RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 LINC00173Q6ZV60 143 aa6.99□□□□□ -1.29
SHKBP1-206ENST00000595523 C5orf38Q86SI9 138 aa6.99□□□□□ -1.29
SHKBP1-206ENST00000595523 SPACA4Q8TDM5 124 aa6.99□□□□□ -1.29
SHKBP1-206ENST00000595523 ALKBH7Q9BT30 221 aaPredicted RBP6.99□□□□□ -1.29
SHKBP1-206ENST00000595523 NXT2Q9NPJ8 142 aaKnown RBP6.99□□□□□ -1.29
SHKBP1-206ENST00000595523 IGLV4-69A0A075B6H9 119 aa6.98□□□□□ -1.29
SHKBP1-206ENST00000595523 TGIF2-C20orf24A0A0A6YYL0 155 aa6.98□□□□□ -1.29
SHKBP1-206ENST00000595523 K7EMI3 77 aa6.98□□□□□ -1.29
SHKBP1-206ENST00000595523 APOC3P02656 99 aa6.98□□□□□ -1.29
SHKBP1-206ENST00000595523 MALP21145 153 aa6.98□□□□□ -1.29
SHKBP1-206ENST00000595523 ORMDL2Q53FV1 153 aa6.98□□□□□ -1.29
SHKBP1-206ENST00000595523 ZC2HC1BQ5TFG8 222 aa6.98□□□□□ -1.29
SHKBP1-206ENST00000595523 TMEM141Q96I45 108 aa6.98□□□□□ -1.29
SHKBP1-206ENST00000595523 CYSLTR1Q9Y271 337 aa6.98□□□□□ -1.29
SHKBP1-206ENST00000595523 FAT3Q8TDW7 4589 aa6.97□□□□□ -1.29
SHKBP1-206ENST00000595523 A0A087WYN8 130 aa6.97□□□□□ -1.29
SHKBP1-206ENST00000595523 LINC01546A6NGU7 62 aa6.97□□□□□ -1.29
SHKBP1-206ENST00000595523 IGIPA6NJ69 53 aa6.97□□□□□ -1.29
SHKBP1-206ENST00000595523 PLA2G1BP04054 148 aaKnown RBP6.97□□□□□ -1.29
SHKBP1-206ENST00000595523 COX19Q49B96 90 aa6.97□□□□□ -1.29
SHKBP1-206ENST00000595523 LINC00242Q5T6M2 205 aa6.97□□□□□ -1.29
SHKBP1-206ENST00000595523 CARD19Q96LW7 228 aa6.97□□□□□ -1.29
SHKBP1-206ENST00000595523 AMELXQ99217 191 aa6.97□□□□□ -1.29
SHKBP1-206ENST00000595523 MRPL18Q9H0U6 180 aaKnown RBP6.97□□□□□ -1.29
SHKBP1-206ENST00000595523 A0A096LNI7 61 aa6.96□□□□□ -1.3
SHKBP1-206ENST00000595523 ZNF561-AS1K7EIQ3 104 aa6.96□□□□□ -1.3
SHKBP1-206ENST00000595523 MT-ND6P03923 174 aa6.96□□□□□ -1.3
SHKBP1-206ENST00000595523 SYCNQ0VAF6 134 aa6.96□□□□□ -1.3
SHKBP1-206ENST00000595523 Q6ZRU5 148 aa6.96□□□□□ -1.3
SHKBP1-206ENST00000595523 IGKV2-24A0A0C4DH68 120 aa6.95□□□□□ -1.3
SHKBP1-206ENST00000595523 SNAPINO95295 136 aa6.95□□□□□ -1.3
SHKBP1-206ENST00000595523 UBE2D1P51668 147 aa6.95□□□□□ -1.3
SHKBP1-206ENST00000595523 FABP9Q0Z7S8 132 aa6.95□□□□□ -1.3
SHKBP1-206ENST00000595523 TEX43Q6ZNM6 134 aa6.95□□□□□ -1.3
SHKBP1-206ENST00000595523 SVBPQ8N300 66 aa6.95□□□□□ -1.3
SHKBP1-206ENST00000595523 TOMM6Q96B49 74 aa6.95□□□□□ -1.3
SHKBP1-206ENST00000595523 YPEL4Q96NS1 127 aa6.95□□□□□ -1.3
SHKBP1-206ENST00000595523 PLAC8Q9NZF1 115 aa6.95□□□□□ -1.3
SHKBP1-206ENST00000595523 APOMO95445 188 aa6.94□□□□□ -1.3
SHKBP1-206ENST00000595523 NPSP0C0P6 89 aa6.94□□□□□ -1.3
SHKBP1-206ENST00000595523 SPAG11BQ08648 103 aa6.94□□□□□ -1.3
SHKBP1-206ENST00000595523 SLC7A5P1Q8MH63 180 aa6.94□□□□□ -1.3
SHKBP1-206ENST00000595523 OR10D4PQ8NGN7 298 aa6.94□□□□□ -1.3
SHKBP1-206ENST00000595523 ORAOV1Q8WV07 137 aa6.94□□□□□ -1.3
SHKBP1-206ENST00000595523 C2orf48Q96LS8 159 aa6.94□□□□□ -1.3
SHKBP1-206ENST00000595523 A0A087WZ39 114 aa6.93□□□□□ -1.3
SHKBP1-206ENST00000595523 MAJINQ3KP22 176 aa6.93□□□□□ -1.3
SHKBP1-206ENST00000595523 FAM19A3Q7Z5A8 133 aa6.93□□□□□ -1.3
SHKBP1-206ENST00000595523 URB1-AS1Q96HZ7 61 aa6.93□□□□□ -1.3
SHKBP1-206ENST00000595523 CAMK2N2Q96S95 79 aa6.93□□□□□ -1.3
SHKBP1-206ENST00000595523 TIMM17AQ99595 171 aa6.93□□□□□ -1.3
SHKBP1-206ENST00000595523 HNRNPA3P51991 378 aaKnown RBP6.92□□□□□ -1.3
SHKBP1-206ENST00000595523 RPL37AP61513 92 aaKnown RBP6.92□□□□□ -1.3
SHKBP1-206ENST00000595523 KIAA0087Q14695 138 aa6.92□□□□□ -1.3
SHKBP1-206ENST00000595523 C10orf25Q5T742 122 aa6.92□□□□□ -1.3
SHKBP1-206ENST00000595523 Q6ZN92 141 aa6.92□□□□□ -1.3
SHKBP1-206ENST00000595523 C2orf88Q9BSF0 95 aa6.92□□□□□ -1.3
SHKBP1-206ENST00000595523 VCX2Q9H322 139 aa6.92□□□□□ -1.3
SHKBP1-206ENST00000595523 TRAPPC1Q9Y5R8 145 aa6.92□□□□□ -1.3
SHKBP1-206ENST00000595523 A0A096LNJ9 63 aa6.91□□□□□ -1.3
SHKBP1-206ENST00000595523 A0A0J9YXV3 536 aa6.91□□□□□ -1.3
SHKBP1-206ENST00000595523 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.91□□□□□ -1.3
SHKBP1-206ENST00000595523 PTTG1IPP53801 180 aa6.91□□□□□ -1.3
SHKBP1-206ENST00000595523 ERASQ7Z444 233 aa6.91□□□□□ -1.3
SHKBP1-206ENST00000595523 STPG4Q8N801 248 aa6.91□□□□□ -1.3
SHKBP1-206ENST00000595523 C18orf32Q8TCD1 76 aa6.91□□□□□ -1.3
SHKBP1-206ENST00000595523 DPH3Q96FX2 82 aa6.91□□□□□ -1.3
SHKBP1-206ENST00000595523 LOC107984640A0A0U1RRK4 108 aa6.9□□□□□ -1.3
SHKBP1-206ENST00000595523 G0S2P27469 103 aa6.9□□□□□ -1.3
SHKBP1-206ENST00000595523 UNQ6190/PRO20217Q6UXQ8 127 aa6.9□□□□□ -1.3
SHKBP1-206ENST00000595523 SCGB3A1Q96QR1 104 aa6.9□□□□□ -1.3
SHKBP1-206ENST00000595523 MRPL35Q9NZE8 188 aaKnown RBP6.9□□□□□ -1.3
SHKBP1-206ENST00000595523 RNF151Q2KHN1 245 aa6.89□□□□□ -1.31
SHKBP1-206ENST00000595523 PAPPA-AS1Q5QFB9 102 aa6.89□□□□□ -1.31
SHKBP1-206ENST00000595523 FA2HQ7L5A8 372 aa6.89□□□□□ -1.31
SHKBP1-206ENST00000595523 CBLN2Q8IUK8 224 aa6.89□□□□□ -1.31
SHKBP1-206ENST00000595523 LINC01561Q8N1V8 128 aa6.89□□□□□ -1.31
SHKBP1-206ENST00000595523 LINC00474Q9P2X8 69 aa6.89□□□□□ -1.31
SHKBP1-206ENST00000595523 C6orf48Q9UBA6 75 aa6.89□□□□□ -1.31
SHKBP1-206ENST00000595523 PKIGQ9Y2B9 76 aa6.89□□□□□ -1.31
SHKBP1-206ENST00000595523 F8WDY8 70 aa6.88□□□□□ -1.31
SHKBP1-206ENST00000595523 NDUFA1O15239 70 aa6.88□□□□□ -1.31
SHKBP1-206ENST00000595523 GAGE2BQ13066 116 aa6.88□□□□□ -1.31
SHKBP1-206ENST00000595523 C2orf82Q6UX34 121 aa6.88□□□□□ -1.31
SHKBP1-206ENST00000595523 SMCO4Q9NRQ5 59 aa6.88□□□□□ -1.31
SHKBP1-206ENST00000595523 CDKN2A-AS1Q9UH64 79 aa6.88□□□□□ -1.31
SHKBP1-206ENST00000595523 A0A1W2PNN7 141 aa6.87□□□□□ -1.31
SHKBP1-206ENST00000595523 HERVK_113P63121 156 aa6.87□□□□□ -1.31
SHKBP1-206ENST00000595523 RPL18AQ02543 176 aaKnown RBP6.87□□□□□ -1.31
SHKBP1-206ENST00000595523 LINC01549A6NIU2 74 aa6.86□□□□□ -1.31
SHKBP1-206ENST00000595523 KRTAP29-1A8MX34 341 aaPredicted RBP6.86□□□□□ -1.31
SHKBP1-206ENST00000595523 LINC00614P0C842 121 aa6.86□□□□□ -1.31
SHKBP1-206ENST00000595523 TLX1NBP0CAT3 122 aa6.86□□□□□ -1.31
SHKBP1-206ENST00000595523 SEC11AP67812 179 aa6.86□□□□□ -1.31
SHKBP1-206ENST00000595523 PMCHL1Q16048 86 aa6.86□□□□□ -1.31
SHKBP1-206ENST00000595523 Q6ZRP5 223 aa6.86□□□□□ -1.31
SHKBP1-206ENST00000595523 CST9LQ9H4G1 147 aa6.86□□□□□ -1.31
SHKBP1-206ENST00000595523 IGLV5-45A0A087WSX0 123 aa6.85□□□□□ -1.31
SHKBP1-206ENST00000595523 TINCRA0A1B0GVN0 87 aa6.85□□□□□ -1.31
SHKBP1-206ENST00000595523 PRR3P79522 188 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms