RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 LINC00158P58513 81 aa8.85□□□□□ -0.99
CDCA3-212ENST00000604599 NTM-AS1Q6ZSK4 140 aa8.85□□□□□ -0.99
CDCA3-212ENST00000604599 IGKV3OR2-268A0A0C4DH90 116 aa8.84□□□□□ -0.99
CDCA3-212ENST00000604599 WIPF1O43516 503 aa8.84□□□□□ -0.99
CDCA3-212ENST00000604599 Q5XG85 94 aa8.84□□□□□ -0.99
CDCA3-212ENST00000604599 C10orf105Q8TEF2 133 aa8.84□□□□□ -0.99
CDCA3-212ENST00000604599 OBSCN-AS1Q96MR7 158 aa8.84□□□□□ -0.99
CDCA3-212ENST00000604599 CDC42SE2Q9NRR3 84 aa8.84□□□□□ -0.99
CDCA3-212ENST00000604599 RPL36AP83881 106 aaKnown RBP8.84□□□□□ -0.99
CDCA3-212ENST00000604599 RPL36ALQ969Q0 106 aaKnown RBP8.84□□□□□ -0.99
CDCA3-212ENST00000604599 FAM19A3Q7Z5A8 133 aa8.83□□□□□ -1
CDCA3-212ENST00000604599 CCL18P55774 89 aa8.83□□□□□ -1
CDCA3-212ENST00000604599 TRAV23DV6A0A075B6W5 121 aa8.82□□□□□ -1
CDCA3-212ENST00000604599 TMEM89A2RUT3 159 aa8.82□□□□□ -1
CDCA3-212ENST00000604599 IGHV4-59P01825 116 aa8.82□□□□□ -1
CDCA3-212ENST00000604599 COX7B2Q8TF08 81 aa8.82□□□□□ -1
CDCA3-212ENST00000604599 H0YGX0 51 aa8.82□□□□□ -1
CDCA3-212ENST00000604599 GHRHP01286 108 aa8.82□□□□□ -1
CDCA3-212ENST00000604599 PFN2P35080 140 aa8.82□□□□□ -1
CDCA3-212ENST00000604599 DEFB136Q30KP8 78 aa8.82□□□□□ -1
CDCA3-212ENST00000604599 TRGV1A0A0A0MS02 117 aa8.81□□□□□ -1
CDCA3-212ENST00000604599 AVPP01185 164 aa8.81□□□□□ -1
CDCA3-212ENST00000604599 PAX4O43316 350 aa8.81□□□□□ -1
CDCA3-212ENST00000604599 SS18Q15532 418 aa8.81□□□□□ -1
CDCA3-212ENST00000604599 SLURP1P55000 103 aa8.8□□□□□ -1
CDCA3-212ENST00000604599 XCL2Q9UBD3 114 aa8.8□□□□□ -1
CDCA3-212ENST00000604599 FAM19A1Q7Z5A9 133 aa8.8□□□□□ -1
CDCA3-212ENST00000604599 UBE2L6O14933 153 aa8.79□□□□□ -1
CDCA3-212ENST00000604599 WNK1Q9H4A3 2382 aa8.79□□□□□ -1
CDCA3-212ENST00000604599 C20orf197Q8N268 126 aa8.79□□□□□ -1
CDCA3-212ENST00000604599 ORMDL1Q9P0S3 153 aa8.79□□□□□ -1
CDCA3-212ENST00000604599 INSP01308 110 aa8.78□□□□□ -1
CDCA3-212ENST00000604599 ENHOQ6UWT2 76 aa8.78□□□□□ -1
CDCA3-212ENST00000604599 C18orf65Q6ZTR6 163 aa8.78□□□□□ -1
CDCA3-212ENST00000604599 C11orf68Q9H3H3 251 aaKnown RBP8.78□□□□□ -1
CDCA3-212ENST00000604599 A8MTW9 85 aa8.78□□□□□ -1
CDCA3-212ENST00000604599 K7EQD1 137 aa8.78□□□□□ -1
CDCA3-212ENST00000604599 CCKP06307 115 aa8.78□□□□□ -1
CDCA3-212ENST00000604599 UBE2E2Q96LR5 201 aa8.78□□□□□ -1
CDCA3-212ENST00000604599 MYO9AB2RTY4 2548 aa8.78□□□□□ -1
CDCA3-212ENST00000604599 ZANQ9Y493 2812 aa8.78□□□□□ -1
CDCA3-212ENST00000604599 TMEM243Q9BU79 118 aa8.77□□□□□ -1.01
CDCA3-212ENST00000604599 MAP6D1Q9H9H5 199 aa8.77□□□□□ -1.01
CDCA3-212ENST00000604599 C19orf84I3L1E1 186 aa8.77□□□□□ -1.01
CDCA3-212ENST00000604599 DEFB112Q30KQ8 113 aa8.77□□□□□ -1.01
CDCA3-212ENST00000604599 Q6ZTI0 123 aa8.77□□□□□ -1.01
CDCA3-212ENST00000604599 MSMBP08118 114 aa8.76□□□□□ -1.01
CDCA3-212ENST00000604599 IGHV4-30-2A0A087WSY4 118 aa8.76□□□□□ -1.01
CDCA3-212ENST00000604599 USP9YO00507 2555 aaPredicted RBP8.75□□□□□ -1.01
CDCA3-212ENST00000604599 NDUFC2O95298 119 aa8.74□□□□□ -1.01
CDCA3-212ENST00000604599 RNASE1P07998 156 aaKnown RBP8.74□□□□□ -1.01
CDCA3-212ENST00000604599 JMJD1CQ15652 2540 aa8.74□□□□□ -1.01
CDCA3-212ENST00000604599 TRBV10-1A0A0K0K1A3 114 aa8.74□□□□□ -1.01
CDCA3-212ENST00000604599 LOC100131303A0A0U1RQF7 123 aa8.74□□□□□ -1.01
CDCA3-212ENST00000604599 S100A7L2Q5SY68 101 aa8.74□□□□□ -1.01
CDCA3-212ENST00000604599 FAM236DA0A1B0GTK5 79 aa8.73□□□□□ -1.01
CDCA3-212ENST00000604599 TRBV6-4A0A1B0GX49 114 aa8.73□□□□□ -1.01
CDCA3-212ENST00000604599 FAM236CP0DP71 79 aa8.73□□□□□ -1.01
CDCA3-212ENST00000604599 KHDC1LQ5JSQ8 128 aa8.73□□□□□ -1.01
CDCA3-212ENST00000604599 IBA57-AS1B1ANH7 110 aa8.73□□□□□ -1.01
CDCA3-212ENST00000604599 IGLV4-60A0A075B6I1 120 aa8.72□□□□□ -1.01
CDCA3-212ENST00000604599 XCL1P47992 114 aa8.72□□□□□ -1.01
CDCA3-212ENST00000604599 MXRA5Q9NR99 2828 aa8.72□□□□□ -1.01
CDCA3-212ENST00000604599 TLN2Q9Y4G6 2542 aa8.72□□□□□ -1.01
CDCA3-212ENST00000604599 C1orf158Q8N1D5 194 aa8.72□□□□□ -1.01
CDCA3-212ENST00000604599 PRR3P79522 188 aaKnown RBP8.71□□□□□ -1.01
CDCA3-212ENST00000604599 ATP5EP2Q5VTU8 51 aa8.71□□□□□ -1.01
CDCA3-212ENST00000604599 DYNLRB2Q8TF09 96 aa8.71□□□□□ -1.01
CDCA3-212ENST00000604599 CHD6Q8TD26 2715 aa8.71□□□□□ -1.01
CDCA3-212ENST00000604599 IGHV3OR16-9A0A0B4J2B5 98 aa8.71□□□□□ -1.02
CDCA3-212ENST00000604599 NDUFC2-KCTD14E9PQ53 114 aa8.71□□□□□ -1.02
CDCA3-212ENST00000604599 JMJD7-PLA2G4BH0Y9G9 81 aa8.7□□□□□ -1.02
CDCA3-212ENST00000604599 CCL19Q99731 98 aa8.7□□□□□ -1.02
CDCA3-212ENST00000604599 UBL5Q9BZL1 73 aa8.7□□□□□ -1.02
CDCA3-212ENST00000604599 LY6G6DO95868 133 aa8.7□□□□□ -1.02
CDCA3-212ENST00000604599 NOP10Q9NPE3 64 aaKnown RBP8.7□□□□□ -1.02
CDCA3-212ENST00000604599 Q8N814 137 aa8.69□□□□□ -1.02
CDCA3-212ENST00000604599 NBL1P41271 181 aa8.69□□□□□ -1.02
CDCA3-212ENST00000604599 UCNP55089 124 aa8.69□□□□□ -1.02
CDCA3-212ENST00000604599 C6orf226Q5I0X4 101 aa8.69□□□□□ -1.02
CDCA3-212ENST00000604599 IL17DQ8TAD2 202 aa8.69□□□□□ -1.02
CDCA3-212ENST00000604599 USP9XQ93008 2570 aaPredicted RBP8.69□□□□□ -1.02
CDCA3-212ENST00000604599 A0A096LNT2 108 aa8.68□□□□□ -1.02
CDCA3-212ENST00000604599 H7BZZ5 65 aa8.68□□□□□ -1.02
CDCA3-212ENST00000604599 ITPR1Q14643 2758 aa8.68□□□□□ -1.02
CDCA3-212ENST00000604599 STHQ8IWL8 128 aa8.68□□□□□ -1.02
CDCA3-212ENST00000604599 A0A087WZ39 114 aa8.67□□□□□ -1.02
CDCA3-212ENST00000604599 TMEM256-PLSCR3K7ERE1 68 aa8.67□□□□□ -1.02
CDCA3-212ENST00000604599 LINC00336Q6ZUF6 198 aa8.67□□□□□ -1.02
CDCA3-212ENST00000604599 NANOS2P60321 138 aaKnown RBP8.67□□□□□ -1.02
CDCA3-212ENST00000604599 ODF3L2Q3SX64 289 aa8.67□□□□□ -1.02
CDCA3-212ENST00000604599 LYPD5Q6UWN5 251 aa8.67□□□□□ -1.02
CDCA3-212ENST00000604599 ZNF702PQ9H963 129 aa8.67□□□□□ -1.02
CDCA3-212ENST00000604599 TRGV2A0A075B6R0 118 aa8.67□□□□□ -1.02
CDCA3-212ENST00000604599 B4DSR2 109 aa8.67□□□□□ -1.02
CDCA3-212ENST00000604599 MRAPQ8TCY5 172 aa8.67□□□□□ -1.02
CDCA3-212ENST00000604599 SNURFQ9Y675 71 aa8.67□□□□□ -1.02
CDCA3-212ENST00000604599 TMEM86BQ8N661 226 aa8.66□□□□□ -1.02
CDCA3-212ENST00000604599 LINC00167Q96N53 147 aa8.66□□□□□ -1.02
CDCA3-212ENST00000604599 FBN2P35556 2912 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms