RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 CTDSP1Q9GZU7 261 aa12.36□□□□□ -0.43
TPM4-208ENST00000588410 IFITM2Q01629 132 aa12.35□□□□□ -0.43
TPM4-208ENST00000588410 SPAG11BQ08648 103 aa12.35□□□□□ -0.43
TPM4-208ENST00000588410 Q6ZRU5 148 aa12.35□□□□□ -0.43
TPM4-208ENST00000588410 Q8N8P6 123 aa12.35□□□□□ -0.43
TPM4-208ENST00000588410 FAM104AQ969W3 186 aa12.35□□□□□ -0.43
TPM4-208ENST00000588410 C2orf48Q96LS8 159 aa12.35□□□□□ -0.43
TPM4-208ENST00000588410 LOC107984640A0A0U1RRK4 108 aa12.34□□□□□ -0.43
TPM4-208ENST00000588410 HNRNPA3P51991 378 aaKnown RBP12.34□□□□□ -0.43
TPM4-208ENST00000588410 PYGO1Q9Y3Y4 419 aa12.34□□□□□ -0.43
TPM4-208ENST00000588410 ADCYAP1P18509 176 aa12.33□□□□□ -0.44
TPM4-208ENST00000588410 GAGE2BQ13066 116 aa12.33□□□□□ -0.44
TPM4-208ENST00000588410 OR10D4PQ8NGN7 298 aa12.33□□□□□ -0.44
TPM4-208ENST00000588410 TGIF2-C20orf24A0A0A6YYL0 155 aa12.32□□□□□ -0.44
TPM4-208ENST00000588410 ORMDL2Q53FV1 153 aa12.32□□□□□ -0.44
TPM4-208ENST00000588410 ORAOV1Q8WV07 137 aa12.32□□□□□ -0.44
TPM4-208ENST00000588410 TMEM141Q96I45 108 aa12.32□□□□□ -0.44
TPM4-208ENST00000588410 CYSLTR1Q9Y271 337 aa12.32□□□□□ -0.44
TPM4-208ENST00000588410 IGLV4-3A0A075B6K6 122 aa12.31□□□□□ -0.44
TPM4-208ENST00000588410 IGHV3OR16-9A0A0B4J2B5 98 aa12.31□□□□□ -0.44
TPM4-208ENST00000588410 NXT2Q9NPJ8 142 aaKnown RBP12.31□□□□□ -0.44
TPM4-208ENST00000588410 TRAV9-1A0A075B6T8 112 aa12.3□□□□□ -0.44
TPM4-208ENST00000588410 S100PP25815 95 aa12.3□□□□□ -0.44
TPM4-208ENST00000588410 PTTG1IPP53801 180 aa12.3□□□□□ -0.44
TPM4-208ENST00000588410 C2orf66Q6UXQ4 117 aa12.3□□□□□ -0.44
TPM4-208ENST00000588410 Q6ZN92 141 aa12.3□□□□□ -0.44
TPM4-208ENST00000588410 TEX43Q6ZNM6 134 aa12.3□□□□□ -0.44
TPM4-208ENST00000588410 COMMD7Q86VX2 200 aa12.3□□□□□ -0.44
TPM4-208ENST00000588410 SEC11CQ9BY50 192 aa12.3□□□□□ -0.44
TPM4-208ENST00000588410 K7EMI3 77 aa12.29□□□□□ -0.44
TPM4-208ENST00000588410 C2orf88Q9BSF0 95 aa12.29□□□□□ -0.44
TPM4-208ENST00000588410 F8WDY8 70 aa12.28□□□□□ -0.44
TPM4-208ENST00000588410 RPL18AQ02543 176 aaKnown RBP12.28□□□□□ -0.44
TPM4-208ENST00000588410 G0S2P27469 103 aa12.27□□□□□ -0.45
TPM4-208ENST00000588410 RNF151Q2KHN1 245 aa12.27□□□□□ -0.45
TPM4-208ENST00000588410 VCX2Q9H322 139 aa12.27□□□□□ -0.45
TPM4-208ENST00000588410 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.26□□□□□ -0.45
TPM4-208ENST00000588410 NDUFA1O15239 70 aa12.26□□□□□ -0.45
TPM4-208ENST00000588410 KIAA1644Q3SXP7 199 aa12.26□□□□□ -0.45
TPM4-208ENST00000588410 LINC00242Q5T6M2 205 aa12.26□□□□□ -0.45
TPM4-208ENST00000588410 A0A087WZ39 114 aa12.25□□□□□ -0.45
TPM4-208ENST00000588410 A0A0J9YXV3 536 aa12.25□□□□□ -0.45
TPM4-208ENST00000588410 PRR3P79522 188 aaKnown RBP12.25□□□□□ -0.45
TPM4-208ENST00000588410 MRPL35Q9NZE8 188 aaKnown RBP12.25□□□□□ -0.45
TPM4-208ENST00000588410 NPSP0C0P6 89 aa12.24□□□□□ -0.45
TPM4-208ENST00000588410 UBE2D1P51668 147 aa12.24□□□□□ -0.45
TPM4-208ENST00000588410 LRP1Q07954 4544 aaKnown RBP12.23□□□□□ -0.45
TPM4-208ENST00000588410 PAPPA-AS1Q5QFB9 102 aa12.23□□□□□ -0.45
TPM4-208ENST00000588410 ZC2HC1BQ5TFG8 222 aa12.22□□□□□ -0.45
TPM4-208ENST00000588410 AMELXQ99217 191 aa12.22□□□□□ -0.45
TPM4-208ENST00000588410 GNB1LQ9BYB4 327 aa12.22□□□□□ -0.45
TPM4-208ENST00000588410 IGIPA6NJ69 53 aa12.21□□□□□ -0.45
TPM4-208ENST00000588410 COX19Q49B96 90 aa12.21□□□□□ -0.45
TPM4-208ENST00000588410 UNQ6190/PRO20217Q6UXQ8 127 aa12.21□□□□□ -0.45
TPM4-208ENST00000588410 FAT3Q8TDW7 4589 aa12.21□□□□□ -0.45
TPM4-208ENST00000588410 PKHD1L1Q86WI1 4243 aa12.2□□□□□ -0.46
TPM4-208ENST00000588410 A0A1W2PNN7 141 aa12.2□□□□□ -0.46
TPM4-208ENST00000588410 C9orf116Q5BN46 136 aaPredicted RBP12.2□□□□□ -0.46
TPM4-208ENST00000588410 C10orf25Q5T742 122 aa12.2□□□□□ -0.46
TPM4-208ENST00000588410 SERTAD4-AS1Q5TG53 156 aa12.2□□□□□ -0.46
TPM4-208ENST00000588410 Q6ZRP5 223 aa12.2□□□□□ -0.46
TPM4-208ENST00000588410 LINC00173Q6ZV60 143 aa12.2□□□□□ -0.46
TPM4-208ENST00000588410 RPS10P5Q9NQ39 176 aa12.2□□□□□ -0.46
TPM4-208ENST00000588410 RHEBQ15382 184 aa12.19□□□□□ -0.46
TPM4-208ENST00000588410 LINC01561Q8N1V8 128 aa12.19□□□□□ -0.46
TPM4-208ENST00000588410 TOMM6Q96B49 74 aa12.19□□□□□ -0.46
TPM4-208ENST00000588410 SEC11AP67812 179 aa12.18□□□□□ -0.46
TPM4-208ENST00000588410 KIAA0087Q14695 138 aa12.18□□□□□ -0.46
TPM4-208ENST00000588410 C10orf91Q5T1B1 145 aa12.18□□□□□ -0.46
TPM4-208ENST00000588410 TIMM17AQ99595 171 aa12.18□□□□□ -0.46
TPM4-208ENST00000588410 C6orf48Q9UBA6 75 aa12.18□□□□□ -0.46
TPM4-208ENST00000588410 CARHSP1Q9Y2V2 147 aaKnown RBP12.18□□□□□ -0.46
TPM4-208ENST00000588410 MT-ND6P03923 174 aa12.17□□□□□ -0.46
TPM4-208ENST00000588410 PRSS2P07478 247 aa12.17□□□□□ -0.46
TPM4-208ENST00000588410 PACRGQ96M98 296 aaPredicted RBP12.17□□□□□ -0.46
TPM4-208ENST00000588410 SCGB3A1Q96QR1 104 aa12.17□□□□□ -0.46
TPM4-208ENST00000588410 ALKBH7Q9BT30 221 aaPredicted RBP12.17□□□□□ -0.46
TPM4-208ENST00000588410 TLX1NBP0CAT3 122 aa12.16□□□□□ -0.46
TPM4-208ENST00000588410 FABP9Q0Z7S8 132 aa12.16□□□□□ -0.46
TPM4-208ENST00000588410 MRPL18Q9H0U6 180 aaKnown RBP12.16□□□□□ -0.46
TPM4-208ENST00000588410 GEMIN7Q9H840 131 aaKnown RBP12.16□□□□□ -0.46
TPM4-208ENST00000588410 TRBV30A0A0K0K1B3 111 aa12.15□□□□□ -0.46
TPM4-208ENST00000588410 LINC01549A6NIU2 74 aa12.15□□□□□ -0.46
TPM4-208ENST00000588410 HERVK_113P63121 156 aa12.15□□□□□ -0.46
TPM4-208ENST00000588410 GAGE2EQ4V326 116 aa12.15□□□□□ -0.46
TPM4-208ENST00000588410 C2orf82Q6UX34 121 aa12.15□□□□□ -0.46
TPM4-208ENST00000588410 ERASQ7Z444 233 aa12.15□□□□□ -0.46
TPM4-208ENST00000588410 TOMM7Q9P0U1 55 aa12.15□□□□□ -0.46
TPM4-208ENST00000588410 GAGE2DQ9UEU5 116 aa12.15□□□□□ -0.46
TPM4-208ENST00000588410 SPINK6Q6UWN8 80 aa12.14□□□□□ -0.47
TPM4-208ENST00000588410 FA2HQ7L5A8 372 aa12.14□□□□□ -0.47
TPM4-208ENST00000588410 FAM19A3Q7Z5A8 133 aa12.14□□□□□ -0.47
TPM4-208ENST00000588410 SMCO4Q9NRQ5 59 aa12.14□□□□□ -0.47
TPM4-208ENST00000588410 CKS1BP61024 79 aa12.13□□□□□ -0.47
TPM4-208ENST00000588410 C6orf226Q5I0X4 101 aa12.13□□□□□ -0.47
TPM4-208ENST00000588410 PHF5AQ7RTV0 110 aaKnown RBP12.12□□□□□ -0.47
TPM4-208ENST00000588410 MT1HL1P0DM35 61 aa12.11□□□□□ -0.47
TPM4-208ENST00000588410 CDKN2A-AS1Q9UH64 79 aa12.11□□□□□ -0.47
TPM4-208ENST00000588410 LINC01546A6NGU7 62 aa12.1□□□□□ -0.47
TPM4-208ENST00000588410 NDUFC2-KCTD14E9PQ53 114 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms