RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 POLR2KP53803 58 aaKnown RBP7.32□□□□□ -1.24
NEDD4L-227ENST00000590020 LINC00242Q5T6M2 205 aa7.32□□□□□ -1.24
NEDD4L-227ENST00000590020 GNG13Q9P2W3 67 aa7.32□□□□□ -1.24
NEDD4L-227ENST00000590020 F8WDY8 70 aa7.3□□□□□ -1.24
NEDD4L-227ENST00000590020 ARPC5O15511 151 aa7.3□□□□□ -1.24
NEDD4L-227ENST00000590020 NUPR1O60356 82 aa7.3□□□□□ -1.24
NEDD4L-227ENST00000590020 GIPP09681 153 aaPredicted RBP7.3□□□□□ -1.24
NEDD4L-227ENST00000590020 FCER1GP30273 86 aa7.3□□□□□ -1.24
NEDD4L-227ENST00000590020 C2orf82Q6UX34 121 aa7.3□□□□□ -1.24
NEDD4L-227ENST00000590020 C22orf24Q9Y442 160 aa7.3□□□□□ -1.24
NEDD4L-227ENST00000590020 TRBV27A0A0K0K1C4 114 aa7.29□□□□□ -1.24
NEDD4L-227ENST00000590020 RPL28P46779 137 aaKnown RBP7.29□□□□□ -1.24
NEDD4L-227ENST00000590020 ASB16-AS1Q495Z4 193 aa7.29□□□□□ -1.24
NEDD4L-227ENST00000590020 LINC00299Q6ZSB3 139 aa7.29□□□□□ -1.24
NEDD4L-227ENST00000590020 LINC00469Q8N7U9 141 aa7.29□□□□□ -1.24
NEDD4L-227ENST00000590020 CSDC2Q9Y534 153 aaKnown RBP7.29□□□□□ -1.24
NEDD4L-227ENST00000590020 IGHV3OR16-9A0A0B4J2B5 98 aa7.28□□□□□ -1.24
NEDD4L-227ENST00000590020 KRTAP9-7A8MTY7 169 aa7.28□□□□□ -1.24
NEDD4L-227ENST00000590020 NDUFC2-KCTD14E9PQ53 114 aa7.28□□□□□ -1.24
NEDD4L-227ENST00000590020 SMKR1H3BMG3 65 aa7.28□□□□□ -1.24
NEDD4L-227ENST00000590020 KIAA0087Q14695 138 aa7.28□□□□□ -1.24
NEDD4L-227ENST00000590020 SMIM12Q96EX1 92 aa7.28□□□□□ -1.24
NEDD4L-227ENST00000590020 KRTAP4-7Q9BYR0 210 aa7.28□□□□□ -1.24
NEDD4L-227ENST00000590020 LCE1DQ5T752 114 aa7.27□□□□□ -1.25
NEDD4L-227ENST00000590020 LINC00337Q8N6G1 96 aa7.27□□□□□ -1.25
NEDD4L-227ENST00000590020 MANBALQ9NQG1 85 aa7.27□□□□□ -1.25
NEDD4L-227ENST00000590020 K7EN84 100 aa7.26□□□□□ -1.25
NEDD4L-227ENST00000590020 BCE1O60756 84 aa7.26□□□□□ -1.25
NEDD4L-227ENST00000590020 FAM104AQ969W3 186 aa7.26□□□□□ -1.25
NEDD4L-227ENST00000590020 XAGE1AQ9HD64 81 aa7.26□□□□□ -1.25
NEDD4L-227ENST00000590020 BIN3Q9NQY0 253 aa7.26□□□□□ -1.25
NEDD4L-227ENST00000590020 MED9Q9NWA0 146 aa7.26□□□□□ -1.25
NEDD4L-227ENST00000590020 NDUFA13Q9P0J0 144 aa7.26□□□□□ -1.25
NEDD4L-227ENST00000590020 TRBV30A0A0K0K1B3 111 aa7.25□□□□□ -1.25
NEDD4L-227ENST00000590020 UMAD1C9J7I0 102 aa7.25□□□□□ -1.25
NEDD4L-227ENST00000590020 VCYO14598 125 aa7.25□□□□□ -1.25
NEDD4L-227ENST00000590020 RPL39P62891 51 aaKnown RBP7.25□□□□□ -1.25
NEDD4L-227ENST00000590020 RPL37AP8A6NKH3 93 aa7.24□□□□□ -1.25
NEDD4L-227ENST00000590020 SMLR1H3BR10 107 aa7.24□□□□□ -1.25
NEDD4L-227ENST00000590020 RAB4AP20338 218 aa7.24□□□□□ -1.25
NEDD4L-227ENST00000590020 SMAGPQ0VAQ4 97 aa7.24□□□□□ -1.25
NEDD4L-227ENST00000590020 LBHQ53QV2 105 aaPredicted RBP7.24□□□□□ -1.25
NEDD4L-227ENST00000590020 AMN1Q8IY45 258 aa7.24□□□□□ -1.25
NEDD4L-227ENST00000590020 PACRGQ96M98 296 aaPredicted RBP7.24□□□□□ -1.25
NEDD4L-227ENST00000590020 FAM210AQ96ND0 272 aa7.24□□□□□ -1.25
NEDD4L-227ENST00000590020 IGKV2D-26A0A0A0MRZ7 120 aa7.23□□□□□ -1.25
NEDD4L-227ENST00000590020 KRTAP13-3Q3SY46 172 aa7.23□□□□□ -1.25
NEDD4L-227ENST00000590020 OCC1Q8TAD7 63 aa7.23□□□□□ -1.25
NEDD4L-227ENST00000590020 IFITM10A6NMD0 228 aa7.22□□□□□ -1.25
NEDD4L-227ENST00000590020 MT1HP80294 61 aa7.22□□□□□ -1.25
NEDD4L-227ENST00000590020 MRPL55Q7Z7F7 128 aaKnown RBP7.22□□□□□ -1.25
NEDD4L-227ENST00000590020 TIMM21Q9BVV7 248 aa7.22□□□□□ -1.25
NEDD4L-227ENST00000590020 ZNF727A8MUV8 499 aa7.21□□□□□ -1.26
NEDD4L-227ENST00000590020 PDE6DO43924 150 aa7.21□□□□□ -1.26
NEDD4L-227ENST00000590020 SUMO2P61956 95 aaKnown RBP7.21□□□□□ -1.26
NEDD4L-227ENST00000590020 FAM229BQ4G0N7 80 aa7.21□□□□□ -1.26
NEDD4L-227ENST00000590020 C3orf22Q8N5N4 141 aa7.21□□□□□ -1.26
NEDD4L-227ENST00000590020 NRACQ8N912 160 aa7.21□□□□□ -1.26
NEDD4L-227ENST00000590020 KIR2DL4Q99706 377 aa7.21□□□□□ -1.26
NEDD4L-227ENST00000590020 TGIF2-C20orf24A0A0A6YYL0 155 aa7.2□□□□□ -1.26
NEDD4L-227ENST00000590020 GAGE10A6NGK3 116 aa7.2□□□□□ -1.26
NEDD4L-227ENST00000590020 GATCO43716 136 aaKnown RBP7.2□□□□□ -1.26
NEDD4L-227ENST00000590020 UBE2AP49459 152 aa7.2□□□□□ -1.26
NEDD4L-227ENST00000590020 SEC61BP60468 96 aaKnown RBP7.2□□□□□ -1.26
NEDD4L-227ENST00000590020 LINC00167Q96N53 147 aa7.2□□□□□ -1.26
NEDD4L-227ENST00000590020 TMEM191AQ9H0A3 160 aa7.2□□□□□ -1.26
NEDD4L-227ENST00000590020 HBBP68871 147 aa7.19□□□□□ -1.26
NEDD4L-227ENST00000590020 KRTAP13-1Q8IUC0 172 aa7.19□□□□□ -1.26
NEDD4L-227ENST00000590020 TMEM18Q96B42 140 aa7.19□□□□□ -1.26
NEDD4L-227ENST00000590020 KRTAP19-2Q3LHN2 52 aa7.18□□□□□ -1.26
NEDD4L-227ENST00000590020 BORCS7Q96B45 105 aa7.18□□□□□ -1.26
NEDD4L-227ENST00000590020 A8MWL6 223 aa7.17□□□□□ -1.26
NEDD4L-227ENST00000590020 TOMM7Q9P0U1 55 aa7.17□□□□□ -1.26
NEDD4L-227ENST00000590020 A0A1B0GUT8 65 aa7.16□□□□□ -1.26
NEDD4L-227ENST00000590020 FP248Q71RG6 208 aaPredicted RBP7.16□□□□□ -1.26
NEDD4L-227ENST00000590020 TP73-AS1Q9UF72 201 aa7.16□□□□□ -1.26
NEDD4L-227ENST00000590020 HIGD1CA8MV81 97 aa7.15□□□□□ -1.26
NEDD4L-227ENST00000590020 CFC1BP0CG36 223 aa7.15□□□□□ -1.26
NEDD4L-227ENST00000590020 KRTAP10-6P60371 365 aaPredicted RBP7.15□□□□□ -1.26
NEDD4L-227ENST00000590020 RPL32P62910 135 aaKnown RBP7.15□□□□□ -1.26
NEDD4L-227ENST00000590020 PRLHP81277 87 aa7.15□□□□□ -1.26
NEDD4L-227ENST00000590020 MRPS36P82909 103 aaKnown RBP7.15□□□□□ -1.26
NEDD4L-227ENST00000590020 SPANXA1Q9NS26 97 aa7.15□□□□□ -1.26
NEDD4L-227ENST00000590020 CKS1BP61024 79 aa7.14□□□□□ -1.27
NEDD4L-227ENST00000590020 ZNF345Q14585 488 aa7.14□□□□□ -1.27
NEDD4L-227ENST00000590020 KANTRA0A1W2PQU2 76 aa7.13□□□□□ -1.27
NEDD4L-227ENST00000590020 TCAPO15273 167 aa7.13□□□□□ -1.27
NEDD4L-227ENST00000590020 SCO1O75880 301 aa7.13□□□□□ -1.27
NEDD4L-227ENST00000590020 PRSS2P07478 247 aa7.13□□□□□ -1.27
NEDD4L-227ENST00000590020 CTAG1AP78358 180 aa7.13□□□□□ -1.27
NEDD4L-227ENST00000590020 PNRC1Q12796 327 aaPredicted RBP7.13□□□□□ -1.27
NEDD4L-227ENST00000590020 MRPL51Q4U2R6 128 aaKnown RBP7.13□□□□□ -1.27
NEDD4L-227ENST00000590020 IGKV2-28A0A075B6P5 120 aa7.12□□□□□ -1.27
NEDD4L-227ENST00000590020 PPP1R2P9O14990 202 aa7.12□□□□□ -1.27
NEDD4L-227ENST00000590020 PPP1R17O96001 155 aa7.12□□□□□ -1.27
NEDD4L-227ENST00000590020 IGKV2D-28P01615 120 aa7.12□□□□□ -1.27
NEDD4L-227ENST00000590020 C6orf226Q5I0X4 101 aa7.12□□□□□ -1.27
NEDD4L-227ENST00000590020 ZC2HC1BQ5TFG8 222 aa7.12□□□□□ -1.27
NEDD4L-227ENST00000590020 FAM231DQ6ZW35 169 aa7.12□□□□□ -1.27
NEDD4L-227ENST00000590020 TEX46H3BTG2 121 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms