RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 RNASE13Q5GAN3 156 aaKnown RBP2.4□□□□□ -2.02
LPP-220ENST00000617246 WFDC1Q9HC57 220 aa2.4□□□□□ -2.02
LPP-220ENST00000617246 ATOX1O00244 68 aa2.4□□□□□ -2.02
LPP-220ENST00000617246 C11orf86A6NJI1 115 aa2.4□□□□□ -2.03
LPP-220ENST00000617246 MIR7-3HGQ8N6C7 128 aa2.4□□□□□ -2.03
LPP-220ENST00000617246 IGLV1-50A0A075B6I6 118 aa2.4□□□□□ -2.03
LPP-220ENST00000617246 LYPD5Q6UWN5 251 aa2.4□□□□□ -2.03
LPP-220ENST00000617246 CFAP126Q5VTH2 177 aa2.4□□□□□ -2.03
LPP-220ENST00000617246 BRWD1-AS2P59051 145 aa2.4□□□□□ -2.03
LPP-220ENST00000617246 PPDPFLQ8WWR9 84 aa2.4□□□□□ -2.03
LPP-220ENST00000617246 LINC01561Q8N1V8 128 aa2.4□□□□□ -2.03
LPP-220ENST00000617246 SNURFQ9Y675 71 aa2.4□□□□□ -2.03
LPP-220ENST00000617246 CSDC2Q9Y534 153 aaKnown RBP2.4□□□□□ -2.03
LPP-220ENST00000617246 ODF3L2Q3SX64 289 aa2.4□□□□□ -2.03
LPP-220ENST00000617246 IGLC6P0CF74 106 aa2.4□□□□□ -2.03
LPP-220ENST00000617246 Q8N814 137 aa2.4□□□□□ -2.03
LPP-220ENST00000617246 FLG2Q5D862 2391 aaPredicted RBP2.4□□□□□ -2.03
LPP-220ENST00000617246 FXYD5Q96DB9 178 aa2.39□□□□□ -2.03
LPP-220ENST00000617246 NBASA2RRP1 2371 aa2.39□□□□□ -2.03
LPP-220ENST00000617246 J3QQQ9 107 aa2.39□□□□□ -2.03
LPP-220ENST00000617246 COX6A2Q02221 97 aa2.39□□□□□ -2.03
LPP-220ENST00000617246 V9GYV3 84 aa2.39□□□□□ -2.03
LPP-220ENST00000617246 FOXI1Q12951 378 aa2.39□□□□□ -2.03
LPP-220ENST00000617246 Q6ZUT4 128 aa2.39□□□□□ -2.03
LPP-220ENST00000617246 HIST2H2BDQ6DRA6 164 aa2.39□□□□□ -2.03
LPP-220ENST00000617246 HIST1H2BLQ99880 126 aa2.39□□□□□ -2.03
LPP-220ENST00000617246 AGPAT4-IT1Q9H0P7 198 aa2.39□□□□□ -2.03
LPP-220ENST00000617246 KRTAP27-1Q3LI81 207 aa2.39□□□□□ -2.03
LPP-220ENST00000617246 C1orf147Q96MC9 270 aaPredicted RBP2.39□□□□□ -2.03
LPP-220ENST00000617246 RTBDNQ9BSG5 229 aaPredicted RBP2.39□□□□□ -2.03
LPP-220ENST00000617246 PYGO1Q9Y3Y4 419 aa2.39□□□□□ -2.03
LPP-220ENST00000617246 SRSF3P84103 164 aaKnown RBP2.39□□□□□ -2.03
LPP-220ENST00000617246 SNAI2O43623 268 aa2.38□□□□□ -2.03
LPP-220ENST00000617246 BPY2O14599 106 aa2.38□□□□□ -2.03
LPP-220ENST00000617246 HIST3H2BBQ8N257 126 aa2.38□□□□□ -2.03
LPP-220ENST00000617246 COA6Q5JTJ3 125 aaKnown RBP2.38□□□□□ -2.03
LPP-220ENST00000617246 C8orf87E5RJ46 101 aa2.38□□□□□ -2.03
LPP-220ENST00000617246 ZFAND3Q9H8U3 227 aa2.38□□□□□ -2.03
LPP-220ENST00000617246 SLPIP03973 132 aa2.38□□□□□ -2.03
LPP-220ENST00000617246 C10orf99Q6UWK7 81 aa2.38□□□□□ -2.03
LPP-220ENST00000617246 LINC00575Q6W349 94 aa2.38□□□□□ -2.03
LPP-220ENST00000617246 Q8N6K4 173 aa2.38□□□□□ -2.03
LPP-220ENST00000617246 IGHV3OR16-9A0A0B4J2B5 98 aa2.38□□□□□ -2.03
LPP-220ENST00000617246 HRES1P13985 223 aa2.38□□□□□ -2.03
LPP-220ENST00000617246 MRPL51Q4U2R6 128 aaKnown RBP2.38□□□□□ -2.03
LPP-220ENST00000617246 ESRGQ1W209 222 aa2.38□□□□□ -2.03
LPP-220ENST00000617246 USF3Q68DE3 2245 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 IGLV5-37A0A075B6J1 123 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 TEX49A0A1B0GTD5 131 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 CHTF8P0CG12 524 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 C18orf65Q6ZTR6 163 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.37□□□□□ -2.03
LPP-220ENST00000617246 OCC1Q8TAD7 63 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 SMKR1H3BMG3 65 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 CLEC2BQ92478 149 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 H3BMG7 143 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 MOBPQ13875 183 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 C7orf65Q6ZTY9 151 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 Q9BRP9 147 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 A0A1B0GUV1 79 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 CYSRT1A8MQ03 144 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 SERP2Q8N6R1 65 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 TRAV12-1A0A0B4J245 112 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 HIST1H2BKO60814 126 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 HIST1H2BJP06899 126 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 HIST1H2BOP23527 126 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 HIST1H2BBP33778 126 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 HIST1H2BDP58876 126 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 HIST1H2BCP62807 126 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 MRPS36P82909 103 aaKnown RBP2.37□□□□□ -2.03
LPP-220ENST00000617246 HIST2H2BEQ16778 126 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.37□□□□□ -2.03
LPP-220ENST00000617246 HIST1H2BHQ93079 126 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 HIST1H2BNQ99877 126 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 HIST1H2BMQ99879 126 aa2.37□□□□□ -2.03
LPP-220ENST00000617246 K7EN84 100 aa2.36□□□□□ -2.03
LPP-220ENST00000617246 LINC00959A0A1B0GUT2 108 aa2.36□□□□□ -2.03
LPP-220ENST00000617246 ADCYAP1P18509 176 aa2.36□□□□□ -2.03
LPP-220ENST00000617246 TMEM254Q8TBM7 123 aa2.36□□□□□ -2.03
LPP-220ENST00000617246 LOC100131303A0A0U1RQF7 123 aa2.36□□□□□ -2.03
LPP-220ENST00000617246 TTC28Q96AY4 2481 aa2.36□□□□□ -2.03
LPP-220ENST00000617246 IGHV6-1A0A0B4J1U7 121 aa2.36□□□□□ -2.03
LPP-220ENST00000617246 C20orf203Q8NBC4 194 aa2.36□□□□□ -2.03
LPP-220ENST00000617246 PTH2Q96A98 100 aa2.36□□□□□ -2.03
LPP-220ENST00000617246 SPINK1P00995 79 aa2.36□□□□□ -2.03
LPP-220ENST00000617246 CSNK1G2-AS1Q8NCQ2 148 aa2.36□□□□□ -2.03
LPP-220ENST00000617246 WIPF1O43516 503 aa2.35□□□□□ -2.03
LPP-220ENST00000617246 CCKP06307 115 aa2.35□□□□□ -2.03
LPP-220ENST00000617246 TOMM6Q96B49 74 aa2.35□□□□□ -2.03
LPP-220ENST00000617246 PRO1854Q9UHT4 67 aa2.35□□□□□ -2.03
LPP-220ENST00000617246 IGLV4-60A0A075B6I1 120 aa2.35□□□□□ -2.03
LPP-220ENST00000617246 LINC00313P59037 77 aa2.35□□□□□ -2.03
LPP-220ENST00000617246 Q6ZRU5 148 aa2.35□□□□□ -2.03
LPP-220ENST00000617246 LINC00588Q9Y4M8 146 aa2.35□□□□□ -2.03
LPP-220ENST00000617246 NAV2Q8IVL1 2488 aa2.35□□□□□ -2.03
LPP-220ENST00000617246 YPEL4Q96NS1 127 aa2.35□□□□□ -2.03
LPP-220ENST00000617246 A0A087WTM6 91 aa2.35□□□□□ -2.03
LPP-220ENST00000617246 TRIAP1O43715 76 aa2.35□□□□□ -2.03
LPP-220ENST00000617246 H2BFSP57053 126 aa2.35□□□□□ -2.03
LPP-220ENST00000617246 RPL39LQ96EH5 51 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms