RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 LAMTOR2Q9Y2Q5 125 aa8.21□□□□□ -1.1
SNX20-205ENST00000610485 UBE2D4Q9Y2X8 147 aa8.21□□□□□ -1.1
SNX20-205ENST00000610485 CSDC2Q9Y534 153 aaKnown RBP8.21□□□□□ -1.1
SNX20-205ENST00000610485 TNFRSF6BO95407 300 aa8.2□□□□□ -1.1
SNX20-205ENST00000610485 NPYP01303 97 aa8.2□□□□□ -1.1
SNX20-205ENST00000610485 CHTF8P0CG12 524 aa8.2□□□□□ -1.1
SNX20-205ENST00000610485 SNRPEP62304 92 aaKnown RBP8.2□□□□□ -1.1
SNX20-205ENST00000610485 SMAGPQ0VAQ4 97 aa8.2□□□□□ -1.1
SNX20-205ENST00000610485 SS18Q15532 418 aa8.2□□□□□ -1.1
SNX20-205ENST00000610485 CD164L2Q6UWJ8 174 aa8.2□□□□□ -1.1
SNX20-205ENST00000610485 IGHV1-58A0A0C4DH39 117 aa8.19□□□□□ -1.1
SNX20-205ENST00000610485 COA6Q5JTJ3 125 aaKnown RBP8.19□□□□□ -1.1
SNX20-205ENST00000610485 PRSS3P2Q8NHM4 247 aa8.19□□□□□ -1.1
SNX20-205ENST00000610485 MAP1LC3AQ9H492 121 aa8.19□□□□□ -1.1
SNX20-205ENST00000610485 A0A087WYN8 130 aa8.18□□□□□ -1.1
SNX20-205ENST00000610485 LOC389332A0A1B0GUA5 103 aa8.18□□□□□ -1.1
SNX20-205ENST00000610485 C5orf52A6NGY3 159 aa8.18□□□□□ -1.1
SNX20-205ENST00000610485 COX6A2Q02221 97 aa8.18□□□□□ -1.1
SNX20-205ENST00000610485 TIMM21Q9BVV7 248 aa8.18□□□□□ -1.1
SNX20-205ENST00000610485 PLAC8Q9NZF1 115 aa8.18□□□□□ -1.1
SNX20-205ENST00000610485 LRP1Q07954 4544 aaKnown RBP8.18□□□□□ -1.1
SNX20-205ENST00000610485 FAT3Q8TDW7 4589 aa8.17□□□□□ -1.1
SNX20-205ENST00000610485 TCAPO15273 167 aa8.17□□□□□ -1.1
SNX20-205ENST00000610485 HNRNPA3P51991 378 aaKnown RBP8.17□□□□□ -1.1
SNX20-205ENST00000610485 FA2HQ7L5A8 372 aa8.17□□□□□ -1.1
SNX20-205ENST00000610485 TMEM18Q96B42 140 aa8.17□□□□□ -1.1
SNX20-205ENST00000610485 SMIM2Q9BVW6 85 aa8.17□□□□□ -1.1
SNX20-205ENST00000610485 PRSS47A8MTI9 375 aa8.16□□□□□ -1.1
SNX20-205ENST00000610485 SERF1AO75920 110 aa8.16□□□□□ -1.1
SNX20-205ENST00000610485 OXTP01178 125 aa8.16□□□□□ -1.1
SNX20-205ENST00000610485 LINC00614P0C842 121 aa8.16□□□□□ -1.1
SNX20-205ENST00000610485 Q6ZUT4 128 aa8.16□□□□□ -1.1
SNX20-205ENST00000610485 DPH3Q96FX2 82 aa8.16□□□□□ -1.1
SNX20-205ENST00000610485 PKHD1L1Q86WI1 4243 aa8.15□□□□□ -1.1
SNX20-205ENST00000610485 HSBP1O75506 76 aa8.15□□□□□ -1.1
SNX20-205ENST00000610485 S100A2P29034 98 aa8.15□□□□□ -1.1
SNX20-205ENST00000610485 IFI27P40305 119 aaPredicted RBP8.15□□□□□ -1.1
SNX20-205ENST00000610485 RNASE13Q5GAN3 156 aaKnown RBP8.15□□□□□ -1.1
SNX20-205ENST00000610485 Q8N8P6 123 aa8.15□□□□□ -1.1
SNX20-205ENST00000610485 CHCHD1Q96BP2 118 aaKnown RBP8.15□□□□□ -1.1
SNX20-205ENST00000610485 LINC00526Q96FQ7 95 aa8.15□□□□□ -1.1
SNX20-205ENST00000610485 NXT2Q9NPJ8 142 aaKnown RBP8.15□□□□□ -1.1
SNX20-205ENST00000610485 TRAV13-1A0A0B4J241 112 aa8.14□□□□□ -1.11
SNX20-205ENST00000610485 IGKV2-24A0A0C4DH68 120 aa8.14□□□□□ -1.11
SNX20-205ENST00000610485 COX7A2LO14548 114 aa8.14□□□□□ -1.11
SNX20-205ENST00000610485 NUPR1O60356 82 aa8.14□□□□□ -1.11
SNX20-205ENST00000610485 RPL39P62891 51 aaKnown RBP8.14□□□□□ -1.11
SNX20-205ENST00000610485 PDZD11Q5EBL8 140 aa8.14□□□□□ -1.11
SNX20-205ENST00000610485 HIST3H2BBQ8N257 126 aa8.14□□□□□ -1.11
SNX20-205ENST00000610485 FAM104AQ969W3 186 aa8.14□□□□□ -1.11
SNX20-205ENST00000610485 URB1-AS1Q96HZ7 61 aa8.14□□□□□ -1.11
SNX20-205ENST00000610485 CARD19Q96LW7 228 aa8.14□□□□□ -1.11
SNX20-205ENST00000610485 PKIGQ9Y2B9 76 aa8.14□□□□□ -1.11
SNX20-205ENST00000610485 A0A096LNI7 61 aa8.13□□□□□ -1.11
SNX20-205ENST00000610485 ZNF561-AS1K7EIQ3 104 aa8.13□□□□□ -1.11
SNX20-205ENST00000610485 LINC00310P59036 64 aa8.13□□□□□ -1.11
SNX20-205ENST00000610485 MAJINQ3KP22 176 aa8.13□□□□□ -1.11
SNX20-205ENST00000610485 SPANXA1Q9NS26 97 aa8.13□□□□□ -1.11
SNX20-205ENST00000610485 MALP21145 153 aa8.12□□□□□ -1.11
SNX20-205ENST00000610485 MRPS36P82909 103 aaKnown RBP8.12□□□□□ -1.11
SNX20-205ENST00000610485 SYCNQ0VAF6 134 aa8.12□□□□□ -1.11
SNX20-205ENST00000610485 LINC00474Q9P2X8 69 aa8.12□□□□□ -1.11
SNX20-205ENST00000610485 IGLV4-69A0A075B6H9 119 aa8.11□□□□□ -1.11
SNX20-205ENST00000610485 FAM19A2Q8N3H0 131 aa8.11□□□□□ -1.11
SNX20-205ENST00000610485 STPG4Q8N801 248 aa8.11□□□□□ -1.11
SNX20-205ENST00000610485 C7orf33Q8WU49 177 aa8.11□□□□□ -1.11
SNX20-205ENST00000610485 LOC105371267A0A1B0GV96 52 aa8.1□□□□□ -1.11
SNX20-205ENST00000610485 FABP4P15090 132 aa8.1□□□□□ -1.11
SNX20-205ENST00000610485 C5orf38Q86SI9 138 aa8.1□□□□□ -1.11
SNX20-205ENST00000610485 LINC01546A6NGU7 62 aa8.09□□□□□ -1.11
SNX20-205ENST00000610485 K7EMI3 77 aa8.09□□□□□ -1.11
SNX20-205ENST00000610485 APOMO95445 188 aa8.09□□□□□ -1.11
SNX20-205ENST00000610485 ORMDL2Q53FV1 153 aa8.09□□□□□ -1.11
SNX20-205ENST00000610485 Q6ZRU5 148 aa8.09□□□□□ -1.11
SNX20-205ENST00000610485 C2orf48Q96LS8 159 aa8.09□□□□□ -1.11
SNX20-205ENST00000610485 HIST1H2BLQ99880 126 aa8.09□□□□□ -1.11
SNX20-205ENST00000610485 OPRPNQ99935 248 aaPredicted RBP8.09□□□□□ -1.11
SNX20-205ENST00000610485 IGHV3OR16-9A0A0B4J2B5 98 aa8.08□□□□□ -1.12
SNX20-205ENST00000610485 IFITM10A6NMD0 228 aa8.08□□□□□ -1.12
SNX20-205ENST00000610485 PMCHL1Q16048 86 aa8.08□□□□□ -1.12
SNX20-205ENST00000610485 OR10D4PQ8NGN7 298 aa8.08□□□□□ -1.12
SNX20-205ENST00000610485 PACRGQ96M98 296 aaPredicted RBP8.08□□□□□ -1.12
SNX20-205ENST00000610485 CAMK2N2Q96S95 79 aa8.08□□□□□ -1.12
SNX20-205ENST00000610485 PYGO1Q9Y3Y4 419 aa8.08□□□□□ -1.12
SNX20-205ENST00000610485 LOC107984640A0A0U1RRK4 108 aa8.07□□□□□ -1.12
SNX20-205ENST00000610485 HBDP02042 147 aa8.07□□□□□ -1.12
SNX20-205ENST00000610485 G0S2P27469 103 aa8.07□□□□□ -1.12
SNX20-205ENST00000610485 AKR1D1P51857 326 aa8.07□□□□□ -1.12
SNX20-205ENST00000610485 PTTG1IPP53801 180 aa8.07□□□□□ -1.12
SNX20-205ENST00000610485 SPAG11BQ08648 103 aa8.07□□□□□ -1.12
SNX20-205ENST00000610485 HMCN2Q8NDA2 5059 aa8.06□□□□□ -1.12
SNX20-205ENST00000610485 IGLV4-3A0A075B6K6 122 aa8.06□□□□□ -1.12
SNX20-205ENST00000610485 LEPROTL1O95214 131 aa8.06□□□□□ -1.12
SNX20-205ENST00000610485 PRR3P79522 188 aaKnown RBP8.06□□□□□ -1.12
SNX20-205ENST00000610485 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.05□□□□□ -1.12
SNX20-205ENST00000610485 RNF151Q2KHN1 245 aa8.05□□□□□ -1.12
SNX20-205ENST00000610485 ORAOV1Q8WV07 137 aa8.05□□□□□ -1.12
SNX20-205ENST00000610485 F8WDY8 70 aa8.04□□□□□ -1.12
SNX20-205ENST00000610485 MT1HL1P0DM35 61 aa8.04□□□□□ -1.12
SNX20-205ENST00000610485 GAGE2BQ13066 116 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms