RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 Q6ZUT4 128 aa11.66□□□□□ -0.54
CCDC43-205ENST00000592333 C5orf38Q86SI9 138 aa11.65□□□□□ -0.54
CCDC43-205ENST00000592333 SMIM2Q9BVW6 85 aa11.65□□□□□ -0.54
CCDC43-205ENST00000592333 MRPL35Q9NZE8 188 aaKnown RBP11.65□□□□□ -0.54
CCDC43-205ENST00000592333 IGHV3OR16-9A0A0B4J2B5 98 aa11.64□□□□□ -0.55
CCDC43-205ENST00000592333 A0A1W2PNN7 141 aa11.64□□□□□ -0.55
CCDC43-205ENST00000592333 SPAG11BQ08648 103 aa11.64□□□□□ -0.55
CCDC43-205ENST00000592333 RNASE13Q5GAN3 156 aaKnown RBP11.64□□□□□ -0.55
CCDC43-205ENST00000592333 IMMP2LQ96T52 175 aa11.64□□□□□ -0.55
CCDC43-205ENST00000592333 HBBP68871 147 aa11.63□□□□□ -0.55
CCDC43-205ENST00000592333 C9orf116Q5BN46 136 aaPredicted RBP11.63□□□□□ -0.55
CCDC43-205ENST00000592333 FAM104AQ969W3 186 aa11.62□□□□□ -0.55
CCDC43-205ENST00000592333 A0A1B0GXF2 115 aa11.61□□□□□ -0.55
CCDC43-205ENST00000592333 C9JQL5 133 aa11.61□□□□□ -0.55
CCDC43-205ENST00000592333 D6R8Y8 96 aa11.61□□□□□ -0.55
CCDC43-205ENST00000592333 NDUFA1O15239 70 aa11.61□□□□□ -0.55
CCDC43-205ENST00000592333 TLX1NBP0CAT3 122 aa11.61□□□□□ -0.55
CCDC43-205ENST00000592333 RPL39P62891 51 aaKnown RBP11.61□□□□□ -0.55
CCDC43-205ENST00000592333 RPL18AQ02543 176 aaKnown RBP11.61□□□□□ -0.55
CCDC43-205ENST00000592333 LRP2P98164 4655 aa11.6□□□□□ -0.55
CCDC43-205ENST00000592333 ATP5L2Q7Z4Y8 100 aa11.6□□□□□ -0.55
CCDC43-205ENST00000592333 ORAOV1Q8WV07 137 aa11.6□□□□□ -0.55
CCDC43-205ENST00000592333 PSORS1C2Q9UIG4 136 aa11.6□□□□□ -0.55
CCDC43-205ENST00000592333 PYGO1Q9Y3Y4 419 aa11.6□□□□□ -0.55
CCDC43-205ENST00000592333 MT-ND6P03923 174 aa11.59□□□□□ -0.55
CCDC43-205ENST00000592333 LCE2CQ5TA81 110 aa11.59□□□□□ -0.55
CCDC43-205ENST00000592333 RAB5AP20339 215 aa11.58□□□□□ -0.56
CCDC43-205ENST00000592333 ORMDL3Q8N138 153 aa11.58□□□□□ -0.56
CCDC43-205ENST00000592333 OPRPNQ99935 248 aaPredicted RBP11.58□□□□□ -0.56
CCDC43-205ENST00000592333 IFITM10A6NMD0 228 aa11.57□□□□□ -0.56
CCDC43-205ENST00000592333 PRSS47A8MTI9 375 aa11.57□□□□□ -0.56
CCDC43-205ENST00000592333 NPYP01303 97 aa11.57□□□□□ -0.56
CCDC43-205ENST00000592333 IFI27P40305 119 aaPredicted RBP11.57□□□□□ -0.56
CCDC43-205ENST00000592333 MRPL54Q6P161 138 aaKnown RBP11.57□□□□□ -0.56
CCDC43-205ENST00000592333 LAMTOR2Q9Y2Q5 125 aa11.57□□□□□ -0.56
CCDC43-205ENST00000592333 A0A087WZ39 114 aa11.56□□□□□ -0.56
CCDC43-205ENST00000592333 TGIF2-C20orf24A0A0A6YYL0 155 aa11.56□□□□□ -0.56
CCDC43-205ENST00000592333 SRSF3P84103 164 aaKnown RBP11.56□□□□□ -0.56
CCDC43-205ENST00000592333 C4orf48Q5BLP8 95 aa11.56□□□□□ -0.56
CCDC43-205ENST00000592333 C1orf137Q5JT78 98 aa11.55□□□□□ -0.56
CCDC43-205ENST00000592333 TMEM136Q6ZRR5 245 aa11.55□□□□□ -0.56
CCDC43-205ENST00000592333 PHF5AQ7RTV0 110 aaKnown RBP11.54□□□□□ -0.56
CCDC43-205ENST00000592333 LINC01561Q8N1V8 128 aa11.54□□□□□ -0.56
CCDC43-205ENST00000592333 DIRC1Q969H9 104 aa11.54□□□□□ -0.56
CCDC43-205ENST00000592333 TRBV30A0A0K0K1B3 111 aa11.53□□□□□ -0.56
CCDC43-205ENST00000592333 PRELID3AQ96N28 172 aa11.53□□□□□ -0.56
CCDC43-205ENST00000592333 IGLV7-43P04211 117 aa11.52□□□□□ -0.57
CCDC43-205ENST00000592333 NPSP0C0P6 89 aa11.52□□□□□ -0.57
CCDC43-205ENST00000592333 KIAA0087Q14695 138 aa11.52□□□□□ -0.57
CCDC43-205ENST00000592333 UNQ6190/PRO20217Q6UXQ8 127 aa11.52□□□□□ -0.57
CCDC43-205ENST00000592333 TMEM141Q96I45 108 aa11.52□□□□□ -0.57
CCDC43-205ENST00000592333 C6orf48Q9UBA6 75 aa11.52□□□□□ -0.57
CCDC43-205ENST00000592333 LINC00242Q5T6M2 205 aa11.51□□□□□ -0.57
CCDC43-205ENST00000592333 C10orf25Q5T742 122 aa11.51□□□□□ -0.57
CCDC43-205ENST00000592333 IGLV4-3A0A075B6K6 122 aa11.5□□□□□ -0.57
CCDC43-205ENST00000592333 K7EMI3 77 aa11.5□□□□□ -0.57
CCDC43-205ENST00000592333 PNRC1Q12796 327 aaPredicted RBP11.5□□□□□ -0.57
CCDC43-205ENST00000592333 TEX43Q6ZNM6 134 aa11.5□□□□□ -0.57
CCDC43-205ENST00000592333 NDUFC2-KCTD14E9PQ53 114 aa11.48□□□□□ -0.57
CCDC43-205ENST00000592333 ODF1Q14990 250 aa11.48□□□□□ -0.57
CCDC43-205ENST00000592333 C2orf88Q9BSF0 95 aa11.48□□□□□ -0.57
CCDC43-205ENST00000592333 MAP1LC3AQ9H492 121 aa11.48□□□□□ -0.57
CCDC43-205ENST00000592333 H0Y9J4 135 aa11.47□□□□□ -0.57
CCDC43-205ENST00000592333 UBE2D1P51668 147 aa11.47□□□□□ -0.57
CCDC43-205ENST00000592333 Q6ZN92 141 aa11.47□□□□□ -0.57
CCDC43-205ENST00000592333 ANAPC16Q96DE5 110 aa11.47□□□□□ -0.57
CCDC43-205ENST00000592333 CYSLTR1Q9Y271 337 aa11.47□□□□□ -0.57
CCDC43-205ENST00000592333 RNF213Q63HN8 5207 aa11.47□□□□□ -0.57
CCDC43-205ENST00000592333 A0A1B0GVG6 124 aa11.46□□□□□ -0.57
CCDC43-205ENST00000592333 FAM168BA1KXE4 195 aa11.46□□□□□ -0.57
CCDC43-205ENST00000592333 GAGE2EQ4V326 116 aa11.46□□□□□ -0.57
CCDC43-205ENST00000592333 ORMDL2Q53FV1 153 aa11.46□□□□□ -0.57
CCDC43-205ENST00000592333 Q8N8P6 123 aa11.46□□□□□ -0.57
CCDC43-205ENST00000592333 PACRGQ96M98 296 aaPredicted RBP11.46□□□□□ -0.57
CCDC43-205ENST00000592333 GAGE2DQ9UEU5 116 aa11.46□□□□□ -0.57
CCDC43-205ENST00000592333 MT-ND4LP03901 98 aa11.45□□□□□ -0.58
CCDC43-205ENST00000592333 G0S2P27469 103 aa11.45□□□□□ -0.58
CCDC43-205ENST00000592333 FAM19A3Q7Z5A8 133 aa11.45□□□□□ -0.58
CCDC43-205ENST00000592333 AMELXQ99217 191 aa11.45□□□□□ -0.58
CCDC43-205ENST00000592333 IGLV1-50A0A075B6I6 118 aa11.44□□□□□ -0.58
CCDC43-205ENST00000592333 C2orf66Q6UXQ4 117 aa11.44□□□□□ -0.58
CCDC43-205ENST00000592333 FAM19A5Q7Z5A7 132 aaPredicted RBP11.44□□□□□ -0.58
CCDC43-205ENST00000592333 VCX2Q9H322 139 aa11.44□□□□□ -0.58
CCDC43-205ENST00000592333 M0QXV9 152 aa11.43□□□□□ -0.58
CCDC43-205ENST00000592333 SEC11AP67812 179 aa11.43□□□□□ -0.58
CCDC43-205ENST00000592333 PAPPA-AS1Q5QFB9 102 aa11.43□□□□□ -0.58
CCDC43-205ENST00000592333 LOC389332A0A1B0GUA5 103 aa11.42□□□□□ -0.58
CCDC43-205ENST00000592333 KRTAP7-1Q8IUC3 87 aa11.42□□□□□ -0.58
CCDC43-205ENST00000592333 NXT2Q9NPJ8 142 aaKnown RBP11.42□□□□□ -0.58
CCDC43-205ENST00000592333 IGIPA6NJ69 53 aa11.41□□□□□ -0.58
CCDC43-205ENST00000592333 PRSS2P07478 247 aa11.41□□□□□ -0.58
CCDC43-205ENST00000592333 UBE2BP63146 152 aa11.41□□□□□ -0.58
CCDC43-205ENST00000592333 C2orf82Q6UX34 121 aa11.41□□□□□ -0.58
CCDC43-205ENST00000592333 KRTAP11-1Q8IUC1 163 aa11.41□□□□□ -0.58
CCDC43-205ENST00000592333 Q8IZM0 81 aa11.41□□□□□ -0.58
CCDC43-205ENST00000592333 LINC00173Q6ZV60 143 aa11.4□□□□□ -0.58
CCDC43-205ENST00000592333 PRR26Q8N8Z3 221 aa11.4□□□□□ -0.58
CCDC43-205ENST00000592333 CKS1BP61024 79 aa11.39□□□□□ -0.59
CCDC43-205ENST00000592333 HERVK_113P63121 156 aa11.39□□□□□ -0.59
CCDC43-205ENST00000592333 C6orf226Q5I0X4 101 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms