RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 TOMM7Q9P0U1 55 aa11.71□□□□□ -0.53
TSKU-205ENST00000612930 CSPG4Q6UVK1 2322 aa11.71□□□□□ -0.53
TSKU-205ENST00000612930 MSMBP08118 114 aa11.71□□□□□ -0.54
TSKU-205ENST00000612930 HILS1P60008 231 aa11.71□□□□□ -0.54
TSKU-205ENST00000612930 FHL2Q14192 279 aa11.71□□□□□ -0.54
TSKU-205ENST00000612930 K7EQD1 137 aa11.7□□□□□ -0.54
TSKU-205ENST00000612930 INSP01308 110 aa11.7□□□□□ -0.54
TSKU-205ENST00000612930 DEFB112Q30KQ8 113 aa11.7□□□□□ -0.54
TSKU-205ENST00000612930 MAP6D1Q9H9H5 199 aa11.7□□□□□ -0.54
TSKU-205ENST00000612930 IGHV4-30-2A0A087WSY4 118 aa11.69□□□□□ -0.54
TSKU-205ENST00000612930 TRGV1A0A0A0MS02 117 aa11.69□□□□□ -0.54
TSKU-205ENST00000612930 DEFB136Q30KP8 78 aa11.69□□□□□ -0.54
TSKU-205ENST00000612930 C18orf65Q6ZTR6 163 aa11.69□□□□□ -0.54
TSKU-205ENST00000612930 TRAV25A0A0B4J276 109 aa11.68□□□□□ -0.54
TSKU-205ENST00000612930 CCKP06307 115 aa11.68□□□□□ -0.54
TSKU-205ENST00000612930 TRBV10-1A0A0K0K1A3 114 aa11.68□□□□□ -0.54
TSKU-205ENST00000612930 UBE2E2Q96LR5 201 aa11.68□□□□□ -0.54
TSKU-205ENST00000612930 WFDC9Q8NEX5 89 aa11.67□□□□□ -0.54
TSKU-205ENST00000612930 IL17DQ8TAD2 202 aa11.67□□□□□ -0.54
TSKU-205ENST00000612930 XCL2Q9UBD3 114 aa11.67□□□□□ -0.54
TSKU-205ENST00000612930 HRCT1Q6UXD1 115 aa11.66□□□□□ -0.54
TSKU-205ENST00000612930 ORMDL1Q9P0S3 153 aa11.66□□□□□ -0.54
TSKU-205ENST00000612930 TMEM243Q9BU79 118 aa11.65□□□□□ -0.54
TSKU-205ENST00000612930 MAP1AP78559 2803 aaPredicted RBP11.65□□□□□ -0.54
TSKU-205ENST00000612930 UBE2L6O14933 153 aa11.65□□□□□ -0.54
TSKU-205ENST00000612930 GHRHP01286 108 aa11.65□□□□□ -0.54
TSKU-205ENST00000612930 PFN2P35080 140 aa11.65□□□□□ -0.54
TSKU-205ENST00000612930 Q6ZTI0 123 aa11.65□□□□□ -0.54
TSKU-205ENST00000612930 IGKV3OR2-268A0A0C4DH90 116 aa11.64□□□□□ -0.55
TSKU-205ENST00000612930 PAX4O43316 350 aa11.64□□□□□ -0.55
TSKU-205ENST00000612930 C1orf158Q8N1D5 194 aa11.64□□□□□ -0.55
TSKU-205ENST00000612930 IBA57-AS1B1ANH7 110 aa11.64□□□□□ -0.55
TSKU-205ENST00000612930 UCNP55089 124 aa11.64□□□□□ -0.55
TSKU-205ENST00000612930 TRAV23DV6A0A075B6W5 121 aa11.63□□□□□ -0.55
TSKU-205ENST00000612930 FAM19A1Q7Z5A9 133 aa11.63□□□□□ -0.55
TSKU-205ENST00000612930 LY6G6DO95868 133 aa11.63□□□□□ -0.55
TSKU-205ENST00000612930 TRBV6-4A0A1B0GX49 114 aa11.62□□□□□ -0.55
TSKU-205ENST00000612930 IGHV3OR16-9A0A0B4J2B5 98 aa11.62□□□□□ -0.55
TSKU-205ENST00000612930 LINC00167Q96N53 147 aa11.61□□□□□ -0.55
TSKU-205ENST00000612930 CCL19Q99731 98 aa11.61□□□□□ -0.55
TSKU-205ENST00000612930 ZNF702PQ9H963 129 aa11.61□□□□□ -0.55
TSKU-205ENST00000612930 IGF2RP11717 2491 aa11.6□□□□□ -0.55
TSKU-205ENST00000612930 C2CD3Q4AC94 2353 aa11.6□□□□□ -0.55
TSKU-205ENST00000612930 LOC100131303A0A0U1RQF7 123 aa11.6□□□□□ -0.55
TSKU-205ENST00000612930 NDUFC2O95298 119 aa11.6□□□□□ -0.55
TSKU-205ENST00000612930 LYPD5Q6UWN5 251 aa11.6□□□□□ -0.55
TSKU-205ENST00000612930 ENHOQ6UWT2 76 aa11.6□□□□□ -0.55
TSKU-205ENST00000612930 IGLV4-60A0A075B6I1 120 aa11.6□□□□□ -0.55
TSKU-205ENST00000612930 NDUFC2-KCTD14E9PQ53 114 aa11.6□□□□□ -0.55
TSKU-205ENST00000612930 S100A7L2Q5SY68 101 aa11.6□□□□□ -0.55
TSKU-205ENST00000612930 B4DSR2 109 aa11.59□□□□□ -0.55
TSKU-205ENST00000612930 ATP5EP2Q5VTU8 51 aa11.59□□□□□ -0.55
TSKU-205ENST00000612930 CSMD2Q7Z408 3487 aa11.58□□□□□ -0.56
TSKU-205ENST00000612930 MUC6Q6W4X9 2439 aa11.58□□□□□ -0.56
TSKU-205ENST00000612930 CELSR2Q9HCU4 2923 aa11.58□□□□□ -0.56
TSKU-205ENST00000612930 NBL1P41271 181 aa11.58□□□□□ -0.56
TSKU-205ENST00000612930 C20orf197Q8N268 126 aa11.58□□□□□ -0.56
TSKU-205ENST00000612930 JMJD7-PLA2G4BH0Y9G9 81 aa11.57□□□□□ -0.56
TSKU-205ENST00000612930 DEFB114Q30KQ6 69 aa11.57□□□□□ -0.56
TSKU-205ENST00000612930 A0A087WZ39 114 aa11.57□□□□□ -0.56
TSKU-205ENST00000612930 DYNLRB2Q8TF09 96 aa11.57□□□□□ -0.56
TSKU-205ENST00000612930 A0A096LNT2 108 aa11.56□□□□□ -0.56
TSKU-205ENST00000612930 NANOS2P60321 138 aaKnown RBP11.56□□□□□ -0.56
TSKU-205ENST00000612930 ODF3L2Q3SX64 289 aa11.56□□□□□ -0.56
TSKU-205ENST00000612930 Q8N814 137 aa11.56□□□□□ -0.56
TSKU-205ENST00000612930 C11orf68Q9H3H3 251 aaKnown RBP11.55□□□□□ -0.56
TSKU-205ENST00000612930 SPG11Q96JI7 2443 aa11.55□□□□□ -0.56
TSKU-205ENST00000612930 XCL1P47992 114 aa11.55□□□□□ -0.56
TSKU-205ENST00000612930 NOP10Q9NPE3 64 aaKnown RBP11.55□□□□□ -0.56
TSKU-205ENST00000612930 PRR3P79522 188 aaKnown RBP11.54□□□□□ -0.56
TSKU-205ENST00000612930 STHQ8IWL8 128 aa11.53□□□□□ -0.56
TSKU-205ENST00000612930 TRBV10-3A0A0K0K1G6 114 aa11.53□□□□□ -0.56
TSKU-205ENST00000612930 FAM236DA0A1B0GTK5 79 aa11.53□□□□□ -0.56
TSKU-205ENST00000612930 TMEM256-PLSCR3K7ERE1 68 aa11.53□□□□□ -0.56
TSKU-205ENST00000612930 FAM236CP0DP71 79 aa11.53□□□□□ -0.56
TSKU-205ENST00000612930 EPM2AB3EWF7 344 aa11.52□□□□□ -0.57
TSKU-205ENST00000612930 C6orf226Q5I0X4 101 aa11.52□□□□□ -0.57
TSKU-205ENST00000612930 UBL5Q9BZL1 73 aa11.51□□□□□ -0.57
TSKU-205ENST00000612930 H7BZZ5 65 aa11.51□□□□□ -0.57
TSKU-205ENST00000612930 NOTCH3Q9UM47 2321 aa11.5□□□□□ -0.57
TSKU-205ENST00000612930 TRBV6-8A0A0A6YYG3 113 aa11.49□□□□□ -0.57
TSKU-205ENST00000612930 PLAC8L1A1L4L8 177 aa11.49□□□□□ -0.57
TSKU-205ENST00000612930 KHDC1LQ5JSQ8 128 aa11.49□□□□□ -0.57
TSKU-205ENST00000612930 LINC00959A0A1B0GUT2 108 aa11.49□□□□□ -0.57
TSKU-205ENST00000612930 Q6YL49 198 aa11.48□□□□□ -0.57
TSKU-205ENST00000612930 TMEM86BQ8N661 226 aa11.48□□□□□ -0.57
TSKU-205ENST00000612930 TRGV2A0A075B6R0 118 aa11.48□□□□□ -0.57
TSKU-205ENST00000612930 RNASE1P07998 156 aaKnown RBP11.48□□□□□ -0.57
TSKU-205ENST00000612930 C4orf3Q8WVX3 66 aa11.48□□□□□ -0.57
TSKU-205ENST00000612930 GNLYP22749 145 aa11.47□□□□□ -0.57
TSKU-205ENST00000612930 SERP1Q9Y6X1 66 aa11.47□□□□□ -0.57
TSKU-205ENST00000612930 TRAV7A0A075B6U4 112 aa11.46□□□□□ -0.58
TSKU-205ENST00000612930 LINC01356Q8N9X3 169 aa11.46□□□□□ -0.58
TSKU-205ENST00000612930 MAPK1IP1LQ8NDC0 245 aa11.46□□□□□ -0.58
TSKU-205ENST00000612930 M0R2N4 97 aa11.45□□□□□ -0.58
TSKU-205ENST00000612930 PLA2G2AP14555 144 aa11.45□□□□□ -0.58
TSKU-205ENST00000612930 TRGV4A0A0C4DH28 118 aa11.45□□□□□ -0.58
TSKU-205ENST00000612930 Q6ZQT0 140 aa11.45□□□□□ -0.58
TSKU-205ENST00000612930 MRAPQ8TCY5 172 aa11.45□□□□□ -0.58
TSKU-205ENST00000612930 GIG44P09565 113 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms