RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SMAGPQ0VAQ4 97 aa9.17□□□□□ -0.94
PNKP-202ENST00000593706 TMEM136Q6ZRR5 245 aa9.17□□□□□ -0.94
PNKP-202ENST00000593706 PRELID3AQ96N28 172 aa9.17□□□□□ -0.94
PNKP-202ENST00000593706 SPANXA1Q9NS26 97 aa9.17□□□□□ -0.94
PNKP-202ENST00000593706 ZNF561-AS1K7EIQ3 104 aa9.16□□□□□ -0.94
PNKP-202ENST00000593706 MRPS36P82909 103 aaKnown RBP9.16□□□□□ -0.94
PNKP-202ENST00000593706 Q6ZRP5 223 aa9.16□□□□□ -0.94
PNKP-202ENST00000593706 TMEM18Q96B42 140 aa9.16□□□□□ -0.94
PNKP-202ENST00000593706 LAMTOR2Q9Y2Q5 125 aa9.16□□□□□ -0.94
PNKP-202ENST00000593706 TRAV13-1A0A0B4J241 112 aa9.15□□□□□ -0.94
PNKP-202ENST00000593706 IMMP2LQ96T52 175 aa9.15□□□□□ -0.94
PNKP-202ENST00000593706 COX7A2LO14548 114 aa9.14□□□□□ -0.95
PNKP-202ENST00000593706 SYCNQ0VAF6 134 aa9.14□□□□□ -0.95
PNKP-202ENST00000593706 OPRPNQ99935 248 aaPredicted RBP9.14□□□□□ -0.95
PNKP-202ENST00000593706 SEC11CQ9BY50 192 aa9.14□□□□□ -0.95
PNKP-202ENST00000593706 KRTAP10-8P60410 259 aa9.13□□□□□ -0.95
PNKP-202ENST00000593706 C10orf91Q5T1B1 145 aa9.13□□□□□ -0.95
PNKP-202ENST00000593706 IGHV3OR16-9A0A0B4J2B5 98 aa9.12□□□□□ -0.95
PNKP-202ENST00000593706 PTTG1IPP53801 180 aa9.12□□□□□ -0.95
PNKP-202ENST00000593706 GAGE2BQ13066 116 aa9.12□□□□□ -0.95
PNKP-202ENST00000593706 PYGO1Q9Y3Y4 419 aa9.12□□□□□ -0.95
PNKP-202ENST00000593706 LOC107984640A0A0U1RRK4 108 aa9.11□□□□□ -0.95
PNKP-202ENST00000593706 MALP21145 153 aa9.11□□□□□ -0.95
PNKP-202ENST00000593706 CTDSP1Q9GZU7 261 aa9.11□□□□□ -0.95
PNKP-202ENST00000593706 LPAP08519 4548 aa9.1□□□□□ -0.95
PNKP-202ENST00000593706 IGLV4-69A0A075B6H9 119 aa9.1□□□□□ -0.95
PNKP-202ENST00000593706 IGLV4-3A0A075B6K6 122 aa9.1□□□□□ -0.95
PNKP-202ENST00000593706 RAB5AP20339 215 aa9.1□□□□□ -0.95
PNKP-202ENST00000593706 SRSF9Q13242 221 aaKnown RBP eCLIP9.1□□□□□ -0.95
PNKP-202ENST00000593706 C5orf38Q86SI9 138 aa9.1□□□□□ -0.95
PNKP-202ENST00000593706 Q8N8P6 123 aa9.1□□□□□ -0.95
PNKP-202ENST00000593706 MAP1LC3AQ9H492 121 aa9.1□□□□□ -0.95
PNKP-202ENST00000593706 CARHSP1Q9Y2V2 147 aaKnown RBP9.1□□□□□ -0.95
PNKP-202ENST00000593706 TRAV9-1A0A075B6T8 112 aa9.09□□□□□ -0.95
PNKP-202ENST00000593706 LOC389332A0A1B0GUA5 103 aa9.09□□□□□ -0.95
PNKP-202ENST00000593706 CAMK2N2Q96S95 79 aa9.09□□□□□ -0.95
PNKP-202ENST00000593706 IFITM10A6NMD0 228 aa9.08□□□□□ -0.96
PNKP-202ENST00000593706 MT-ND6P03923 174 aa9.08□□□□□ -0.96
PNKP-202ENST00000593706 RPL18AQ02543 176 aaKnown RBP9.08□□□□□ -0.96
PNKP-202ENST00000593706 LINC00173Q6ZV60 143 aa9.08□□□□□ -0.96
PNKP-202ENST00000593706 C2orf48Q96LS8 159 aa9.08□□□□□ -0.96
PNKP-202ENST00000593706 K7EMI3 77 aa9.07□□□□□ -0.96
PNKP-202ENST00000593706 APOMO95445 188 aa9.07□□□□□ -0.96
PNKP-202ENST00000593706 IFI27P40305 119 aaPredicted RBP9.07□□□□□ -0.96
PNKP-202ENST00000593706 OR10D4PQ8NGN7 298 aa9.07□□□□□ -0.96
PNKP-202ENST00000593706 SPAG11BQ08648 103 aa9.06□□□□□ -0.96
PNKP-202ENST00000593706 LINC00242Q5T6M2 205 aa9.06□□□□□ -0.96
PNKP-202ENST00000593706 C2orf66Q6UXQ4 117 aa9.06□□□□□ -0.96
PNKP-202ENST00000593706 TMEM141Q96I45 108 aa9.06□□□□□ -0.96
PNKP-202ENST00000593706 NXT2Q9NPJ8 142 aaKnown RBP9.06□□□□□ -0.96
PNKP-202ENST00000593706 PSORS1C2Q9UIG4 136 aa9.06□□□□□ -0.96
PNKP-202ENST00000593706 CYSLTR1Q9Y271 337 aa9.06□□□□□ -0.96
PNKP-202ENST00000593706 A0A1W2PNN7 141 aa9.05□□□□□ -0.96
PNKP-202ENST00000593706 IGIPA6NJ69 53 aa9.05□□□□□ -0.96
PNKP-202ENST00000593706 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.05□□□□□ -0.96
PNKP-202ENST00000593706 NPSP0C0P6 89 aa9.05□□□□□ -0.96
PNKP-202ENST00000593706 UBE2D1P51668 147 aa9.05□□□□□ -0.96
PNKP-202ENST00000593706 ORMDL2Q53FV1 153 aa9.05□□□□□ -0.96
PNKP-202ENST00000593706 C9orf116Q5BN46 136 aaPredicted RBP9.05□□□□□ -0.96
PNKP-202ENST00000593706 AMELXQ99217 191 aa9.05□□□□□ -0.96
PNKP-202ENST00000593706 A0A087WZ39 114 aa9.04□□□□□ -0.96
PNKP-202ENST00000593706 KIAA1644Q3SXP7 199 aa9.04□□□□□ -0.96
PNKP-202ENST00000593706 C1orf137Q5JT78 98 aa9.04□□□□□ -0.96
PNKP-202ENST00000593706 ORAOV1Q8WV07 137 aa9.04□□□□□ -0.96
PNKP-202ENST00000593706 GNB1LQ9BYB4 327 aa9.04□□□□□ -0.96
PNKP-202ENST00000593706 KIAA0087Q14695 138 aa9.03□□□□□ -0.96
PNKP-202ENST00000593706 RHEBQ15382 184 aa9.03□□□□□ -0.96
PNKP-202ENST00000593706 RNF151Q2KHN1 245 aa9.03□□□□□ -0.96
PNKP-202ENST00000593706 ZC2HC1BQ5TFG8 222 aa9.03□□□□□ -0.96
PNKP-202ENST00000593706 RPS10P5Q9NQ39 176 aa9.03□□□□□ -0.96
PNKP-202ENST00000593706 LINC01546A6NGU7 62 aa9.02□□□□□ -0.97
PNKP-202ENST00000593706 F8WDY8 70 aa9.02□□□□□ -0.97
PNKP-202ENST00000593706 C10orf25Q5T742 122 aa9.02□□□□□ -0.97
PNKP-202ENST00000593706 TEX43Q6ZNM6 134 aa9.02□□□□□ -0.97
PNKP-202ENST00000593706 PHF5AQ7RTV0 110 aaKnown RBP9.02□□□□□ -0.97
PNKP-202ENST00000593706 FAM19A3Q7Z5A8 133 aa9.02□□□□□ -0.97
PNKP-202ENST00000593706 MRPL35Q9NZE8 188 aaKnown RBP9.02□□□□□ -0.97
PNKP-202ENST00000593706 TGIF2-C20orf24A0A0A6YYL0 155 aa9.01□□□□□ -0.97
PNKP-202ENST00000593706 APOC3P02656 99 aa9.01□□□□□ -0.97
PNKP-202ENST00000593706 S100PP25815 95 aa9.01□□□□□ -0.97
PNKP-202ENST00000593706 TOMM6Q96B49 74 aa9.01□□□□□ -0.97
PNKP-202ENST00000593706 ALKBH7Q9BT30 221 aaPredicted RBP9.01□□□□□ -0.97
PNKP-202ENST00000593706 LINC01561Q8N1V8 128 aa9□□□□□ -0.97
PNKP-202ENST00000593706 TIMM17AQ99595 171 aa9□□□□□ -0.97
PNKP-202ENST00000593706 UNQ6190/PRO20217Q6UXQ8 127 aa8.99□□□□□ -0.97
PNKP-202ENST00000593706 Q6ZN92 141 aa8.99□□□□□ -0.97
PNKP-202ENST00000593706 DIRC1Q969H9 104 aa8.99□□□□□ -0.97
PNKP-202ENST00000593706 C2orf88Q9BSF0 95 aa8.99□□□□□ -0.97
PNKP-202ENST00000593706 C6orf48Q9UBA6 75 aa8.99□□□□□ -0.97
PNKP-202ENST00000593706 NDUFA1O15239 70 aa8.98□□□□□ -0.97
PNKP-202ENST00000593706 TLX1NBP0CAT3 122 aa8.98□□□□□ -0.97
PNKP-202ENST00000593706 VCX2Q9H322 139 aa8.98□□□□□ -0.97
PNKP-202ENST00000593706 IGLV7-43P04211 117 aa8.97□□□□□ -0.97
PNKP-202ENST00000593706 COX19Q49B96 90 aa8.97□□□□□ -0.97
PNKP-202ENST00000593706 PRR26Q8N8Z3 221 aa8.97□□□□□ -0.97
PNKP-202ENST00000593706 G0S2P27469 103 aa8.96□□□□□ -0.98
PNKP-202ENST00000593706 ERASQ7Z444 233 aa8.96□□□□□ -0.98
PNKP-202ENST00000593706 SVBPQ8N300 66 aa8.96□□□□□ -0.98
PNKP-202ENST00000593706 MRPL18Q9H0U6 180 aaKnown RBP8.96□□□□□ -0.98
PNKP-202ENST00000593706 H0Y9J4 135 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms