RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 YPEL4Q96NS1 127 aa10.05□□□□□ -0.8
RPS28-203ENST00000600659 MRPL18Q9H0U6 180 aaKnown RBP10.05□□□□□ -0.8
RPS28-203ENST00000600659 CYSLTR1Q9Y271 337 aa10.05□□□□□ -0.8
RPS28-203ENST00000600659 IFITM10A6NMD0 228 aa10.04□□□□□ -0.8
RPS28-203ENST00000600659 COX7A2LO14548 114 aa10.04□□□□□ -0.8
RPS28-203ENST00000600659 CHTF8P0CG12 524 aa10.04□□□□□ -0.8
RPS28-203ENST00000600659 ZC2HC1BQ5TFG8 222 aa10.04□□□□□ -0.8
RPS28-203ENST00000600659 C5orf38Q86SI9 138 aa10.04□□□□□ -0.8
RPS28-203ENST00000600659 TMEM141Q96I45 108 aa10.04□□□□□ -0.8
RPS28-203ENST00000600659 AMELXQ99217 191 aa10.04□□□□□ -0.8
RPS28-203ENST00000600659 PRSS3P2Q8NHM4 247 aa10.03□□□□□ -0.8
RPS28-203ENST00000600659 SPACA4Q8TDM5 124 aa10.03□□□□□ -0.8
RPS28-203ENST00000600659 PKHD1L1Q86WI1 4243 aa10.02□□□□□ -0.8
RPS28-203ENST00000600659 FAM229AH3BQW9 127 aa10.02□□□□□ -0.81
RPS28-203ENST00000600659 COX6A2Q02221 97 aa10.02□□□□□ -0.81
RPS28-203ENST00000600659 LINC00242Q5T6M2 205 aa10.02□□□□□ -0.81
RPS28-203ENST00000600659 IGLV4-69A0A075B6H9 119 aa10.01□□□□□ -0.81
RPS28-203ENST00000600659 NPSP0C0P6 89 aa10.01□□□□□ -0.81
RPS28-203ENST00000600659 UBE2D1P51668 147 aa10.01□□□□□ -0.81
RPS28-203ENST00000600659 FABP9Q0Z7S8 132 aa10.01□□□□□ -0.81
RPS28-203ENST00000600659 TOMM6Q96B49 74 aa10.01□□□□□ -0.81
RPS28-203ENST00000600659 URB1-AS1Q96HZ7 61 aa10.01□□□□□ -0.81
RPS28-203ENST00000600659 CARD19Q96LW7 228 aa10□□□□□ -0.81
RPS28-203ENST00000600659 LRP1Q07954 4544 aaKnown RBP9.99□□□□□ -0.81
RPS28-203ENST00000600659 INAFM2P0DMQ5 153 aa9.99□□□□□ -0.81
RPS28-203ENST00000600659 MALP21145 153 aa9.99□□□□□ -0.81
RPS28-203ENST00000600659 SYCNQ0VAF6 134 aa9.99□□□□□ -0.81
RPS28-203ENST00000600659 TEX43Q6ZNM6 134 aa9.99□□□□□ -0.81
RPS28-203ENST00000600659 Q6ZRU5 148 aa9.99□□□□□ -0.81
RPS28-203ENST00000600659 TIMM17AQ99595 171 aa9.99□□□□□ -0.81
RPS28-203ENST00000600659 FAT3Q8TDW7 4589 aa9.98□□□□□ -0.81
RPS28-203ENST00000600659 A0A087WYN8 130 aa9.98□□□□□ -0.81
RPS28-203ENST00000600659 A0A096LNI7 61 aa9.98□□□□□ -0.81
RPS28-203ENST00000600659 A0A096LNJ9 63 aa9.98□□□□□ -0.81
RPS28-203ENST00000600659 ZNF561-AS1K7EIQ3 104 aa9.98□□□□□ -0.81
RPS28-203ENST00000600659 FAM19A3Q7Z5A8 133 aa9.98□□□□□ -0.81
RPS28-203ENST00000600659 TRAPPC1Q9Y5R8 145 aa9.98□□□□□ -0.81
RPS28-203ENST00000600659 A0A087WZ39 114 aa9.97□□□□□ -0.81
RPS28-203ENST00000600659 SPAG11BQ08648 103 aa9.97□□□□□ -0.81
RPS28-203ENST00000600659 OR10D4PQ8NGN7 298 aa9.97□□□□□ -0.81
RPS28-203ENST00000600659 C18orf32Q8TCD1 76 aa9.97□□□□□ -0.81
RPS28-203ENST00000600659 C2orf48Q96LS8 159 aa9.97□□□□□ -0.81
RPS28-203ENST00000600659 PLAC8Q9NZF1 115 aa9.97□□□□□ -0.81
RPS28-203ENST00000600659 KIAA0087Q14695 138 aa9.96□□□□□ -0.82
RPS28-203ENST00000600659 ORAOV1Q8WV07 137 aa9.96□□□□□ -0.82
RPS28-203ENST00000600659 SMCO4Q9NRQ5 59 aa9.96□□□□□ -0.82
RPS28-203ENST00000600659 IGKV2-24A0A0C4DH68 120 aa9.95□□□□□ -0.82
RPS28-203ENST00000600659 APOMO95445 188 aa9.95□□□□□ -0.82
RPS28-203ENST00000600659 G0S2P27469 103 aa9.95□□□□□ -0.82
RPS28-203ENST00000600659 Q6ZN92 141 aa9.95□□□□□ -0.82
RPS28-203ENST00000600659 ERASQ7Z444 233 aa9.95□□□□□ -0.82
RPS28-203ENST00000600659 CBLN2Q8IUK8 224 aa9.95□□□□□ -0.82
RPS28-203ENST00000600659 VCX2Q9H322 139 aa9.95□□□□□ -0.82
RPS28-203ENST00000600659 PLA2G1BP04054 148 aaKnown RBP9.94□□□□□ -0.82
RPS28-203ENST00000600659 CAMK2N2Q96S95 79 aa9.94□□□□□ -0.82
RPS28-203ENST00000600659 C2orf88Q9BSF0 95 aa9.94□□□□□ -0.82
RPS28-203ENST00000600659 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.93□□□□□ -0.82
RPS28-203ENST00000600659 C10orf25Q5T742 122 aa9.93□□□□□ -0.82
RPS28-203ENST00000600659 FA2HQ7L5A8 372 aa9.93□□□□□ -0.82
RPS28-203ENST00000600659 MAJINQ3KP22 176 aa9.92□□□□□ -0.82
RPS28-203ENST00000600659 LINC01561Q8N1V8 128 aa9.92□□□□□ -0.82
RPS28-203ENST00000600659 SCGB3A1Q96QR1 104 aa9.92□□□□□ -0.82
RPS28-203ENST00000600659 HERC1Q15751 4861 aa9.92□□□□□ -0.82
RPS28-203ENST00000600659 A0A0J9YXV3 536 aa9.91□□□□□ -0.82
RPS28-203ENST00000600659 HNRNPA3P51991 378 aaKnown RBP9.91□□□□□ -0.82
RPS28-203ENST00000600659 PAPPA-AS1Q5QFB9 102 aa9.91□□□□□ -0.82
RPS28-203ENST00000600659 MRPL35Q9NZE8 188 aaKnown RBP9.91□□□□□ -0.82
RPS28-203ENST00000600659 PTTG1IPP53801 180 aa9.9□□□□□ -0.82
RPS28-203ENST00000600659 RNF151Q2KHN1 245 aa9.9□□□□□ -0.82
RPS28-203ENST00000600659 STPG4Q8N801 248 aa9.9□□□□□ -0.82
RPS28-203ENST00000600659 CDKN2A-AS1Q9UH64 79 aa9.9□□□□□ -0.82
RPS28-203ENST00000600659 LOC107984640A0A0U1RRK4 108 aa9.89□□□□□ -0.83
RPS28-203ENST00000600659 LINC01549A6NIU2 74 aa9.89□□□□□ -0.83
RPS28-203ENST00000600659 RPL37AP61513 92 aaKnown RBP9.89□□□□□ -0.83
RPS28-203ENST00000600659 UNQ6190/PRO20217Q6UXQ8 127 aa9.89□□□□□ -0.83
RPS28-203ENST00000600659 C6orf48Q9UBA6 75 aa9.89□□□□□ -0.83
RPS28-203ENST00000600659 IGLV5-45A0A087WSX0 123 aa9.88□□□□□ -0.83
RPS28-203ENST00000600659 F8WDY8 70 aa9.88□□□□□ -0.83
RPS28-203ENST00000600659 LINC00614P0C842 121 aa9.88□□□□□ -0.83
RPS28-203ENST00000600659 HERVK_113P63121 156 aa9.88□□□□□ -0.83
RPS28-203ENST00000600659 NDUFA1O15239 70 aa9.87□□□□□ -0.83
RPS28-203ENST00000600659 PMCHL1Q16048 86 aa9.87□□□□□ -0.83
RPS28-203ENST00000600659 PDZD11Q5EBL8 140 aa9.87□□□□□ -0.83
RPS28-203ENST00000600659 C2orf82Q6UX34 121 aa9.87□□□□□ -0.83
RPS28-203ENST00000600659 CST9LQ9H4G1 147 aa9.87□□□□□ -0.83
RPS28-203ENST00000600659 LINC00474Q9P2X8 69 aa9.87□□□□□ -0.83
RPS28-203ENST00000600659 PKIGQ9Y2B9 76 aa9.87□□□□□ -0.83
RPS28-203ENST00000600659 DMBT1Q9UGM3 2413 aaPredicted RBP9.87□□□□□ -0.83
RPS28-203ENST00000600659 TINCRA0A1B0GVN0 87 aa9.86□□□□□ -0.83
RPS28-203ENST00000600659 A0A1W2PNN7 141 aa9.86□□□□□ -0.83
RPS28-203ENST00000600659 TLX1NBP0CAT3 122 aa9.86□□□□□ -0.83
RPS28-203ENST00000600659 GAGE2BQ13066 116 aa9.86□□□□□ -0.83
RPS28-203ENST00000600659 HBDP02042 147 aa9.85□□□□□ -0.83
RPS28-203ENST00000600659 RAB5BP61020 215 aa9.85□□□□□ -0.83
RPS28-203ENST00000600659 SEC11AP67812 179 aa9.85□□□□□ -0.83
RPS28-203ENST00000600659 PMVKQ15126 192 aa9.85□□□□□ -0.83
RPS28-203ENST00000600659 DPH3Q96FX2 82 aa9.85□□□□□ -0.83
RPS28-203ENST00000600659 SMIM1B2RUZ4 78 aa9.84□□□□□ -0.83
RPS28-203ENST00000600659 RPL18AQ02543 176 aaKnown RBP9.84□□□□□ -0.83
RPS28-203ENST00000600659 Q6ZRP5 223 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms