RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 IGLV4-3A0A075B6K6 122 aa7.7□□□□□ -1.18
LIG3-213ENST00000590630 IFITM10A6NMD0 228 aa7.7□□□□□ -1.18
LIG3-213ENST00000590630 COX7A2LO14548 114 aa7.7□□□□□ -1.18
LIG3-213ENST00000590630 LINC01546A6NGU7 62 aa7.69□□□□□ -1.18
LIG3-213ENST00000590630 LINC01549A6NIU2 74 aa7.69□□□□□ -1.18
LIG3-213ENST00000590630 MALP21145 153 aa7.69□□□□□ -1.18
LIG3-213ENST00000590630 S100A2P29034 98 aa7.69□□□□□ -1.18
LIG3-213ENST00000590630 HIGD2BQ4VC39 106 aa7.69□□□□□ -1.18
LIG3-213ENST00000590630 Q6ZN92 141 aa7.69□□□□□ -1.18
LIG3-213ENST00000590630 TEX43Q6ZNM6 134 aa7.69□□□□□ -1.18
LIG3-213ENST00000590630 YPEL4Q96NS1 127 aa7.69□□□□□ -1.18
LIG3-213ENST00000590630 IGIPA6NJ69 53 aa7.68□□□□□ -1.18
LIG3-213ENST00000590630 SLPIP03973 132 aa7.68□□□□□ -1.18
LIG3-213ENST00000590630 PAPPA-AS1Q5QFB9 102 aa7.68□□□□□ -1.18
LIG3-213ENST00000590630 TOMM6Q96B49 74 aa7.68□□□□□ -1.18
LIG3-213ENST00000590630 TIMM17AQ99595 171 aa7.68□□□□□ -1.18
LIG3-213ENST00000590630 C2orf88Q9BSF0 95 aa7.68□□□□□ -1.18
LIG3-213ENST00000590630 DNAH8Q96JB1 4490 aa7.68□□□□□ -1.18
LIG3-213ENST00000590630 IGHV3-64A0A075B6Q5 118 aa7.67□□□□□ -1.18
LIG3-213ENST00000590630 IGHV3OR16-9A0A0B4J2B5 98 aa7.67□□□□□ -1.18
LIG3-213ENST00000590630 APOMO95445 188 aa7.67□□□□□ -1.18
LIG3-213ENST00000590630 HAMPP81172 84 aa7.67□□□□□ -1.18
LIG3-213ENST00000590630 SDIM1Q6ZPB5 146 aa7.67□□□□□ -1.18
LIG3-213ENST00000590630 FA2HQ7L5A8 372 aa7.67□□□□□ -1.18
LIG3-213ENST00000590630 AMELXQ99217 191 aa7.67□□□□□ -1.18
LIG3-213ENST00000590630 CHAC1Q9BUX1 264 aa7.67□□□□□ -1.18
LIG3-213ENST00000590630 KRTAP17-1Q9BYP8 105 aa7.67□□□□□ -1.18
LIG3-213ENST00000590630 VCX2Q9H322 139 aa7.67□□□□□ -1.18
LIG3-213ENST00000590630 SRRM2Q9UQ35 2752 aaKnown RBP7.67□□□□□ -1.18
LIG3-213ENST00000590630 ZNF561-AS1K7EIQ3 104 aa7.66□□□□□ -1.18
LIG3-213ENST00000590630 SCXQ7RTU7 201 aa7.66□□□□□ -1.18
LIG3-213ENST00000590630 ERASQ7Z444 233 aa7.66□□□□□ -1.18
LIG3-213ENST00000590630 C5orf38Q86SI9 138 aa7.66□□□□□ -1.18
LIG3-213ENST00000590630 C18orf32Q8TCD1 76 aa7.66□□□□□ -1.18
LIG3-213ENST00000590630 EPM2AB3EWF7 344 aa7.65□□□□□ -1.18
LIG3-213ENST00000590630 UBE2D1P51668 147 aa7.65□□□□□ -1.18
LIG3-213ENST00000590630 LINC00242Q5T6M2 205 aa7.65□□□□□ -1.18
LIG3-213ENST00000590630 LINC00173Q6ZV60 143 aa7.65□□□□□ -1.18
LIG3-213ENST00000590630 SCGB3A1Q96QR1 104 aa7.65□□□□□ -1.18
LIG3-213ENST00000590630 SMR3BP02814 79 aaPredicted RBP7.64□□□□□ -1.19
LIG3-213ENST00000590630 OR10D4PQ8NGN7 298 aa7.64□□□□□ -1.19
LIG3-213ENST00000590630 KRTAP4-5Q9BYR2 181 aa7.64□□□□□ -1.19
LIG3-213ENST00000590630 PKIGQ9Y2B9 76 aa7.64□□□□□ -1.19
LIG3-213ENST00000590630 ABCA13Q86UQ4 5058 aa7.64□□□□□ -1.19
LIG3-213ENST00000590630 IGLV4-69A0A075B6H9 119 aa7.63□□□□□ -1.19
LIG3-213ENST00000590630 A0A087WZ39 114 aa7.63□□□□□ -1.19
LIG3-213ENST00000590630 TSTD3H0UI37 97 aa7.63□□□□□ -1.19
LIG3-213ENST00000590630 FAM229AH3BQW9 127 aa7.63□□□□□ -1.19
LIG3-213ENST00000590630 LINC00614P0C842 121 aa7.63□□□□□ -1.19
LIG3-213ENST00000590630 SEC11AP67812 179 aa7.63□□□□□ -1.19
LIG3-213ENST00000590630 SYCNQ0VAF6 134 aa7.63□□□□□ -1.19
LIG3-213ENST00000590630 CIRBPQ14011 172 aaKnown RBP7.63□□□□□ -1.19
LIG3-213ENST00000590630 Q5VSD8 79 aa7.63□□□□□ -1.19
LIG3-213ENST00000590630 FAM19A3Q7Z5A8 133 aa7.63□□□□□ -1.19
LIG3-213ENST00000590630 CIRBP-AS1Q8TBR5 109 aa7.63□□□□□ -1.19
LIG3-213ENST00000590630 LINC00526Q96FQ7 95 aa7.63□□□□□ -1.19
LIG3-213ENST00000590630 CARD19Q96LW7 228 aa7.63□□□□□ -1.19
LIG3-213ENST00000590630 FAT1Q14517 4588 aa7.62□□□□□ -1.19
LIG3-213ENST00000590630 COX6A2Q02221 97 aa7.62□□□□□ -1.19
LIG3-213ENST00000590630 SPAG11BQ08648 103 aa7.62□□□□□ -1.19
LIG3-213ENST00000590630 PYY3Q5JQD4 70 aa7.62□□□□□ -1.19
LIG3-213ENST00000590630 ZC2HC1BQ5TFG8 222 aa7.62□□□□□ -1.19
LIG3-213ENST00000590630 C2orf48Q96LS8 159 aa7.62□□□□□ -1.19
LIG3-213ENST00000590630 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.62□□□□□ -1.19
LIG3-213ENST00000590630 F8WDY8 70 aa7.61□□□□□ -1.19
LIG3-213ENST00000590630 HERVK_113P63121 156 aa7.61□□□□□ -1.19
LIG3-213ENST00000590630 LINC01561Q8N1V8 128 aa7.61□□□□□ -1.19
LIG3-213ENST00000590630 ORAOV1Q8WV07 137 aa7.61□□□□□ -1.19
LIG3-213ENST00000590630 URB1-AS1Q96HZ7 61 aa7.61□□□□□ -1.19
LIG3-213ENST00000590630 C14orf144Q96I85 54 aa7.61□□□□□ -1.19
LIG3-213ENST00000590630 CAMK2N2Q96S95 79 aa7.61□□□□□ -1.19
LIG3-213ENST00000590630 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.6□□□□□ -1.19
LIG3-213ENST00000590630 PANO1I0J062 215 aa7.6□□□□□ -1.19
LIG3-213ENST00000590630 HBDP02042 147 aa7.6□□□□□ -1.19
LIG3-213ENST00000590630 DDTP30046 118 aa7.6□□□□□ -1.19
LIG3-213ENST00000590630 NDUFA6P56556 154 aa7.6□□□□□ -1.19
LIG3-213ENST00000590630 LINC00528Q8N1L1 170 aa7.6□□□□□ -1.19
LIG3-213ENST00000590630 SPACA4Q8TDM5 124 aa7.6□□□□□ -1.19
LIG3-213ENST00000590630 VPS13BQ7Z7G8 4022 aa7.6□□□□□ -1.19
LIG3-213ENST00000590630 A0A096LNJ9 63 aa7.59□□□□□ -1.19
LIG3-213ENST00000590630 Q6ZRU5 148 aa7.59□□□□□ -1.19
LIG3-213ENST00000590630 HIST3H2BBQ8N257 126 aa7.59□□□□□ -1.19
LIG3-213ENST00000590630 GEMIN7Q9H840 131 aaKnown RBP7.59□□□□□ -1.19
LIG3-213ENST00000590630 LINC00474Q9P2X8 69 aa7.59□□□□□ -1.19
LIG3-213ENST00000590630 NDUFA1O15239 70 aa7.58□□□□□ -1.2
LIG3-213ENST00000590630 TRGC2P03986 189 aa7.58□□□□□ -1.2
LIG3-213ENST00000590630 PLA2G1BP04054 148 aaKnown RBP7.58□□□□□ -1.2
LIG3-213ENST00000590630 CHTF8P0CG12 524 aa7.58□□□□□ -1.2
LIG3-213ENST00000590630 PMVKQ15126 192 aa7.58□□□□□ -1.2
LIG3-213ENST00000590630 RNF151Q2KHN1 245 aa7.58□□□□□ -1.2
LIG3-213ENST00000590630 CHCHD1Q96BP2 118 aaKnown RBP7.58□□□□□ -1.2
LIG3-213ENST00000590630 DPH3Q96FX2 82 aa7.58□□□□□ -1.2
LIG3-213ENST00000590630 CST9LQ9H4G1 147 aa7.58□□□□□ -1.2
LIG3-213ENST00000590630 IGKV2-24A0A0C4DH68 120 aa7.57□□□□□ -1.2
LIG3-213ENST00000590630 A0A0J9YXV3 536 aa7.57□□□□□ -1.2
LIG3-213ENST00000590630 LOC107984640A0A0U1RRK4 108 aa7.57□□□□□ -1.2
LIG3-213ENST00000590630 TINCRA0A1B0GVN0 87 aa7.57□□□□□ -1.2
LIG3-213ENST00000590630 PMCHL1Q16048 86 aa7.57□□□□□ -1.2
LIG3-213ENST00000590630 PDZD11Q5EBL8 140 aa7.57□□□□□ -1.2
LIG3-213ENST00000590630 MRPL35Q9NZE8 188 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms