RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 SRRM2Q9UQ35 2752 aaKnown RBP16.1■□□□□ 0.17
PMS1-220ENST00000618056 HSBP1O75506 76 aa16.1■□□□□ 0.17
PMS1-220ENST00000618056 FOXI1Q12951 378 aa16.1■□□□□ 0.17
PMS1-220ENST00000618056 PRSS47A8MTI9 375 aa16.09■□□□□ 0.17
PMS1-220ENST00000618056 CHCHD1Q96BP2 118 aaKnown RBP16.09■□□□□ 0.17
PMS1-220ENST00000618056 AP5S1Q9NUS5 200 aa16.09■□□□□ 0.17
PMS1-220ENST00000618056 CCL25O15444 150 aa16.08■□□□□ 0.16
PMS1-220ENST00000618056 JOSD1Q15040 202 aaPredicted RBP16.08■□□□□ 0.16
PMS1-220ENST00000618056 SS18Q15532 418 aa16.08■□□□□ 0.16
PMS1-220ENST00000618056 CHAC1Q9BUX1 264 aa16.08■□□□□ 0.16
PMS1-220ENST00000618056 XCL1P47992 114 aa16.07■□□□□ 0.16
PMS1-220ENST00000618056 SCXQ7RTU7 201 aa16.07■□□□□ 0.16
PMS1-220ENST00000618056 FAM229AH3BQW9 127 aa16.05■□□□□ 0.16
PMS1-220ENST00000618056 SLPIP03973 132 aa16.05■□□□□ 0.16
PMS1-220ENST00000618056 RPL39P62891 51 aaKnown RBP16.05■□□□□ 0.16
PMS1-220ENST00000618056 CD164L2Q6UWJ8 174 aa16.05■□□□□ 0.16
PMS1-220ENST00000618056 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.04■□□□□ 0.16
PMS1-220ENST00000618056 URB1-AS1Q96HZ7 61 aa16.04■□□□□ 0.16
PMS1-220ENST00000618056 GVQW2A0A096LPI5 108 aaPredicted RBP16.03■□□□□ 0.16
PMS1-220ENST00000618056 LINC00614P0C842 121 aa16.03■□□□□ 0.16
PMS1-220ENST00000618056 Q6ZUT4 128 aa16.03■□□□□ 0.16
PMS1-220ENST00000618056 MAP1LC3AQ9H492 121 aa16.03■□□□□ 0.16
PMS1-220ENST00000618056 SPANXA1Q9NS26 97 aa16.03■□□□□ 0.16
PMS1-220ENST00000618056 SDIM1Q6ZPB5 146 aa16.03■□□□□ 0.16
PMS1-220ENST00000618056 FA2HQ7L5A8 372 aa16.03■□□□□ 0.16
PMS1-220ENST00000618056 FAM19A2Q8N3H0 131 aa16.03■□□□□ 0.16
PMS1-220ENST00000618056 RNASE13Q5GAN3 156 aaKnown RBP16.02■□□□□ 0.15
PMS1-220ENST00000618056 CIRBP-AS1Q8TBR5 109 aa16.02■□□□□ 0.15
PMS1-220ENST00000618056 PRSS3P2Q8NHM4 247 aa16.01■□□□□ 0.15
PMS1-220ENST00000618056 FAM104AQ969W3 186 aa16.01■□□□□ 0.15
PMS1-220ENST00000618056 MRPS36P82909 103 aaKnown RBP16■□□□□ 0.15
PMS1-220ENST00000618056 HIGD2BQ4VC39 106 aa16■□□□□ 0.15
PMS1-220ENST00000618056 IGHV3-64A0A075B6Q5 118 aa15.99■□□□□ 0.15
PMS1-220ENST00000618056 IGHV1-58A0A0C4DH39 117 aa15.99■□□□□ 0.15
PMS1-220ENST00000618056 LOC389332A0A1B0GUA5 103 aa15.99■□□□□ 0.15
PMS1-220ENST00000618056 SCGB1D1O95968 90 aa15.99■□□□□ 0.15
PMS1-220ENST00000618056 Q8N8P6 123 aa15.99■□□□□ 0.15
PMS1-220ENST00000618056 TRAV13-1A0A0B4J241 112 aa15.97■□□□□ 0.15
PMS1-220ENST00000618056 KRTDAPP60985 99 aa15.97■□□□□ 0.15
PMS1-220ENST00000618056 LINC00528Q8N1L1 170 aa15.97■□□□□ 0.15
PMS1-220ENST00000618056 PYGO1Q9Y3Y4 419 aa15.97■□□□□ 0.15
PMS1-220ENST00000618056 PCP4L1A6NKN8 68 aa15.96■□□□□ 0.14
PMS1-220ENST00000618056 K7EMI3 77 aa15.96■□□□□ 0.14
PMS1-220ENST00000618056 IFI27P40305 119 aaPredicted RBP15.96■□□□□ 0.14
PMS1-220ENST00000618056 S100A12P80511 92 aa15.96■□□□□ 0.14
PMS1-220ENST00000618056 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.96■□□□□ 0.14
PMS1-220ENST00000618056 FLG2Q5D862 2391 aaPredicted RBP15.95■□□□□ 0.14
PMS1-220ENST00000618056 CIRBPQ14011 172 aaKnown RBP15.95■□□□□ 0.14
PMS1-220ENST00000618056 PMCHL1Q16048 86 aa15.95■□□□□ 0.14
PMS1-220ENST00000618056 COX7A2LO14548 114 aa15.94■□□□□ 0.14
PMS1-220ENST00000618056 INAFM2P0DMQ5 153 aa15.94■□□□□ 0.14
PMS1-220ENST00000618056 OPRPNQ99935 248 aaPredicted RBP15.94■□□□□ 0.14
PMS1-220ENST00000618056 NXT2Q9NPJ8 142 aaKnown RBP15.94■□□□□ 0.14
PMS1-220ENST00000618056 PANO1I0J062 215 aa15.92■□□□□ 0.14
PMS1-220ENST00000618056 LEPROTL1O95214 131 aa15.92■□□□□ 0.14
PMS1-220ENST00000618056 PLA2G1BP04054 148 aaKnown RBP15.92■□□□□ 0.14
PMS1-220ENST00000618056 C3orf79P0CE67 100 aa15.92■□□□□ 0.14
PMS1-220ENST00000618056 ORMDL2Q53FV1 153 aa15.92■□□□□ 0.14
PMS1-220ENST00000618056 MALP21145 153 aa15.91■□□□□ 0.14
PMS1-220ENST00000618056 HSPB8Q9UJY1 196 aa15.91■□□□□ 0.14
PMS1-220ENST00000618056 CYSLTR1Q9Y271 337 aa15.91■□□□□ 0.14
PMS1-220ENST00000618056 ZNF561-AS1K7EIQ3 104 aa15.9■□□□□ 0.14
PMS1-220ENST00000618056 C2orf66Q6UXQ4 117 aa15.9■□□□□ 0.14
PMS1-220ENST00000618056 MYCBP2O75592 4640 aa15.89■□□□□ 0.13
PMS1-220ENST00000618056 IGLV4-3A0A075B6K6 122 aa15.89■□□□□ 0.13
PMS1-220ENST00000618056 LINC00526Q96FQ7 95 aa15.89■□□□□ 0.13
PMS1-220ENST00000618056 COX6A2Q02221 97 aa15.88■□□□□ 0.13
PMS1-220ENST00000618056 C5orf38Q86SI9 138 aa15.88■□□□□ 0.13
PMS1-220ENST00000618056 TMEM141Q96I45 108 aa15.88■□□□□ 0.13
PMS1-220ENST00000618056 IGHV3OR16-9A0A0B4J2B5 98 aa15.87■□□□□ 0.13
PMS1-220ENST00000618056 LINC01546A6NGU7 62 aa15.87■□□□□ 0.13
PMS1-220ENST00000618056 SPACA4Q8TDM5 124 aa15.87■□□□□ 0.13
PMS1-220ENST00000618056 APOMO95445 188 aa15.86■□□□□ 0.13
PMS1-220ENST00000618056 HBDP02042 147 aa15.86■□□□□ 0.13
PMS1-220ENST00000618056 NPSP0C0P6 89 aa15.86■□□□□ 0.13
PMS1-220ENST00000618056 TEX43Q6ZNM6 134 aa15.86■□□□□ 0.13
PMS1-220ENST00000618056 CARD19Q96LW7 228 aa15.86■□□□□ 0.13
PMS1-220ENST00000618056 CHTF8P0CG12 524 aa15.84■□□□□ 0.13
PMS1-220ENST00000618056 G0S2P27469 103 aa15.84■□□□□ 0.13
PMS1-220ENST00000618056 SYCNQ0VAF6 134 aa15.84■□□□□ 0.13
PMS1-220ENST00000618056 MAP1LC3CQ9BXW4 147 aa15.84■□□□□ 0.13
PMS1-220ENST00000618056 IGLV4-69A0A075B6H9 119 aa15.84■□□□□ 0.13
PMS1-220ENST00000618056 TSTD3H0UI37 97 aa15.84■□□□□ 0.13
PMS1-220ENST00000618056 PKIGQ9Y2B9 76 aa15.84■□□□□ 0.13
PMS1-220ENST00000618056 A0A096LNJ9 63 aa15.83■□□□□ 0.12
PMS1-220ENST00000618056 C20orf202A1L168 122 aa15.83■□□□□ 0.12
PMS1-220ENST00000618056 IGIPA6NJ69 53 aa15.83■□□□□ 0.12
PMS1-220ENST00000618056 KRTAP10-4P60372 401 aaPredicted RBP15.83■□□□□ 0.12
PMS1-220ENST00000618056 LINC00173Q6ZV60 143 aa15.83■□□□□ 0.12
PMS1-220ENST00000618056 C2orf48Q96LS8 159 aa15.82■□□□□ 0.12
PMS1-220ENST00000618056 DMBT1Q9UGM3 2413 aaPredicted RBP15.81■□□□□ 0.12
PMS1-220ENST00000618056 A0A087WYN8 130 aa15.81■□□□□ 0.12
PMS1-220ENST00000618056 SYS1-DBNDD2H3BUS1 97 aa15.81■□□□□ 0.12
PMS1-220ENST00000618056 Q6ZN92 141 aa15.81■□□□□ 0.12
PMS1-220ENST00000618056 DPH3Q96FX2 82 aa15.81■□□□□ 0.12
PMS1-220ENST00000618056 AMELXQ99217 191 aa15.81■□□□□ 0.12
PMS1-220ENST00000618056 VAMP8Q9BV40 100 aa15.81■□□□□ 0.12
PMS1-220ENST00000618056 LINC00242Q5T6M2 205 aa15.8■□□□□ 0.12
PMS1-220ENST00000618056 PET117Q6UWS5 81 aa15.8■□□□□ 0.12
PMS1-220ENST00000618056 C2orf88Q9BSF0 95 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms