RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 IFI27P40305 119 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-226ENST00000591534 POLR2KP53803 58 aaKnown RBP6.26□□□□□ -1.41
BRCA1-226ENST00000591534 SERTAD4-AS1Q5TG53 156 aa6.26□□□□□ -1.41
BRCA1-226ENST00000591534 Q8N976 141 aa6.26□□□□□ -1.41
BRCA1-226ENST00000591534 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-226ENST00000591534 UBE2L6O14933 153 aa6.25□□□□□ -1.41
BRCA1-226ENST00000591534 Q6ZN92 141 aa6.25□□□□□ -1.41
BRCA1-226ENST00000591534 HIST3H2BBQ8N257 126 aa6.25□□□□□ -1.41
BRCA1-226ENST00000591534 TMEM141Q96I45 108 aa6.25□□□□□ -1.41
BRCA1-226ENST00000591534 TRBV25-1A0A075B6N4 114 aa6.24□□□□□ -1.41
BRCA1-226ENST00000591534 TRAV26-2A0A0B4J265 109 aa6.24□□□□□ -1.41
BRCA1-226ENST00000591534 ZNF25P17030 456 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-226ENST00000591534 IQCJQ1A5X6 159 aa6.24□□□□□ -1.41
BRCA1-226ENST00000591534 Q6ZSA8 131 aa6.24□□□□□ -1.41
BRCA1-226ENST00000591534 JPT2Q9H910 190 aa6.24□□□□□ -1.41
BRCA1-226ENST00000591534 SPANXA1Q9NS26 97 aa6.24□□□□□ -1.41
BRCA1-226ENST00000591534 FLG2Q5D862 2391 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-226ENST00000591534 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-226ENST00000591534 IGHV1-24A0A0C4DH33 117 aa6.23□□□□□ -1.41
BRCA1-226ENST00000591534 GAGE12JA6NER3 117 aa6.23□□□□□ -1.41
BRCA1-226ENST00000591534 SMKR1H3BMG3 65 aa6.23□□□□□ -1.41
BRCA1-226ENST00000591534 FABP4P15090 132 aa6.23□□□□□ -1.41
BRCA1-226ENST00000591534 SEC11AP67812 179 aa6.23□□□□□ -1.41
BRCA1-226ENST00000591534 S100A12P80511 92 aa6.23□□□□□ -1.41
BRCA1-226ENST00000591534 GAGE1Q13065 139 aa6.23□□□□□ -1.41
BRCA1-226ENST00000591534 GAGE4Q13068 117 aa6.23□□□□□ -1.41
BRCA1-226ENST00000591534 GAGE5Q13069 117 aa6.23□□□□□ -1.41
BRCA1-226ENST00000591534 PMCHL1Q16048 86 aa6.23□□□□□ -1.41
BRCA1-226ENST00000591534 ERASQ7Z444 233 aa6.23□□□□□ -1.41
BRCA1-226ENST00000591534 NEXN-AS1Q8NBZ9 246 aa6.23□□□□□ -1.41
BRCA1-226ENST00000591534 TMEM101Q96IK0 257 aa6.23□□□□□ -1.41
BRCA1-226ENST00000591534 TIMM17AQ99595 171 aa6.23□□□□□ -1.41
BRCA1-226ENST00000591534 TIMM21Q9BVV7 248 aa6.23□□□□□ -1.41
BRCA1-226ENST00000591534 Q9UF83 564 aa6.23□□□□□ -1.41
BRCA1-226ENST00000591534 CSDC2Q9Y534 153 aaKnown RBP6.23□□□□□ -1.41
BRCA1-226ENST00000591534 A0A087WX48 190 aa6.22□□□□□ -1.41
BRCA1-226ENST00000591534 A0A0A0MQY5 61 aa6.22□□□□□ -1.41
BRCA1-226ENST00000591534 SMIM6P0DI80 62 aa6.22□□□□□ -1.41
BRCA1-226ENST00000591534 UBE2D3P61077 147 aa6.22□□□□□ -1.41
BRCA1-226ENST00000591534 UBE2D2P62837 147 aa6.22□□□□□ -1.41
BRCA1-226ENST00000591534 C14orf177Q52M58 125 aa6.22□□□□□ -1.41
BRCA1-226ENST00000591534 PET117Q6UWS5 81 aa6.22□□□□□ -1.41
BRCA1-226ENST00000591534 TOMM6Q96B49 74 aa6.22□□□□□ -1.41
BRCA1-226ENST00000591534 RPL39LQ96EH5 51 aaKnown RBP6.22□□□□□ -1.41
BRCA1-226ENST00000591534 SCGB3A1Q96QR1 104 aa6.22□□□□□ -1.41
BRCA1-226ENST00000591534 HIST1H2BLQ99880 126 aa6.22□□□□□ -1.41
BRCA1-226ENST00000591534 CHCHD7Q9BUK0 85 aa6.22□□□□□ -1.41
BRCA1-226ENST00000591534 PYGO1Q9Y3Y4 419 aa6.22□□□□□ -1.41
BRCA1-226ENST00000591534 IGKV2D-24A0A075B6R9 120 aa6.21□□□□□ -1.42
BRCA1-226ENST00000591534 HSBP1L1C9JCN9 74 aa6.21□□□□□ -1.42
BRCA1-226ENST00000591534 LECT2O14960 151 aa6.21□□□□□ -1.42
BRCA1-226ENST00000591534 CCL25O15444 150 aa6.21□□□□□ -1.42
BRCA1-226ENST00000591534 OXTP01178 125 aa6.21□□□□□ -1.42
BRCA1-226ENST00000591534 C2orf66Q6UXQ4 117 aa6.21□□□□□ -1.42
BRCA1-226ENST00000591534 BAALCQ8WXS3 180 aa6.21□□□□□ -1.42
BRCA1-226ENST00000591534 IFI27L1Q96BM0 104 aa6.21□□□□□ -1.42
BRCA1-226ENST00000591534 C2orf88Q9BSF0 95 aa6.21□□□□□ -1.42
BRCA1-226ENST00000591534 TMEM243Q9BU79 118 aa6.21□□□□□ -1.42
BRCA1-226ENST00000591534 CHAC1Q9BUX1 264 aa6.21□□□□□ -1.42
BRCA1-226ENST00000591534 PRSS1P07477 247 aa6.2□□□□□ -1.42
BRCA1-226ENST00000591534 PLNP26678 52 aa6.2□□□□□ -1.42
BRCA1-226ENST00000591534 AMMECR1LQ6DCA0 310 aa6.2□□□□□ -1.42
BRCA1-226ENST00000591534 C20orf203Q8NBC4 194 aa6.2□□□□□ -1.42
BRCA1-226ENST00000591534 TRBV6-8A0A0A6YYG3 113 aa6.19□□□□□ -1.42
BRCA1-226ENST00000591534 TRAV12-1A0A0B4J245 112 aa6.19□□□□□ -1.42
BRCA1-226ENST00000591534 GAGE10A6NGK3 116 aa6.19□□□□□ -1.42
BRCA1-226ENST00000591534 SLPIP03973 132 aa6.19□□□□□ -1.42
BRCA1-226ENST00000591534 LINC00694P0DN24 101 aa6.19□□□□□ -1.42
BRCA1-226ENST00000591534 MRPS36P82909 103 aaKnown RBP6.19□□□□□ -1.42
BRCA1-226ENST00000591534 WFDC2Q14508 124 aa6.19□□□□□ -1.42
BRCA1-226ENST00000591534 PDZD11Q5EBL8 140 aa6.19□□□□□ -1.42
BRCA1-226ENST00000591534 CFAP161Q6P656 301 aa6.19□□□□□ -1.42
BRCA1-226ENST00000591534 SCXQ7RTU7 201 aa6.19□□□□□ -1.42
BRCA1-226ENST00000591534 MRPL52Q86TS9 123 aaKnown RBP6.19□□□□□ -1.42
BRCA1-226ENST00000591534 OR10D4PQ8NGN7 298 aa6.19□□□□□ -1.42
BRCA1-226ENST00000591534 VCX2Q9H322 139 aa6.19□□□□□ -1.42
BRCA1-226ENST00000591534 KLK12Q9UKR0 248 aa6.19□□□□□ -1.42
BRCA1-226ENST00000591534 SCGB1D1O95968 90 aa6.18□□□□□ -1.42
BRCA1-226ENST00000591534 TSHBP01222 138 aa6.18□□□□□ -1.42
BRCA1-226ENST00000591534 CRPP02741 224 aa6.18□□□□□ -1.42
BRCA1-226ENST00000591534 KRTDAPP60985 99 aa6.18□□□□□ -1.42
BRCA1-226ENST00000591534 JOSD1Q15040 202 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-226ENST00000591534 FAM19A2Q8N3H0 131 aa6.18□□□□□ -1.42
BRCA1-226ENST00000591534 OR5A1Q8NGJ0 315 aa6.18□□□□□ -1.42
BRCA1-226ENST00000591534 UBE2WQ96B02 151 aa6.18□□□□□ -1.42
BRCA1-226ENST00000591534 A0A1B0GUV1 79 aa6.17□□□□□ -1.42
BRCA1-226ENST00000591534 TMEM262E9PQX1 116 aa6.17□□□□□ -1.42
BRCA1-226ENST00000591534 SYS1-DBNDD2H3BUS1 97 aa6.17□□□□□ -1.42
BRCA1-226ENST00000591534 PMVKQ15126 192 aa6.17□□□□□ -1.42
BRCA1-226ENST00000591534 TEX43Q6ZNM6 134 aa6.17□□□□□ -1.42
BRCA1-226ENST00000591534 CHCHD5Q9BSY4 110 aa6.17□□□□□ -1.42
BRCA1-226ENST00000591534 LOC105371267A0A1B0GV96 52 aa6.16□□□□□ -1.42
BRCA1-226ENST00000591534 CIRBP-AS1Q8TBR5 109 aa6.16□□□□□ -1.42
BRCA1-226ENST00000591534 IGIPA6NJ69 53 aa6.15□□□□□ -1.42
BRCA1-226ENST00000591534 HERVK_113P61574 105 aa6.15□□□□□ -1.42
BRCA1-226ENST00000591534 LINC01620Q4KN68 170 aa6.15□□□□□ -1.42
BRCA1-226ENST00000591534 URB1-AS1Q96HZ7 61 aa6.15□□□□□ -1.42
BRCA1-226ENST00000591534 F8VRH5 84 aa6.14□□□□□ -1.43
BRCA1-226ENST00000591534 H3BRM9 83 aa6.14□□□□□ -1.43
BRCA1-226ENST00000591534 NUPR1O60356 82 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 235.1 ms