RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 PLA2G1BP04054 148 aaKnown RBP11.54□□□□□ -0.56
DDX39A-212ENST00000590260 S100PP25815 95 aa11.54□□□□□ -0.56
DDX39A-212ENST00000590260 ALKBH7Q9BT30 221 aaPredicted RBP11.54□□□□□ -0.56
DDX39A-212ENST00000590260 Q6ZRU5 148 aa11.53□□□□□ -0.56
DDX39A-212ENST00000590260 CARD19Q96LW7 228 aa11.53□□□□□ -0.56
DDX39A-212ENST00000590260 NXT2Q9NPJ8 142 aaKnown RBP11.53□□□□□ -0.56
DDX39A-212ENST00000590260 CYSLTR1Q9Y271 337 aa11.53□□□□□ -0.56
DDX39A-212ENST00000590260 TGIF2-C20orf24A0A0A6YYL0 155 aa11.52□□□□□ -0.57
DDX39A-212ENST00000590260 MALP21145 153 aa11.52□□□□□ -0.57
DDX39A-212ENST00000590260 HNRNPA3P51991 378 aaKnown RBP11.52□□□□□ -0.57
DDX39A-212ENST00000590260 SYCNQ0VAF6 134 aa11.52□□□□□ -0.57
DDX39A-212ENST00000590260 ORMDL2Q53FV1 153 aa11.52□□□□□ -0.57
DDX39A-212ENST00000590260 LINC00242Q5T6M2 205 aa11.52□□□□□ -0.57
DDX39A-212ENST00000590260 TMEM141Q96I45 108 aa11.52□□□□□ -0.57
DDX39A-212ENST00000590260 AMELXQ99217 191 aa11.52□□□□□ -0.57
DDX39A-212ENST00000590260 PLAC8Q9NZF1 115 aa11.52□□□□□ -0.57
DDX39A-212ENST00000590260 FLG2Q5D862 2391 aaPredicted RBP11.52□□□□□ -0.57
DDX39A-212ENST00000590260 LINC01546A6NGU7 62 aa11.51□□□□□ -0.57
DDX39A-212ENST00000590260 ZNF561-AS1K7EIQ3 104 aa11.51□□□□□ -0.57
DDX39A-212ENST00000590260 K7EMI3 77 aa11.51□□□□□ -0.57
DDX39A-212ENST00000590260 APOC3P02656 99 aa11.51□□□□□ -0.57
DDX39A-212ENST00000590260 MRPL18Q9H0U6 180 aaKnown RBP11.51□□□□□ -0.57
DDX39A-212ENST00000590260 HERC1Q15751 4861 aa11.5□□□□□ -0.57
DDX39A-212ENST00000590260 FAT3Q8TDW7 4589 aa11.5□□□□□ -0.57
DDX39A-212ENST00000590260 IGKV2-24A0A0C4DH68 120 aa11.5□□□□□ -0.57
DDX39A-212ENST00000590260 UBE2D1P51668 147 aa11.5□□□□□ -0.57
DDX39A-212ENST00000590260 LRP1Q07954 4544 aaKnown RBP11.5□□□□□ -0.57
DDX39A-212ENST00000590260 C2orf48Q96LS8 159 aa11.49□□□□□ -0.57
DDX39A-212ENST00000590260 YPEL4Q96NS1 127 aa11.49□□□□□ -0.57
DDX39A-212ENST00000590260 SPAG11BQ08648 103 aa11.48□□□□□ -0.57
DDX39A-212ENST00000590260 MAJINQ3KP22 176 aa11.48□□□□□ -0.57
DDX39A-212ENST00000590260 TOMM6Q96B49 74 aa11.48□□□□□ -0.57
DDX39A-212ENST00000590260 A0A087WZ39 114 aa11.47□□□□□ -0.57
DDX39A-212ENST00000590260 MT-ND6P03923 174 aa11.47□□□□□ -0.57
DDX39A-212ENST00000590260 RPL37AP61513 92 aaKnown RBP11.47□□□□□ -0.57
DDX39A-212ENST00000590260 KIAA0087Q14695 138 aa11.47□□□□□ -0.57
DDX39A-212ENST00000590260 COX19Q49B96 90 aa11.47□□□□□ -0.57
DDX39A-212ENST00000590260 TEX43Q6ZNM6 134 aa11.47□□□□□ -0.57
DDX39A-212ENST00000590260 FAM19A3Q7Z5A8 133 aa11.47□□□□□ -0.57
DDX39A-212ENST00000590260 OR10D4PQ8NGN7 298 aa11.47□□□□□ -0.57
DDX39A-212ENST00000590260 ORAOV1Q8WV07 137 aa11.47□□□□□ -0.57
DDX39A-212ENST00000590260 URB1-AS1Q96HZ7 61 aa11.47□□□□□ -0.57
DDX39A-212ENST00000590260 A0A0J9YXV3 536 aa11.46□□□□□ -0.57
DDX39A-212ENST00000590260 FABP9Q0Z7S8 132 aa11.46□□□□□ -0.57
DDX39A-212ENST00000590260 C10orf25Q5T742 122 aa11.46□□□□□ -0.57
DDX39A-212ENST00000590260 CAMK2N2Q96S95 79 aa11.46□□□□□ -0.57
DDX39A-212ENST00000590260 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.45□□□□□ -0.58
DDX39A-212ENST00000590260 APOMO95445 188 aa11.45□□□□□ -0.58
DDX39A-212ENST00000590260 NPSP0C0P6 89 aa11.45□□□□□ -0.58
DDX39A-212ENST00000590260 SVBPQ8N300 66 aa11.45□□□□□ -0.58
DDX39A-212ENST00000590260 STPG4Q8N801 248 aa11.45□□□□□ -0.58
DDX39A-212ENST00000590260 TIMM17AQ99595 171 aa11.45□□□□□ -0.58
DDX39A-212ENST00000590260 SNAPINO95295 136 aa11.44□□□□□ -0.58
DDX39A-212ENST00000590260 DPH3Q96FX2 82 aa11.44□□□□□ -0.58
DDX39A-212ENST00000590260 A0A096LNJ9 63 aa11.43□□□□□ -0.58
DDX39A-212ENST00000590260 PTTG1IPP53801 180 aa11.43□□□□□ -0.58
DDX39A-212ENST00000590260 VCX2Q9H322 139 aa11.43□□□□□ -0.58
DDX39A-212ENST00000590260 UNQ6190/PRO20217Q6UXQ8 127 aa11.42□□□□□ -0.58
DDX39A-212ENST00000590260 ERASQ7Z444 233 aa11.42□□□□□ -0.58
DDX39A-212ENST00000590260 LOC107984640A0A0U1RRK4 108 aa11.41□□□□□ -0.58
DDX39A-212ENST00000590260 Q6ZN92 141 aa11.41□□□□□ -0.58
DDX39A-212ENST00000590260 C18orf32Q8TCD1 76 aa11.41□□□□□ -0.58
DDX39A-212ENST00000590260 C2orf88Q9BSF0 95 aa11.41□□□□□ -0.58
DDX39A-212ENST00000590260 MRPL35Q9NZE8 188 aaKnown RBP11.41□□□□□ -0.58
DDX39A-212ENST00000590260 C6orf48Q9UBA6 75 aa11.41□□□□□ -0.58
DDX39A-212ENST00000590260 TRAPPC1Q9Y5R8 145 aa11.41□□□□□ -0.58
DDX39A-212ENST00000590260 A0A1W2PNN7 141 aa11.4□□□□□ -0.58
DDX39A-212ENST00000590260 GAGE2BQ13066 116 aa11.4□□□□□ -0.58
DDX39A-212ENST00000590260 NDUFA5Q16718 116 aa11.4□□□□□ -0.58
DDX39A-212ENST00000590260 RNF151Q2KHN1 245 aa11.4□□□□□ -0.58
DDX39A-212ENST00000590260 LINC01561Q8N1V8 128 aa11.4□□□□□ -0.58
DDX39A-212ENST00000590260 SCGB3A1Q96QR1 104 aa11.4□□□□□ -0.58
DDX39A-212ENST00000590260 KRTAP29-1A8MX34 341 aaPredicted RBP11.39□□□□□ -0.59
DDX39A-212ENST00000590260 SLC7A5P1Q8MH63 180 aa11.39□□□□□ -0.59
DDX39A-212ENST00000590260 F8WDY8 70 aa11.38□□□□□ -0.59
DDX39A-212ENST00000590260 C2orf82Q6UX34 121 aa11.38□□□□□ -0.59
DDX39A-212ENST00000590260 LINC00474Q9P2X8 69 aa11.38□□□□□ -0.59
DDX39A-212ENST00000590260 CDKN2A-AS1Q9UH64 79 aa11.38□□□□□ -0.59
DDX39A-212ENST00000590260 NDUFA1O15239 70 aa11.37□□□□□ -0.59
DDX39A-212ENST00000590260 G0S2P27469 103 aa11.37□□□□□ -0.59
DDX39A-212ENST00000590260 FA2HQ7L5A8 372 aa11.37□□□□□ -0.59
DDX39A-212ENST00000590260 RPL18AQ02543 176 aaKnown RBP11.36□□□□□ -0.59
DDX39A-212ENST00000590260 Q6ZRP5 223 aa11.36□□□□□ -0.59
DDX39A-212ENST00000590260 CBLN2Q8IUK8 224 aa11.36□□□□□ -0.59
DDX39A-212ENST00000590260 PKIGQ9Y2B9 76 aa11.36□□□□□ -0.59
DDX39A-212ENST00000590260 TLX1NBP0CAT3 122 aa11.35□□□□□ -0.59
DDX39A-212ENST00000590260 CST9LQ9H4G1 147 aa11.35□□□□□ -0.59
DDX39A-212ENST00000590260 DMBT1Q9UGM3 2413 aaPredicted RBP11.35□□□□□ -0.59
DDX39A-212ENST00000590260 HERVK_113P63121 156 aa11.34□□□□□ -0.59
DDX39A-212ENST00000590260 PMCHL1Q16048 86 aa11.34□□□□□ -0.59
DDX39A-212ENST00000590260 PAPPA-AS1Q5QFB9 102 aa11.34□□□□□ -0.59
DDX39A-212ENST00000590260 KRTAP7-1Q8IUC3 87 aa11.34□□□□□ -0.59
DDX39A-212ENST00000590260 SMCO4Q9NRQ5 59 aa11.34□□□□□ -0.59
DDX39A-212ENST00000590260 IGLV5-45A0A087WSX0 123 aa11.33□□□□□ -0.6
DDX39A-212ENST00000590260 LINC00614P0C842 121 aa11.33□□□□□ -0.6
DDX39A-212ENST00000590260 PRR3P79522 188 aaKnown RBP11.33□□□□□ -0.6
DDX39A-212ENST00000590260 C9orf116Q5BN46 136 aaPredicted RBP11.33□□□□□ -0.6
DDX39A-212ENST00000590260 PDZD11Q5EBL8 140 aa11.32□□□□□ -0.6
DDX39A-212ENST00000590260 C7orf33Q8WU49 177 aa11.32□□□□□ -0.6
DDX39A-212ENST00000590260 TINCRA0A1B0GVN0 87 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms