RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 FAM19A4Q96LR4 140 aa6.88□□□□□ -1.31
TNFRSF9-204ENST00000615230 LINC00242Q5T6M2 205 aa6.88□□□□□ -1.31
TNFRSF9-204ENST00000615230 SPTBN2O15020 2390 aa6.88□□□□□ -1.31
TNFRSF9-204ENST00000615230 IGLV9-49A0A0B4J1Y8 123 aa6.88□□□□□ -1.31
TNFRSF9-204ENST00000615230 LINC00336Q6ZUF6 198 aa6.88□□□□□ -1.31
TNFRSF9-204ENST00000615230 PTPRQQ9UMZ3 2332 aa6.87□□□□□ -1.31
TNFRSF9-204ENST00000615230 C11orf72Q8NBR9 251 aa6.87□□□□□ -1.31
TNFRSF9-204ENST00000615230 RPL37AP8A6NKH3 93 aa6.87□□□□□ -1.31
TNFRSF9-204ENST00000615230 AMELXQ99217 191 aa6.87□□□□□ -1.31
TNFRSF9-204ENST00000615230 CELA1Q9UNI1 258 aa6.87□□□□□ -1.31
TNFRSF9-204ENST00000615230 J3KT08 172 aa6.87□□□□□ -1.31
TNFRSF9-204ENST00000615230 FREM1Q5H8C1 2179 aa6.87□□□□□ -1.31
TNFRSF9-204ENST00000615230 TEX49A0A1B0GTD5 131 aa6.86□□□□□ -1.31
TNFRSF9-204ENST00000615230 NCOA6Q14686 2063 aaPredicted RBP6.86□□□□□ -1.31
TNFRSF9-204ENST00000615230 PCSK5Q92824 1860 aa6.86□□□□□ -1.31
TNFRSF9-204ENST00000615230 CADP27708 2225 aa6.86□□□□□ -1.31
TNFRSF9-204ENST00000615230 WNK2Q9Y3S1 2297 aa6.86□□□□□ -1.31
TNFRSF9-204ENST00000615230 A0A096LNT2 108 aa6.85□□□□□ -1.31
TNFRSF9-204ENST00000615230 LINC00643Q86TS7 51 aa6.85□□□□□ -1.31
TNFRSF9-204ENST00000615230 C14orf132Q9NPU4 83 aa6.85□□□□□ -1.31
TNFRSF9-204ENST00000615230 X6R8D5 127 aa6.85□□□□□ -1.31
TNFRSF9-204ENST00000615230 LST1O00453 97 aa6.85□□□□□ -1.31
TNFRSF9-204ENST00000615230 SMIM1B2RUZ4 78 aa6.85□□□□□ -1.31
TNFRSF9-204ENST00000615230 PPDPFQ9H3Y8 114 aa6.85□□□□□ -1.31
TNFRSF9-204ENST00000615230 ARFGEF3Q5TH69 2177 aa6.84□□□□□ -1.31
TNFRSF9-204ENST00000615230 UNQ6190/PRO20217Q6UXQ8 127 aa6.84□□□□□ -1.31
TNFRSF9-204ENST00000615230 GVINP1Q7Z2Y8 2422 aa6.84□□□□□ -1.31
TNFRSF9-204ENST00000615230 A0A096LNI7 61 aa6.84□□□□□ -1.31
TNFRSF9-204ENST00000615230 PCP4P48539 62 aa6.84□□□□□ -1.31
TNFRSF9-204ENST00000615230 CCKP06307 115 aa6.84□□□□□ -1.31
TNFRSF9-204ENST00000615230 C16orf90A8MZG2 172 aa6.84□□□□□ -1.31
TNFRSF9-204ENST00000615230 IGLV4-60A0A075B6I1 120 aa6.83□□□□□ -1.32
TNFRSF9-204ENST00000615230 LINC00337Q8N6G1 96 aa6.83□□□□□ -1.32
TNFRSF9-204ENST00000615230 PRM2P04554 102 aa6.83□□□□□ -1.32
TNFRSF9-204ENST00000615230 C19orf73Q9NVV2 129 aa6.83□□□□□ -1.32
TNFRSF9-204ENST00000615230 ESRGQ1W209 222 aa6.83□□□□□ -1.32
TNFRSF9-204ENST00000615230 Q8NAQ8 132 aa6.83□□□□□ -1.32
TNFRSF9-204ENST00000615230 SPTBN1Q01082 2364 aaKnown RBP6.83□□□□□ -1.32
TNFRSF9-204ENST00000615230 ANKHD1Q8IWZ3 2542 aaKnown RBP6.82□□□□□ -1.32
TNFRSF9-204ENST00000615230 RTL8CO15255 209 aa6.82□□□□□ -1.32
TNFRSF9-204ENST00000615230 KIF25-AS1Q9Y6Z4 181 aa6.82□□□□□ -1.32
TNFRSF9-204ENST00000615230 NDUFV3P56181 108 aaKnown RBP6.82□□□□□ -1.32
TNFRSF9-204ENST00000615230 COL27A1Q8IZC6 1860 aaPredicted RBP6.82□□□□□ -1.32
TNFRSF9-204ENST00000615230 CIRBP-AS1Q8TBR5 109 aa6.82□□□□□ -1.32
TNFRSF9-204ENST00000615230 Q6ZQY7 126 aa6.81□□□□□ -1.32
TNFRSF9-204ENST00000615230 SMIM11BQ8TCY0 68 aa6.81□□□□□ -1.32
TNFRSF9-204ENST00000615230 AKAP6Q13023 2319 aa6.81□□□□□ -1.32
TNFRSF9-204ENST00000615230 Q6ZRP5 223 aa6.81□□□□□ -1.32
TNFRSF9-204ENST00000615230 LINC00526Q96FQ7 95 aa6.81□□□□□ -1.32
TNFRSF9-204ENST00000615230 COX6A2Q02221 97 aa6.81□□□□□ -1.32
TNFRSF9-204ENST00000615230 IGKV3D-7A0A0C4DH55 119 aa6.8□□□□□ -1.32
TNFRSF9-204ENST00000615230 FOXI1Q12951 378 aa6.8□□□□□ -1.32
TNFRSF9-204ENST00000615230 PRR15LQ9BU68 103 aa6.8□□□□□ -1.32
TNFRSF9-204ENST00000615230 TTTY13Q9BZ97 58 aa6.8□□□□□ -1.32
TNFRSF9-204ENST00000615230 SPINK6Q6UWN8 80 aa6.8□□□□□ -1.32
TNFRSF9-204ENST00000615230 Q9BRP9 147 aa6.8□□□□□ -1.32
TNFRSF9-204ENST00000615230 HRCT1Q6UXD1 115 aa6.79□□□□□ -1.32
TNFRSF9-204ENST00000615230 POLEQ07864 2286 aa6.79□□□□□ -1.32
TNFRSF9-204ENST00000615230 TRIAP1O43715 76 aa6.79□□□□□ -1.32
TNFRSF9-204ENST00000615230 TRBV10-3A0A0K0K1G6 114 aa6.79□□□□□ -1.32
TNFRSF9-204ENST00000615230 LINC00694P0DN24 101 aa6.79□□□□□ -1.32
TNFRSF9-204ENST00000615230 LINC00315P59091 139 aa6.79□□□□□ -1.32
TNFRSF9-204ENST00000615230 PCNX1Q96RV3 2341 aa6.78□□□□□ -1.32
TNFRSF9-204ENST00000615230 TANC2Q9HCD6 1990 aa6.78□□□□□ -1.32
TNFRSF9-204ENST00000615230 FAM208BQ5VWN6 2430 aa6.78□□□□□ -1.32
TNFRSF9-204ENST00000615230 K7EIL1 84 aa6.78□□□□□ -1.32
TNFRSF9-204ENST00000615230 DNAH10OSP0CZ25 163 aa6.78□□□□□ -1.32
TNFRSF9-204ENST00000615230 TRBV7-6A0A0J9YX20 115 aa6.78□□□□□ -1.32
TNFRSF9-204ENST00000615230 ROS1P08922 2347 aa6.78□□□□□ -1.32
TNFRSF9-204ENST00000615230 Q6ZRU5 148 aa6.78□□□□□ -1.32
TNFRSF9-204ENST00000615230 LINC01546A6NGU7 62 aa6.78□□□□□ -1.32
TNFRSF9-204ENST00000615230 K7ERS5 55 aa6.78□□□□□ -1.32
TNFRSF9-204ENST00000615230 TAX1BP3O14907 124 aa6.78□□□□□ -1.32
TNFRSF9-204ENST00000615230 Q6ZSN1 163 aa6.78□□□□□ -1.32
TNFRSF9-204ENST00000615230 C9orf116Q5BN46 136 aaPredicted RBP6.77□□□□□ -1.33
TNFRSF9-204ENST00000615230 J3QL48 77 aa6.76□□□□□ -1.33
TNFRSF9-204ENST00000615230 YPEL4Q96NS1 127 aa6.76□□□□□ -1.33
TNFRSF9-204ENST00000615230 C22orf24Q9Y442 160 aa6.76□□□□□ -1.33
TNFRSF9-204ENST00000615230 Q8N814 137 aa6.76□□□□□ -1.33
TNFRSF9-204ENST00000615230 LINC00588Q9Y4M8 146 aa6.76□□□□□ -1.33
TNFRSF9-204ENST00000615230 TM2D3Q9BRN9 247 aa6.76□□□□□ -1.33
TNFRSF9-204ENST00000615230 MAPKAPK5-AS1Q8N8E1 139 aa6.75□□□□□ -1.33
TNFRSF9-204ENST00000615230 PRRC2AP48634 2157 aaKnown RBP6.75□□□□□ -1.33
TNFRSF9-204ENST00000615230 ATP5EP56381 51 aaPredicted RBP6.75□□□□□ -1.33
TNFRSF9-204ENST00000615230 GVQW2A0A096LPI5 108 aaPredicted RBP6.75□□□□□ -1.33
TNFRSF9-204ENST00000615230 SLPIP03973 132 aa6.75□□□□□ -1.33
TNFRSF9-204ENST00000615230 RPL37AP61513 92 aaKnown RBP6.75□□□□□ -1.33
TNFRSF9-204ENST00000615230 NACAE9PAV3 2078 aa6.75□□□□□ -1.33
TNFRSF9-204ENST00000615230 KRTAP1-3Q8IUG1 177 aa6.75□□□□□ -1.33
TNFRSF9-204ENST00000615230 KRTAP10-11P60412 298 aa6.74□□□□□ -1.33
TNFRSF9-204ENST00000615230 FAM236DA0A1B0GTK5 79 aa6.74□□□□□ -1.33
TNFRSF9-204ENST00000615230 A0A1B0GW54 56 aa6.74□□□□□ -1.33
TNFRSF9-204ENST00000615230 FAM236CP0DP71 79 aa6.74□□□□□ -1.33
TNFRSF9-204ENST00000615230 A8MTW9 85 aa6.73□□□□□ -1.33
TNFRSF9-204ENST00000615230 CREBBPQ92793 2442 aa6.73□□□□□ -1.33
TNFRSF9-204ENST00000615230 NDUFC1O43677 76 aa6.73□□□□□ -1.33
TNFRSF9-204ENST00000615230 CRYGAP11844 174 aa6.73□□□□□ -1.33
TNFRSF9-204ENST00000615230 TTC28Q96AY4 2481 aa6.72□□□□□ -1.33
TNFRSF9-204ENST00000615230 FAM236AA0A1B0GUQ0 79 aa6.72□□□□□ -1.33
TNFRSF9-204ENST00000615230 FAM236BA0A1B0GV22 79 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms