RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 A0A087WYN8 130 aa8.04□□□□□ -1.12
CSTF1-208ENST00000613138 A0A096LNI7 61 aa8.04□□□□□ -1.12
CSTF1-208ENST00000613138 MALP21145 153 aa8.04□□□□□ -1.12
CSTF1-208ENST00000613138 CIRBPQ14011 172 aaKnown RBP8.04□□□□□ -1.12
CSTF1-208ENST00000613138 SPACA4Q8TDM5 124 aa8.04□□□□□ -1.12
CSTF1-208ENST00000613138 LRP1Q07954 4544 aaKnown RBP8.03□□□□□ -1.12
CSTF1-208ENST00000613138 TRAV9-1A0A075B6T8 112 aa8.03□□□□□ -1.12
CSTF1-208ENST00000613138 S100PP25815 95 aa8.03□□□□□ -1.12
CSTF1-208ENST00000613138 HNRNPA3P51991 378 aaKnown RBP8.03□□□□□ -1.12
CSTF1-208ENST00000613138 RHEBQ15382 184 aa8.03□□□□□ -1.12
CSTF1-208ENST00000613138 Q6ZRU5 148 aa8.03□□□□□ -1.12
CSTF1-208ENST00000613138 DPH3Q96FX2 82 aa8.03□□□□□ -1.12
CSTF1-208ENST00000613138 CARD19Q96LW7 228 aa8.03□□□□□ -1.12
CSTF1-208ENST00000613138 ALKBH7Q9BT30 221 aaPredicted RBP8.03□□□□□ -1.12
CSTF1-208ENST00000613138 MRPL18Q9H0U6 180 aaKnown RBP8.03□□□□□ -1.12
CSTF1-208ENST00000613138 IGHV3OR16-9A0A0B4J2B5 98 aa8.02□□□□□ -1.13
CSTF1-208ENST00000613138 A0A0J9YXV3 536 aa8.02□□□□□ -1.13
CSTF1-208ENST00000613138 ZNF561-AS1K7EIQ3 104 aa8.02□□□□□ -1.13
CSTF1-208ENST00000613138 MAJINQ3KP22 176 aa8.02□□□□□ -1.13
CSTF1-208ENST00000613138 GNB1LQ9BYB4 327 aa8.02□□□□□ -1.13
CSTF1-208ENST00000613138 CYSLTR1Q9Y271 337 aa8.02□□□□□ -1.13
CSTF1-208ENST00000613138 IGIPA6NJ69 53 aa8.01□□□□□ -1.13
CSTF1-208ENST00000613138 SPAG11BQ08648 103 aa8.01□□□□□ -1.13
CSTF1-208ENST00000613138 SYCNQ0VAF6 134 aa8.01□□□□□ -1.13
CSTF1-208ENST00000613138 FABP9Q0Z7S8 132 aa8.01□□□□□ -1.13
CSTF1-208ENST00000613138 LINC00242Q5T6M2 205 aa8.01□□□□□ -1.13
CSTF1-208ENST00000613138 TMEM141Q96I45 108 aa8.01□□□□□ -1.13
CSTF1-208ENST00000613138 LINC00474Q9P2X8 69 aa8.01□□□□□ -1.13
CSTF1-208ENST00000613138 PYGO1Q9Y3Y4 419 aa8.01□□□□□ -1.13
CSTF1-208ENST00000613138 FAT3Q8TDW7 4589 aa8□□□□□ -1.13
CSTF1-208ENST00000613138 G0S2P27469 103 aa8□□□□□ -1.13
CSTF1-208ENST00000613138 UBE2D1P51668 147 aa8□□□□□ -1.13
CSTF1-208ENST00000613138 ORMDL2Q53FV1 153 aa8□□□□□ -1.13
CSTF1-208ENST00000613138 C10orf25Q5T742 122 aa8□□□□□ -1.13
CSTF1-208ENST00000613138 ORAOV1Q8WV07 137 aa8□□□□□ -1.13
CSTF1-208ENST00000613138 NXT2Q9NPJ8 142 aaKnown RBP8□□□□□ -1.13
CSTF1-208ENST00000613138 DMBT1Q9UGM3 2413 aaPredicted RBP8□□□□□ -1.13
CSTF1-208ENST00000613138 K7EMI3 77 aa7.99□□□□□ -1.13
CSTF1-208ENST00000613138 APOMO95445 188 aa7.99□□□□□ -1.13
CSTF1-208ENST00000613138 RPL37AP61513 92 aaKnown RBP7.99□□□□□ -1.13
CSTF1-208ENST00000613138 HERC1Q15751 4861 aa7.99□□□□□ -1.13
CSTF1-208ENST00000613138 CAMK2N2Q96S95 79 aa7.99□□□□□ -1.13
CSTF1-208ENST00000613138 AMELXQ99217 191 aa7.99□□□□□ -1.13
CSTF1-208ENST00000613138 TEX43Q6ZNM6 134 aa7.98□□□□□ -1.13
CSTF1-208ENST00000613138 STPG4Q8N801 248 aa7.98□□□□□ -1.13
CSTF1-208ENST00000613138 TOMM6Q96B49 74 aa7.98□□□□□ -1.13
CSTF1-208ENST00000613138 URB1-AS1Q96HZ7 61 aa7.98□□□□□ -1.13
CSTF1-208ENST00000613138 PLAC8Q9NZF1 115 aa7.98□□□□□ -1.13
CSTF1-208ENST00000613138 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.97□□□□□ -1.13
CSTF1-208ENST00000613138 GAGE2BQ13066 116 aa7.97□□□□□ -1.13
CSTF1-208ENST00000613138 UNQ6190/PRO20217Q6UXQ8 127 aa7.97□□□□□ -1.13
CSTF1-208ENST00000613138 YPEL4Q96NS1 127 aa7.97□□□□□ -1.13
CSTF1-208ENST00000613138 A0A087WZ39 114 aa7.96□□□□□ -1.14
CSTF1-208ENST00000613138 LINC01546A6NGU7 62 aa7.96□□□□□ -1.14
CSTF1-208ENST00000613138 F8WDY8 70 aa7.96□□□□□ -1.14
CSTF1-208ENST00000613138 SNAPINO95295 136 aa7.96□□□□□ -1.14
CSTF1-208ENST00000613138 KIAA0087Q14695 138 aa7.96□□□□□ -1.14
CSTF1-208ENST00000613138 C2orf82Q6UX34 121 aa7.96□□□□□ -1.14
CSTF1-208ENST00000613138 SVBPQ8N300 66 aa7.96□□□□□ -1.14
CSTF1-208ENST00000613138 VCX2Q9H322 139 aa7.96□□□□□ -1.14
CSTF1-208ENST00000613138 TRAPPC1Q9Y5R8 145 aa7.96□□□□□ -1.14
CSTF1-208ENST00000613138 A0A096LNJ9 63 aa7.95□□□□□ -1.14
CSTF1-208ENST00000613138 MT-ND6P03923 174 aa7.95□□□□□ -1.14
CSTF1-208ENST00000613138 NPSP0C0P6 89 aa7.95□□□□□ -1.14
CSTF1-208ENST00000613138 PTTG1IPP53801 180 aa7.95□□□□□ -1.14
CSTF1-208ENST00000613138 PMCHL1Q16048 86 aa7.95□□□□□ -1.14
CSTF1-208ENST00000613138 COX19Q49B96 90 aa7.95□□□□□ -1.14
CSTF1-208ENST00000613138 CBLN2Q8IUK8 224 aa7.95□□□□□ -1.14
CSTF1-208ENST00000613138 C2orf48Q96LS8 159 aa7.95□□□□□ -1.14
CSTF1-208ENST00000613138 SCGB3A1Q96QR1 104 aa7.95□□□□□ -1.14
CSTF1-208ENST00000613138 A0A1W2PNN7 141 aa7.94□□□□□ -1.14
CSTF1-208ENST00000613138 RPL18AQ02543 176 aaKnown RBP7.94□□□□□ -1.14
CSTF1-208ENST00000613138 PAPPA-AS1Q5QFB9 102 aa7.94□□□□□ -1.14
CSTF1-208ENST00000613138 Q6ZN92 141 aa7.94□□□□□ -1.14
CSTF1-208ENST00000613138 FA2HQ7L5A8 372 aa7.94□□□□□ -1.14
CSTF1-208ENST00000613138 OR10D4PQ8NGN7 298 aa7.94□□□□□ -1.14
CSTF1-208ENST00000613138 C18orf32Q8TCD1 76 aa7.94□□□□□ -1.14
CSTF1-208ENST00000613138 C7orf33Q8WU49 177 aa7.94□□□□□ -1.14
CSTF1-208ENST00000613138 C2orf88Q9BSF0 95 aa7.94□□□□□ -1.14
CSTF1-208ENST00000613138 C6orf48Q9UBA6 75 aa7.94□□□□□ -1.14
CSTF1-208ENST00000613138 LOC107984640A0A0U1RRK4 108 aa7.93□□□□□ -1.14
CSTF1-208ENST00000613138 LINC01549A6NIU2 74 aa7.93□□□□□ -1.14
CSTF1-208ENST00000613138 C9orf116Q5BN46 136 aaPredicted RBP7.93□□□□□ -1.14
CSTF1-208ENST00000613138 TIMM17AQ99595 171 aa7.93□□□□□ -1.14
CSTF1-208ENST00000613138 CDKN2A-AS1Q9UH64 79 aa7.93□□□□□ -1.14
CSTF1-208ENST00000613138 J3QL48 77 aa7.92□□□□□ -1.14
CSTF1-208ENST00000613138 ERASQ7Z444 233 aa7.92□□□□□ -1.14
CSTF1-208ENST00000613138 FAM168BA1KXE4 195 aa7.91□□□□□ -1.14
CSTF1-208ENST00000613138 NDUFA1O15239 70 aa7.91□□□□□ -1.14
CSTF1-208ENST00000613138 FAM19A3Q7Z5A8 133 aa7.91□□□□□ -1.14
CSTF1-208ENST00000613138 SMCO4Q9NRQ5 59 aa7.91□□□□□ -1.14
CSTF1-208ENST00000613138 TOMM7Q9P0U1 55 aa7.91□□□□□ -1.14
CSTF1-208ENST00000613138 OXTP01178 125 aa7.9□□□□□ -1.14
CSTF1-208ENST00000613138 SEC11AP67812 179 aa7.9□□□□□ -1.14
CSTF1-208ENST00000613138 RNF151Q2KHN1 245 aa7.9□□□□□ -1.14
CSTF1-208ENST00000613138 Q6ZRP5 223 aa7.9□□□□□ -1.14
CSTF1-208ENST00000613138 MRPL35Q9NZE8 188 aaKnown RBP7.9□□□□□ -1.14
CSTF1-208ENST00000613138 KRTAP29-1A8MX34 341 aaPredicted RBP7.89□□□□□ -1.15
CSTF1-208ENST00000613138 GAGE2EQ4V326 116 aa7.89□□□□□ -1.15
CSTF1-208ENST00000613138 CST9LQ9H4G1 147 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms