JQF7 62 aa10.73□□□□□ -0.69
CBWD3-216ENST00000621396 SLC25A34Q6PIV7 304 aa10.73□□□□□ -0.69
CBWD3-216ENST00000621396 Q9H8V8 135 aa10.73□□□□□ -0.69
CBWD3-216ENST00000621396 PRR34Q9NV39 138 aa10.73□□□□□ -0.69
CBWD3-216ENST00000621396 KLK5Q9Y337 293 aaPredicted RBP10.73□□□□□ -0.69
CBWD3-216ENST00000621396 IGLV5-45A0A087WSX0 123 aa10.73□□□□□ -0.69
CBWD3-216ENST00000621396 LINC00587B1AMM8 73 aa10.73□□□□□ -0.69
CBWD3-216ENST00000621396 CRPP02741 224 aa10.73□□□□□ -0.69
CBWD3-216ENST00000621396 FAM19A3Q7Z5A8 133 aa10.73□□□□□ -0.69
CBWD3-216ENST00000621396 UBE2DNLQ8IWF7 75 aa10.73□□□□□ -0.69
CBWD3-216ENST00000621396 UQCR10Q9UDW1 63 aa10.73□□□□□ -0.69
CBWD3-216ENST00000621396 HERVK_113P61574 105 aa10.72□□□□□ -0.69
CBWD3-216ENST00000621396 SMIM1B2RUZ4 78 aa10.72□□□□□ -0.69
CBWD3-216ENST00000621396 SEC11AP67812 179 aa10.72□□□□□ -0.69
CBWD3-216ENST00000621396 J3QQQ9 107 aa10.71□□□□□ -0.69
CBWD3-216ENST00000621396 DNAH10OSP0CZ25 163 aa10.71□□□□□ -0.69
CBWD3-216ENST00000621396 BOD1L2Q8IYS8 172 aa10.71□□□□□ -0.69
CBWD3-216ENST00000621396 IGHV1-58A0A0C4DH39 117 aa10.7□□□□□ -0.7
CBWD3-216ENST00000621396 TOMM7Q9P0U1 55 aa10.7□□□□□ -0.7
CBWD3-216ENST00000621396 MUC7Q8TAX7 377 aa10.7□□□□□ -0.7
CBWD3-216ENST00000621396 GAGE12HA6NDE8 117 aa10.69□□□□□ -0.7
CBWD3-216ENST00000621396 ZNF815PA8K554 130 aa10.69□□□□□ -0.7
CBWD3-216ENST00000621396 H3BRM9 83 aa10.69□□□□□ -0.7
CBWD3-216ENST00000621396 CTAG1AP78358 180 aa10.69□□□□□ -0.7
CBWD3-216ENST00000621396 PLEKHB2Q96CS7 222 aa10.69□□□□□ -0.7
CBWD3-216ENST00000621396 KRTAP1-5Q9BYS1 174 aa10.69□□□□□ -0.7
CBWD3-216ENST00000621396 HNRNPA3P51991 378 aaKnown RBP10.68□□□□□ -0.7
CBWD3-216ENST00000621396 C2orf91Q6ZV80 131 aa10.68□□□□□ -0.7
CBWD3-216ENST00000621396 LEPROTO15243 131 aa10.68□□□□□ -0.7
CBWD3-216ENST00000621396 LGALS3P17931 250 aaKnown RBP10.68□□□□□ -0.7
CBWD3-216ENST00000621396 CD164L2Q6UWJ8 174 aa10.68□□□□□ -0.7
CBWD3-216ENST00000621396 ZNF625Q96I27 306 aaPredicted RBP10.68□□□□□ -0.7
CBWD3-216ENST00000621396 A0A087WZ39 114 aa10.67□□□□□ -0.7
CBWD3-216ENST00000621396 FOXI1Q12951 378 aa10.67□□□□□ -0.7
CBWD3-216ENST00000621396 LINC00526Q96FQ7 95 aa10.67□□□□□ -0.7
CBWD3-216ENST00000621396 UPK3BQ9BT76 320 aa10.67□□□□□ -0.7
CBWD3-216ENST00000621396 IGKV2D-24A0A075B6R9 120 aa10.67□□□□□ -0.7
CBWD3-216ENST00000621396 MYMXA0A1B0GTQ4 84 aa10.67□□□□□ -0.7
CBWD3-216ENST00000621396 IGLV5-39A0A0G2JS06 123 aa10.65□□□□□ -0.7
CBWD3-216ENST00000621396 WWC2-AS2Q96NR7 200 aa10.65□□□□□ -0.7
CBWD3-216ENST00000621396 COX7A2LO14548 114 aa10.65□□□□□ -0.71
CBWD3-216ENST00000621396 MALP21145 153 aa10.65□□□□□ -0.71
CBWD3-216ENST00000621396 MIAQ16674 131 aa10.65□□□□□ -0.71
CBWD3-216ENST00000621396 SCGB1D4Q6XE38 83 aa10.65□□□□□ -0.71
CBWD3-216ENST00000621396 C10orf126Q8N4M7 172 aa10.64□□□□□ -0.71
CBWD3-216ENST00000621396 NDUFA12Q9UI09 145 aa10.64□□□□□ -0.71
CBWD3-216ENST00000621396 A0A0U1RRA0 63 aa10.63□□□□□ -0.71
CBWD3-216ENST00000621396 CASC10Q5T4H9 136 aa10.63□□□□□ -0.71
CBWD3-216ENST00000621396 C1orf43Q9BWL3 253 aa10.63□□□□□ -0.71
CBWD3-216ENST00000621396 KRTAP26-1Q6PEX3 210 aa10.63□□□□□ -0.71
CBWD3-216ENST00000621396 C2orf82Q6UX34 121 aa10.63□□□□□ -0.71
CBWD3-216ENST00000621396 VPS13DQ5THJ4 4388 aa10.62□□□□□ -0.71
CBWD3-216ENST00000621396 IBA57-AS1B1ANH7 110 aa10.62□□□□□ -0.71
CBWD3-216ENST00000621396 M0R2N4 97 aa10.62□□□□□ -0.71
CBWD3-216ENST00000621396 BATFQ16520 125 aa10.62□□□□□ -0.71
CBWD3-216ENST00000621396 TRAV8-4A0A0B4J246 113 aa10.62□□□□□ -0.71
CBWD3-216ENST00000621396 DLEU1O43261 78 aa10.62□□□□□ -0.71
CBWD3-216ENST00000621396 HINT1P49773 126 aaPredicted RBP10.62□□□□□ -0.71
CBWD3-216ENST00000621396 COX7B2Q8TF08 81 aa10.62□□□□□ -0.71
CBWD3-216ENST00000621396 C6orf223Q8N319 242 aa10.61□□□□□ -0.71
CBWD3-216ENST00000621396 ORAOV1Q8WV07 137 aa10.61□□□□□ -0.71
CBWD3-216ENST00000621396 C6orf226Q5I0X4 101 aa10.6□□□□□ -0.71
CBWD3-216ENST00000621396 HIGD2BQ4VC39 106 aa10.59□□□□□ -0.71
CBWD3-216ENST00000621396 DAND5Q8N907 189 aa10.59□□□□□ -0.71
CBWD3-216ENST00000621396 A0A0J9YXY3 114 aa10.59□□□□□ -0.71
CBWD3-216ENST00000621396 LECT2O14960 151 aa10.59□□□□□ -0.71
CBWD3-216ENST00000621396 K7EP13 123 aa10.58□□□□□ -0.72
CBWD3-216ENST00000621396 EREGO14944 169 aa10.57□□□□□ -0.72
CBWD3-216ENST00000621396 NPC2P61916 151 aa10.57□□□□□ -0.72
CBWD3-216ENST00000621396 LY6G6CO95867 125 aa10.57□□□□□ -0.72
CBWD3-216ENST00000621396 KIAA0087Q14695 138 aa10.57□□□□□ -0.72
CBWD3-216ENST00000621396 ADAMTSL4-AS1Q5T5F5 129 aa10.57□□□□□ -0.72
CBWD3-216ENST00000621396 SNHG12Q9BXW3 62 aa10.57□□□□□ -0.72
CBWD3-216ENST00000621396 PRSS2P07478 247 aa10.56□□□□□ -0.72
CBWD3-216ENST00000621396 NDUFA1O15239 70 aa10.56□□□□□ -0.72
CBWD3-216ENST00000621396 HIST1H4GQ99525 98 aa10.56□□□□□ -0.72
CBWD3-216ENST00000621396 NBDYA0A0U1RRE5 68 aa10.55□□□□□ -0.72
CBWD3-216ENST00000621396 SPAG11BQ08648 103 aa10.55□□□□□ -0.72
CBWD3-216ENST00000621396 SRSF9Q13242 221 aaKnown RBP eCLIP10.55□□□□□ -0.72
CBWD3-216ENST00000621396 C9orf116Q5BN46 136 aaPredicted RBP10.55□□□□□ -0.72
CBWD3-216ENST00000621396 C10orf25Q5T742 122 aa10.55□□□□□ -0.72
CBWD3-216ENST00000621396 C15orf56Q8N910 161 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms