RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 HTN3P15516 51 aa9.99□□□□□ -0.81
CNTNAP3B-215ENST00000619138 LITAFQ99732 161 aa9.99□□□□□ -0.81
CNTNAP3B-215ENST00000619138 COX6A2Q02221 97 aa9.99□□□□□ -0.81
CNTNAP3B-215ENST00000619138 S100A7L2Q5SY68 101 aa9.99□□□□□ -0.81
CNTNAP3B-215ENST00000619138 CLPSL2Q6UWE3 100 aa9.99□□□□□ -0.81
CNTNAP3B-215ENST00000619138 A0A0J9YX75 114 aa9.99□□□□□ -0.81
CNTNAP3B-215ENST00000619138 A0A0U1RQV1 116 aa9.99□□□□□ -0.81
CNTNAP3B-215ENST00000619138 A6NDX4 124 aa9.99□□□□□ -0.81
CNTNAP3B-215ENST00000619138 LINC00308Q8TCZ7 52 aa9.99□□□□□ -0.81
CNTNAP3B-215ENST00000619138 USMG5Q96IX5 58 aa9.99□□□□□ -0.81
CNTNAP3B-215ENST00000619138 TRBV6-5A0A0K0K1A5 114 aa9.98□□□□□ -0.81
CNTNAP3B-215ENST00000619138 TIRAPP58753 221 aa9.98□□□□□ -0.81
CNTNAP3B-215ENST00000619138 FAM19A5Q7Z5A7 132 aaPredicted RBP9.98□□□□□ -0.81
CNTNAP3B-215ENST00000619138 APRG1Q8IVJ8 170 aa9.98□□□□□ -0.81
CNTNAP3B-215ENST00000619138 C3orf22Q8N5N4 141 aa9.98□□□□□ -0.81
CNTNAP3B-215ENST00000619138 NBEAL2Q6ZNJ1 2754 aa9.98□□□□□ -0.81
CNTNAP3B-215ENST00000619138 A0A096LNT2 108 aa9.98□□□□□ -0.81
CNTNAP3B-215ENST00000619138 DCANP1Q8TF63 244 aa9.98□□□□□ -0.81
CNTNAP3B-215ENST00000619138 TRGV2A0A075B6R0 118 aa9.97□□□□□ -0.81
CNTNAP3B-215ENST00000619138 RPL36AP83881 106 aaKnown RBP9.97□□□□□ -0.81
CNTNAP3B-215ENST00000619138 RPL36ALQ969Q0 106 aaKnown RBP9.97□□□□□ -0.81
CNTNAP3B-215ENST00000619138 SMR3AQ99954 134 aa9.97□□□□□ -0.81
CNTNAP3B-215ENST00000619138 MRAPQ8TCY5 172 aa9.97□□□□□ -0.81
CNTNAP3B-215ENST00000619138 CITED2Q99967 270 aaPredicted RBP9.97□□□□□ -0.81
CNTNAP3B-215ENST00000619138 RPL35AP18077 110 aaKnown RBP9.96□□□□□ -0.81
CNTNAP3B-215ENST00000619138 C9orf85Q96MD7 179 aa9.96□□□□□ -0.81
CNTNAP3B-215ENST00000619138 MRPS36P82909 103 aaKnown RBP9.96□□□□□ -0.82
CNTNAP3B-215ENST00000619138 C20orf197Q8N268 126 aa9.96□□□□□ -0.82
CNTNAP3B-215ENST00000619138 CR1P17927 2039 aa9.96□□□□□ -0.82
CNTNAP3B-215ENST00000619138 LECT2O14960 151 aa9.95□□□□□ -0.82
CNTNAP3B-215ENST00000619138 LINC00643Q86TS7 51 aa9.95□□□□□ -0.82
CNTNAP3B-215ENST00000619138 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.95□□□□□ -0.82
CNTNAP3B-215ENST00000619138 LAMTOR3Q9UHA4 124 aa9.95□□□□□ -0.82
CNTNAP3B-215ENST00000619138 COX7A2LO14548 114 aa9.95□□□□□ -0.82
CNTNAP3B-215ENST00000619138 C5orf38Q86SI9 138 aa9.95□□□□□ -0.82
CNTNAP3B-215ENST00000619138 SETXQ7Z333 2677 aaKnown RBP9.95□□□□□ -0.82
CNTNAP3B-215ENST00000619138 A0A096LPF7 62 aa9.95□□□□□ -0.82
CNTNAP3B-215ENST00000619138 FAM218AQ96MZ4 157 aa9.95□□□□□ -0.82
CNTNAP3B-215ENST00000619138 NCR3O14931 201 aa9.94□□□□□ -0.82
CNTNAP3B-215ENST00000619138 IGHG2P01859 326 aa9.94□□□□□ -0.82
CNTNAP3B-215ENST00000619138 RBMY1A1P0DJD3 496 aaKnown RBP9.94□□□□□ -0.82
CNTNAP3B-215ENST00000619138 RBMY1CP0DJD4 496 aa9.94□□□□□ -0.82
CNTNAP3B-215ENST00000619138 RBMY1FQ15415 496 aaKnown RBP9.94□□□□□ -0.82
CNTNAP3B-215ENST00000619138 KRTAP1-3Q8IUG1 177 aa9.94□□□□□ -0.82
CNTNAP3B-215ENST00000619138 SPANXDQ9BXN6 97 aa9.94□□□□□ -0.82
CNTNAP3B-215ENST00000619138 SPANXCQ9NY87 97 aa9.94□□□□□ -0.82
CNTNAP3B-215ENST00000619138 UQCRQO14949 82 aa9.93□□□□□ -0.82
CNTNAP3B-215ENST00000619138 KIR2DL5BQ8NHK3 375 aa9.93□□□□□ -0.82
CNTNAP3B-215ENST00000619138 FAM19A4Q96LR4 140 aa9.93□□□□□ -0.82
CNTNAP3B-215ENST00000619138 UBE2D4Q9Y2X8 147 aa9.93□□□□□ -0.82
CNTNAP3B-215ENST00000619138 C6orf226Q5I0X4 101 aa9.93□□□□□ -0.82
CNTNAP3B-215ENST00000619138 SOSTDC1Q6X4U4 206 aa9.93□□□□□ -0.82
CNTNAP3B-215ENST00000619138 INAFM2P0DMQ5 153 aa9.93□□□□□ -0.82
CNTNAP3B-215ENST00000619138 CSDC2Q9Y534 153 aaKnown RBP9.92□□□□□ -0.82
CNTNAP3B-215ENST00000619138 C5orf47Q569G3 176 aa9.92□□□□□ -0.82
CNTNAP3B-215ENST00000619138 SMIM9A6NGZ8 99 aa9.91□□□□□ -0.82
CNTNAP3B-215ENST00000619138 DAD1P61803 113 aa9.91□□□□□ -0.82
CNTNAP3B-215ENST00000619138 RBM3P98179 157 aaKnown RBP9.91□□□□□ -0.82
CNTNAP3B-215ENST00000619138 MIR7-3HGQ8N6C7 128 aa9.91□□□□□ -0.82
CNTNAP3B-215ENST00000619138 SLURP1P55000 103 aa9.91□□□□□ -0.82
CNTNAP3B-215ENST00000619138 Q6YL49 198 aa9.91□□□□□ -0.82
CNTNAP3B-215ENST00000619138 TMEM243Q9BU79 118 aa9.91□□□□□ -0.82
CNTNAP3B-215ENST00000619138 CHCHD7Q9BUK0 85 aa9.91□□□□□ -0.82
CNTNAP3B-215ENST00000619138 NBPF19A0A087WUL8 3843 aa9.9□□□□□ -0.82
CNTNAP3B-215ENST00000619138 TRBV7-7A0A0K0K1E9 115 aa9.9□□□□□ -0.82
CNTNAP3B-215ENST00000619138 SPANXA1Q9NS26 97 aa9.9□□□□□ -0.82
CNTNAP3B-215ENST00000619138 ZNF415Q09FC8 603 aa9.9□□□□□ -0.83
CNTNAP3B-215ENST00000619138 RBMY1BA6NDE4 496 aaKnown RBP9.89□□□□□ -0.83
CNTNAP3B-215ENST00000619138 RBMY1EA6NEQ0 496 aaKnown RBP9.89□□□□□ -0.83
CNTNAP3B-215ENST00000619138 RBMY1DP0C7P1 496 aaKnown RBP9.89□□□□□ -0.83
CNTNAP3B-215ENST00000619138 NOTCH1P46531 2555 aa9.89□□□□□ -0.83
CNTNAP3B-215ENST00000619138 ACYP1P07311 99 aa9.89□□□□□ -0.83
CNTNAP3B-215ENST00000619138 MALP21145 153 aa9.89□□□□□ -0.83
CNTNAP3B-215ENST00000619138 SND1-IT1Q9HBX3 110 aa9.89□□□□□ -0.83
CNTNAP3B-215ENST00000619138 FAM240AA0A1B0GVK7 77 aa9.89□□□□□ -0.83
CNTNAP3B-215ENST00000619138 NF1P21359 2839 aa9.88□□□□□ -0.83
CNTNAP3B-215ENST00000619138 K7EQG2 157 aa9.88□□□□□ -0.83
CNTNAP3B-215ENST00000619138 C18orf65Q6ZTR6 163 aa9.88□□□□□ -0.83
CNTNAP3B-215ENST00000619138 PF4P02776 101 aa9.88□□□□□ -0.83
CNTNAP3B-215ENST00000619138 C9orf129Q5T035 196 aaKnown RBP9.88□□□□□ -0.83
CNTNAP3B-215ENST00000619138 DNAJC30Q96LL9 226 aa9.88□□□□□ -0.83
CNTNAP3B-215ENST00000619138 NDUFA1O15239 70 aa9.88□□□□□ -0.83
CNTNAP3B-215ENST00000619138 COX7CP15954 63 aa9.88□□□□□ -0.83
CNTNAP3B-215ENST00000619138 SCXQ7RTU7 201 aa9.88□□□□□ -0.83
CNTNAP3B-215ENST00000619138 COPS9Q8WXC6 57 aa9.88□□□□□ -0.83
CNTNAP3B-215ENST00000619138 MXRA5Q9NR99 2828 aa9.87□□□□□ -0.83
CNTNAP3B-215ENST00000619138 ATOX1O00244 68 aa9.87□□□□□ -0.83
CNTNAP3B-215ENST00000619138 GHRHP01286 108 aa9.87□□□□□ -0.83
CNTNAP3B-215ENST00000619138 LINC00242Q5T6M2 205 aa9.87□□□□□ -0.83
CNTNAP3B-215ENST00000619138 A0A087WYN8 130 aa9.87□□□□□ -0.83
CNTNAP3B-215ENST00000619138 CYSTM1Q9H1C7 97 aa9.87□□□□□ -0.83
CNTNAP3B-215ENST00000619138 TRGV4A0A0C4DH28 118 aa9.87□□□□□ -0.83
CNTNAP3B-215ENST00000619138 F5H768 121 aa9.87□□□□□ -0.83
CNTNAP3B-215ENST00000619138 C4orf26Q17RF5 130 aa9.87□□□□□ -0.83
CNTNAP3B-215ENST00000619138 PYGO1Q9Y3Y4 419 aa9.87□□□□□ -0.83
CNTNAP3B-215ENST00000619138 FAM104AQ969W3 186 aa9.86□□□□□ -0.83
CNTNAP3B-215ENST00000619138 SNURFQ9Y675 71 aa9.86□□□□□ -0.83
CNTNAP3B-215ENST00000619138 DEFB130BP0DP73 79 aa9.86□□□□□ -0.83
CNTNAP3B-215ENST00000619138 DEFB130AP0DP74 79 aa9.86□□□□□ -0.83
CNTNAP3B-215ENST00000619138 MPLKIPQ8TAP9 179 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms