RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 IGLV4-3A0A075B6K6 122 aa12.65□□□□□ -0.38
CIRBP-239ENST00000592467 LOC389332A0A1B0GUA5 103 aa12.65□□□□□ -0.38
CIRBP-239ENST00000592467 RAB5AP20339 215 aa12.65□□□□□ -0.38
CIRBP-239ENST00000592467 Q8N8P6 123 aa12.65□□□□□ -0.38
CIRBP-239ENST00000592467 C2orf48Q96LS8 159 aa12.65□□□□□ -0.38
CIRBP-239ENST00000592467 MAP1LC3AQ9H492 121 aa12.65□□□□□ -0.38
CIRBP-239ENST00000592467 HMCN2Q8NDA2 5059 aa12.65□□□□□ -0.38
CIRBP-239ENST00000592467 IFITM10A6NMD0 228 aa12.63□□□□□ -0.39
CIRBP-239ENST00000592467 LINC00474Q9P2X8 69 aa12.63□□□□□ -0.39
CIRBP-239ENST00000592467 IFI27P40305 119 aaPredicted RBP12.62□□□□□ -0.39
CIRBP-239ENST00000592467 PTTG1IPP53801 180 aa12.62□□□□□ -0.39
CIRBP-239ENST00000592467 CAMK2N2Q96S95 79 aa12.62□□□□□ -0.39
CIRBP-239ENST00000592467 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.61□□□□□ -0.39
CIRBP-239ENST00000592467 APOMO95445 188 aa12.61□□□□□ -0.39
CIRBP-239ENST00000592467 SPAG11BQ08648 103 aa12.61□□□□□ -0.39
CIRBP-239ENST00000592467 OR10D4PQ8NGN7 298 aa12.61□□□□□ -0.39
CIRBP-239ENST00000592467 CTDSP1Q9GZU7 261 aa12.61□□□□□ -0.39
CIRBP-239ENST00000592467 PKIGQ9Y2B9 76 aa12.61□□□□□ -0.39
CIRBP-239ENST00000592467 LOC107984640A0A0U1RRK4 108 aa12.6□□□□□ -0.39
CIRBP-239ENST00000592467 LINC00242Q5T6M2 205 aa12.6□□□□□ -0.39
CIRBP-239ENST00000592467 LINC00173Q6ZV60 143 aa12.6□□□□□ -0.39
CIRBP-239ENST00000592467 SEC11CQ9BY50 192 aa12.6□□□□□ -0.39
CIRBP-239ENST00000592467 C2orf66Q6UXQ4 117 aa12.59□□□□□ -0.39
CIRBP-239ENST00000592467 C7orf33Q8WU49 177 aa12.59□□□□□ -0.39
CIRBP-239ENST00000592467 TMEM141Q96I45 108 aa12.59□□□□□ -0.39
CIRBP-239ENST00000592467 MT1HL1P0DM35 61 aa12.58□□□□□ -0.4
CIRBP-239ENST00000592467 PRR3P79522 188 aaKnown RBP12.58□□□□□ -0.4
CIRBP-239ENST00000592467 RNF151Q2KHN1 245 aa12.58□□□□□ -0.4
CIRBP-239ENST00000592467 ORAOV1Q8WV07 137 aa12.58□□□□□ -0.4
CIRBP-239ENST00000592467 TRAV9-1A0A075B6T8 112 aa12.57□□□□□ -0.4
CIRBP-239ENST00000592467 A0A087WZ39 114 aa12.57□□□□□ -0.4
CIRBP-239ENST00000592467 A0A0J9YXV3 536 aa12.57□□□□□ -0.4
CIRBP-239ENST00000592467 IGIPA6NJ69 53 aa12.57□□□□□ -0.4
CIRBP-239ENST00000592467 K7EMI3 77 aa12.57□□□□□ -0.4
CIRBP-239ENST00000592467 UBE2D1P51668 147 aa12.57□□□□□ -0.4
CIRBP-239ENST00000592467 KIAA0087Q14695 138 aa12.57□□□□□ -0.4
CIRBP-239ENST00000592467 KIAA1644Q3SXP7 199 aa12.57□□□□□ -0.4
CIRBP-239ENST00000592467 C10orf91Q5T1B1 145 aa12.57□□□□□ -0.4
CIRBP-239ENST00000592467 ZC2HC1BQ5TFG8 222 aa12.57□□□□□ -0.4
CIRBP-239ENST00000592467 AMELXQ99217 191 aa12.57□□□□□ -0.4
CIRBP-239ENST00000592467 CYSLTR1Q9Y271 337 aa12.57□□□□□ -0.4
CIRBP-239ENST00000592467 TNXBP22105 4242 aa12.56□□□□□ -0.4
CIRBP-239ENST00000592467 A0A1W2PNN7 141 aa12.56□□□□□ -0.4
CIRBP-239ENST00000592467 GAGE2BQ13066 116 aa12.56□□□□□ -0.4
CIRBP-239ENST00000592467 ORMDL2Q53FV1 153 aa12.56□□□□□ -0.4
CIRBP-239ENST00000592467 C10orf25Q5T742 122 aa12.56□□□□□ -0.4
CIRBP-239ENST00000592467 COMMD7Q86VX2 200 aa12.56□□□□□ -0.4
CIRBP-239ENST00000592467 MRPL35Q9NZE8 188 aaKnown RBP12.56□□□□□ -0.4
CIRBP-239ENST00000592467 F8WDY8 70 aa12.55□□□□□ -0.4
CIRBP-239ENST00000592467 NXT2Q9NPJ8 142 aaKnown RBP12.55□□□□□ -0.4
CIRBP-239ENST00000592467 NPSP0C0P6 89 aa12.54□□□□□ -0.4
CIRBP-239ENST00000592467 TEX43Q6ZNM6 134 aa12.54□□□□□ -0.4
CIRBP-239ENST00000592467 TGIF2-C20orf24A0A0A6YYL0 155 aa12.53□□□□□ -0.4
CIRBP-239ENST00000592467 UNQ6190/PRO20217Q6UXQ8 127 aa12.53□□□□□ -0.4
CIRBP-239ENST00000592467 FAM19A3Q7Z5A8 133 aa12.53□□□□□ -0.4
CIRBP-239ENST00000592467 C6orf48Q9UBA6 75 aa12.52□□□□□ -0.41
CIRBP-239ENST00000592467 CARHSP1Q9Y2V2 147 aaKnown RBP12.52□□□□□ -0.41
CIRBP-239ENST00000592467 NDUFA1O15239 70 aa12.51□□□□□ -0.41
CIRBP-239ENST00000592467 LINC01561Q8N1V8 128 aa12.51□□□□□ -0.41
CIRBP-239ENST00000592467 GNB1LQ9BYB4 327 aa12.51□□□□□ -0.41
CIRBP-239ENST00000592467 LINC01546A6NGU7 62 aa12.5□□□□□ -0.41
CIRBP-239ENST00000592467 TLX1NBP0CAT3 122 aa12.5□□□□□ -0.41
CIRBP-239ENST00000592467 RPL18AQ02543 176 aaKnown RBP12.5□□□□□ -0.41
CIRBP-239ENST00000592467 C9orf116Q5BN46 136 aaPredicted RBP12.5□□□□□ -0.41
CIRBP-239ENST00000592467 TOMM6Q96B49 74 aa12.5□□□□□ -0.41
CIRBP-239ENST00000592467 ALKBH7Q9BT30 221 aaPredicted RBP12.5□□□□□ -0.41
CIRBP-239ENST00000592467 VCX2Q9H322 139 aa12.5□□□□□ -0.41
CIRBP-239ENST00000592467 Q6ZRP5 223 aa12.49□□□□□ -0.41
CIRBP-239ENST00000592467 C2orf88Q9BSF0 95 aa12.49□□□□□ -0.41
CIRBP-239ENST00000592467 SRSF9Q13242 221 aaKnown RBP eCLIP12.48□□□□□ -0.41
CIRBP-239ENST00000592467 Q6ZN92 141 aa12.48□□□□□ -0.41
CIRBP-239ENST00000592467 TIMM17AQ99595 171 aa12.48□□□□□ -0.41
CIRBP-239ENST00000592467 S100PP25815 95 aa12.47□□□□□ -0.41
CIRBP-239ENST00000592467 RHEBQ15382 184 aa12.46□□□□□ -0.41
CIRBP-239ENST00000592467 SERTAD4-AS1Q5TG53 156 aa12.46□□□□□ -0.41
CIRBP-239ENST00000592467 C2orf82Q6UX34 121 aa12.46□□□□□ -0.41
CIRBP-239ENST00000592467 KRTAP7-1Q8IUC3 87 aa12.45□□□□□ -0.42
CIRBP-239ENST00000592467 FAM168BA1KXE4 195 aa12.44□□□□□ -0.42
CIRBP-239ENST00000592467 G0S2P27469 103 aa12.44□□□□□ -0.42
CIRBP-239ENST00000592467 COX19Q49B96 90 aa12.44□□□□□ -0.42
CIRBP-239ENST00000592467 PHF5AQ7RTV0 110 aaKnown RBP12.44□□□□□ -0.42
CIRBP-239ENST00000592467 ERASQ7Z444 233 aa12.44□□□□□ -0.42
CIRBP-239ENST00000592467 SPINK6Q6UWN8 80 aa12.43□□□□□ -0.42
CIRBP-239ENST00000592467 MRPL18Q9H0U6 180 aaKnown RBP12.43□□□□□ -0.42
CIRBP-239ENST00000592467 RPS10P5Q9NQ39 176 aa12.43□□□□□ -0.42
CIRBP-239ENST00000592467 TRBV30A0A0K0K1B3 111 aa12.42□□□□□ -0.42
CIRBP-239ENST00000592467 MT-ND6P03923 174 aa12.42□□□□□ -0.42
CIRBP-239ENST00000592467 LINC01600Q96MT4 127 aa12.42□□□□□ -0.42
CIRBP-239ENST00000592467 CDKN2A-AS1Q9UH64 79 aa12.42□□□□□ -0.42
CIRBP-239ENST00000592467 PSORS1C2Q9UIG4 136 aa12.42□□□□□ -0.42
CIRBP-239ENST00000592467 PAPPA-AS1Q5QFB9 102 aa12.41□□□□□ -0.42
CIRBP-239ENST00000592467 KRTAP11-1Q8IUC1 163 aa12.41□□□□□ -0.42
CIRBP-239ENST00000592467 HERVK_113P63121 156 aa12.4□□□□□ -0.42
CIRBP-239ENST00000592467 SCGB3A1Q96QR1 104 aa12.4□□□□□ -0.42
CIRBP-239ENST00000592467 SEC11AP67812 179 aa12.39□□□□□ -0.43
CIRBP-239ENST00000592467 FABP9Q0Z7S8 132 aa12.39□□□□□ -0.43
CIRBP-239ENST00000592467 GAGE2EQ4V326 116 aa12.39□□□□□ -0.43
CIRBP-239ENST00000592467 Q8IZM0 81 aa12.39□□□□□ -0.43
CIRBP-239ENST00000592467 GAGE2DQ9UEU5 116 aa12.39□□□□□ -0.43
CIRBP-239ENST00000592467 NDUFC2-KCTD14E9PQ53 114 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms