RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 NDUFA5Q16718 116 aa5.3□□□□□ -1.56
NEK3-209ENST00000618856 KIAA1644Q3SXP7 199 aa5.3□□□□□ -1.56
NEK3-209ENST00000618856 RNASE13Q5GAN3 156 aaKnown RBP5.3□□□□□ -1.56
NEK3-209ENST00000618856 FAM19A3Q7Z5A8 133 aa5.3□□□□□ -1.56
NEK3-209ENST00000618856 OPRPNQ99935 248 aaPredicted RBP5.3□□□□□ -1.56
NEK3-209ENST00000618856 CHAC1Q9BUX1 264 aa5.3□□□□□ -1.56
NEK3-209ENST00000618856 FAT3Q8TDW7 4589 aa5.29□□□□□ -1.56
NEK3-209ENST00000618856 TGIF2-C20orf24A0A0A6YYL0 155 aa5.29□□□□□ -1.56
NEK3-209ENST00000618856 C2orf66Q6UXQ4 117 aa5.29□□□□□ -1.56
NEK3-209ENST00000618856 SCXQ7RTU7 201 aa5.29□□□□□ -1.56
NEK3-209ENST00000618856 AMELXQ99217 191 aa5.29□□□□□ -1.56
NEK3-209ENST00000618856 MRPL18Q9H0U6 180 aaKnown RBP5.29□□□□□ -1.56
NEK3-209ENST00000618856 CYSLTR1Q9Y271 337 aa5.29□□□□□ -1.56
NEK3-209ENST00000618856 KRTAP9-6A0A140TA67 174 aa5.28□□□□□ -1.56
NEK3-209ENST00000618856 PANO1I0J062 215 aa5.28□□□□□ -1.56
NEK3-209ENST00000618856 HAMPP81172 84 aa5.28□□□□□ -1.56
NEK3-209ENST00000618856 LINC00173Q6ZV60 143 aa5.28□□□□□ -1.56
NEK3-209ENST00000618856 CIRBP-AS1Q8TBR5 109 aa5.28□□□□□ -1.56
NEK3-209ENST00000618856 TOMM6Q96B49 74 aa5.28□□□□□ -1.56
NEK3-209ENST00000618856 TMEM141Q96I45 108 aa5.28□□□□□ -1.56
NEK3-209ENST00000618856 TIMM17AQ99595 171 aa5.28□□□□□ -1.56
NEK3-209ENST00000618856 HERC1Q15751 4861 aa5.28□□□□□ -1.56
NEK3-209ENST00000618856 IGHV3-64A0A075B6Q5 118 aa5.27□□□□□ -1.57
NEK3-209ENST00000618856 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.27□□□□□ -1.57
NEK3-209ENST00000618856 TRAV13-1A0A0B4J241 112 aa5.27□□□□□ -1.57
NEK3-209ENST00000618856 EPM2AB3EWF7 344 aa5.27□□□□□ -1.57
NEK3-209ENST00000618856 COX7A2LO14548 114 aa5.27□□□□□ -1.57
NEK3-209ENST00000618856 G0S2P27469 103 aa5.27□□□□□ -1.57
NEK3-209ENST00000618856 UBE2D1P51668 147 aa5.27□□□□□ -1.57
NEK3-209ENST00000618856 KRTAP10-4P60372 401 aaPredicted RBP5.27□□□□□ -1.57
NEK3-209ENST00000618856 FABP9Q0Z7S8 132 aa5.27□□□□□ -1.57
NEK3-209ENST00000618856 HIGD2BQ4VC39 106 aa5.27□□□□□ -1.57
NEK3-209ENST00000618856 LINC00242Q5T6M2 205 aa5.27□□□□□ -1.57
NEK3-209ENST00000618856 SLC7A5P1Q8MH63 180 aa5.27□□□□□ -1.57
NEK3-209ENST00000618856 LINC01561Q8N1V8 128 aa5.27□□□□□ -1.57
NEK3-209ENST00000618856 URB1-AS1Q96HZ7 61 aa5.27□□□□□ -1.57
NEK3-209ENST00000618856 AP5S1Q9NUS5 200 aa5.27□□□□□ -1.57
NEK3-209ENST00000618856 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.27□□□□□ -1.57
NEK3-209ENST00000618856 A0A087WZ39 114 aa5.26□□□□□ -1.57
NEK3-209ENST00000618856 LINC01549A6NIU2 74 aa5.26□□□□□ -1.57
NEK3-209ENST00000618856 IFITM10A6NMD0 228 aa5.26□□□□□ -1.57
NEK3-209ENST00000618856 SMR3BP02814 79 aaPredicted RBP5.26□□□□□ -1.57
NEK3-209ENST00000618856 C21orf62-AS1Q17RA5 79 aa5.26□□□□□ -1.57
NEK3-209ENST00000618856 Q5VSD8 79 aa5.26□□□□□ -1.57
NEK3-209ENST00000618856 ERASQ7Z444 233 aa5.26□□□□□ -1.57
NEK3-209ENST00000618856 OR10D4PQ8NGN7 298 aa5.26□□□□□ -1.57
NEK3-209ENST00000618856 PRSS3P2Q8NHM4 247 aa5.26□□□□□ -1.57
NEK3-209ENST00000618856 SPACA4Q8TDM5 124 aa5.26□□□□□ -1.57
NEK3-209ENST00000618856 C2orf48Q96LS8 159 aa5.26□□□□□ -1.57
NEK3-209ENST00000618856 LRP1Q07954 4544 aaKnown RBP5.25□□□□□ -1.57
NEK3-209ENST00000618856 A0A096LNJ9 63 aa5.25□□□□□ -1.57
NEK3-209ENST00000618856 F8WDY8 70 aa5.25□□□□□ -1.57
NEK3-209ENST00000618856 COX6A2Q02221 97 aa5.25□□□□□ -1.57
NEK3-209ENST00000618856 TEX43Q6ZNM6 134 aa5.25□□□□□ -1.57
NEK3-209ENST00000618856 C5orf38Q86SI9 138 aa5.25□□□□□ -1.57
NEK3-209ENST00000618856 C18orf32Q8TCD1 76 aa5.25□□□□□ -1.57
NEK3-209ENST00000618856 TRAPPC1Q9Y5R8 145 aa5.25□□□□□ -1.57
NEK3-209ENST00000618856 IGLV4-69A0A075B6H9 119 aa5.24□□□□□ -1.57
NEK3-209ENST00000618856 FAM229AH3BQW9 127 aa5.24□□□□□ -1.57
NEK3-209ENST00000618856 ZNF561-AS1K7EIQ3 104 aa5.24□□□□□ -1.57
NEK3-209ENST00000618856 APOMO95445 188 aa5.24□□□□□ -1.57
NEK3-209ENST00000618856 SYCNQ0VAF6 134 aa5.24□□□□□ -1.57
NEK3-209ENST00000618856 KIAA0087Q14695 138 aa5.24□□□□□ -1.57
NEK3-209ENST00000618856 RNF151Q2KHN1 245 aa5.24□□□□□ -1.57
NEK3-209ENST00000618856 PAPPA-AS1Q5QFB9 102 aa5.24□□□□□ -1.57
NEK3-209ENST00000618856 ZC2HC1BQ5TFG8 222 aa5.24□□□□□ -1.57
NEK3-209ENST00000618856 LINC00526Q96FQ7 95 aa5.24□□□□□ -1.57
NEK3-209ENST00000618856 VCX2Q9H322 139 aa5.24□□□□□ -1.57
NEK3-209ENST00000618856 SMCO4Q9NRQ5 59 aa5.24□□□□□ -1.57
NEK3-209ENST00000618856 PLAC8Q9NZF1 115 aa5.24□□□□□ -1.57
NEK3-209ENST00000618856 MALP21145 153 aa5.23□□□□□ -1.57
NEK3-209ENST00000618856 Q6ZN92 141 aa5.23□□□□□ -1.57
NEK3-209ENST00000618856 CBLN2Q8IUK8 224 aa5.23□□□□□ -1.57
NEK3-209ENST00000618856 CARD19Q96LW7 228 aa5.23□□□□□ -1.57
NEK3-209ENST00000618856 C2orf88Q9BSF0 95 aa5.23□□□□□ -1.57
NEK3-209ENST00000618856 IGLV5-45A0A087WSX0 123 aa5.22□□□□□ -1.57
NEK3-209ENST00000618856 A0A096LNI7 61 aa5.22□□□□□ -1.57
NEK3-209ENST00000618856 LINC00614P0C842 121 aa5.22□□□□□ -1.57
NEK3-209ENST00000618856 CHTF8P0CG12 524 aa5.22□□□□□ -1.57
NEK3-209ENST00000618856 SPAG11BQ08648 103 aa5.22□□□□□ -1.57
NEK3-209ENST00000618856 PDZD11Q5EBL8 140 aa5.22□□□□□ -1.57
NEK3-209ENST00000618856 Q6ZRU5 148 aa5.22□□□□□ -1.57
NEK3-209ENST00000618856 FA2HQ7L5A8 372 aa5.22□□□□□ -1.57
NEK3-209ENST00000618856 SCGB3A1Q96QR1 104 aa5.22□□□□□ -1.57
NEK3-209ENST00000618856 MRPL35Q9NZE8 188 aaKnown RBP5.22□□□□□ -1.57
NEK3-209ENST00000618856 PKIGQ9Y2B9 76 aa5.22□□□□□ -1.57
NEK3-209ENST00000618856 A0A087WYN8 130 aa5.21□□□□□ -1.58
NEK3-209ENST00000618856 COLCA2A8K830 154 aa5.21□□□□□ -1.58
NEK3-209ENST00000618856 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.21□□□□□ -1.58
NEK3-209ENST00000618856 TLX1NBP0CAT3 122 aa5.21□□□□□ -1.58
NEK3-209ENST00000618856 HERVK_113P63121 156 aa5.21□□□□□ -1.58
NEK3-209ENST00000618856 SEC11AP67812 179 aa5.21□□□□□ -1.58
NEK3-209ENST00000618856 ORAOV1Q8WV07 137 aa5.21□□□□□ -1.58
NEK3-209ENST00000618856 CAMK2N2Q96S95 79 aa5.21□□□□□ -1.58
NEK3-209ENST00000618856 CST9LQ9H4G1 147 aa5.21□□□□□ -1.58
NEK3-209ENST00000618856 LINC00474Q9P2X8 69 aa5.21□□□□□ -1.58
NEK3-209ENST00000618856 TINCRA0A1B0GVN0 87 aa5.2□□□□□ -1.58
NEK3-209ENST00000618856 PLA2G1BP04054 148 aaKnown RBP5.2□□□□□ -1.58
NEK3-209ENST00000618856 INAFM2P0DMQ5 153 aa5.2□□□□□ -1.58
NEK3-209ENST00000618856 PTTG1IPP53801 180 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms