RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 LINC00482Q8N8I6 264 aa10.54□□□□□ -0.72
MBD1-212ENST00000585672 MOB4Q9Y3A3 225 aa10.54□□□□□ -0.72
MBD1-212ENST00000585672 JMJD7-PLA2G4BH0Y9G9 81 aa10.54□□□□□ -0.72
MBD1-212ENST00000585672 BLCAPP62952 87 aa10.54□□□□□ -0.72
MBD1-212ENST00000585672 Q6ZTI0 123 aa10.54□□□□□ -0.72
MBD1-212ENST00000585672 LINC00158P58513 81 aa10.53□□□□□ -0.72
MBD1-212ENST00000585672 SNRPD3P62318 126 aaKnown RBP10.53□□□□□ -0.72
MBD1-212ENST00000585672 GVINP1Q7Z2Y8 2422 aa10.53□□□□□ -0.72
MBD1-212ENST00000585672 IGHV3-53P01767 116 aa10.52□□□□□ -0.72
MBD1-212ENST00000585672 PLA2G2CQ5R387 149 aa10.52□□□□□ -0.72
MBD1-212ENST00000585672 NBL1P41271 181 aa10.52□□□□□ -0.73
MBD1-212ENST00000585672 LINC00167Q96N53 147 aa10.51□□□□□ -0.73
MBD1-212ENST00000585672 K7EMT4 169 aa10.51□□□□□ -0.73
MBD1-212ENST00000585672 K7EQG2 157 aa10.5□□□□□ -0.73
MBD1-212ENST00000585672 FAM229BQ4G0N7 80 aa10.5□□□□□ -0.73
MBD1-212ENST00000585672 COX7B2Q8TF08 81 aa10.5□□□□□ -0.73
MBD1-212ENST00000585672 HRNRQ86YZ3 2850 aaPredicted RBP10.5□□□□□ -0.73
MBD1-212ENST00000585672 PAX4O43316 350 aa10.49□□□□□ -0.73
MBD1-212ENST00000585672 GRNP28799 593 aaKnown RBP10.49□□□□□ -0.73
MBD1-212ENST00000585672 CDC42SE2Q9NRR3 84 aa10.49□□□□□ -0.73
MBD1-212ENST00000585672 TOMM7Q9P0U1 55 aa10.49□□□□□ -0.73
MBD1-212ENST00000585672 CELSR1Q9NYQ6 3014 aa10.48□□□□□ -0.73
MBD1-212ENST00000585672 CCL21O00585 134 aa10.48□□□□□ -0.73
MBD1-212ENST00000585672 MPLKIPQ8TAP9 179 aa10.48□□□□□ -0.73
MBD1-212ENST00000585672 LY6G6DO95868 133 aa10.47□□□□□ -0.73
MBD1-212ENST00000585672 LINC01547P58512 204 aaPredicted RBP10.47□□□□□ -0.73
MBD1-212ENST00000585672 Q8N814 137 aa10.47□□□□□ -0.73
MBD1-212ENST00000585672 H3BUA1 57 aa10.47□□□□□ -0.73
MBD1-212ENST00000585672 TMEM256-PLSCR3K7ERE1 68 aa10.47□□□□□ -0.73
MBD1-212ENST00000585672 DEFB124Q8NES8 71 aa10.47□□□□□ -0.73
MBD1-212ENST00000585672 NTM-AS1Q6ZSK4 140 aa10.46□□□□□ -0.73
MBD1-212ENST00000585672 TRBV6-4A0A1B0GX49 114 aa10.46□□□□□ -0.74
MBD1-212ENST00000585672 NDUFC1O43677 76 aa10.46□□□□□ -0.74
MBD1-212ENST00000585672 Q8NA96 180 aa10.46□□□□□ -0.74
MBD1-212ENST00000585672 SORL1Q92673 2214 aa10.45□□□□□ -0.74
MBD1-212ENST00000585672 CFHR3Q02985 330 aa10.45□□□□□ -0.74
MBD1-212ENST00000585672 TM2D3Q9BRN9 247 aa10.45□□□□□ -0.74
MBD1-212ENST00000585672 ATP5EP56381 51 aaPredicted RBP10.45□□□□□ -0.74
MBD1-212ENST00000585672 ANKHD1Q8IWZ3 2542 aaKnown RBP10.45□□□□□ -0.74
MBD1-212ENST00000585672 A0A096LNT2 108 aa10.44□□□□□ -0.74
MBD1-212ENST00000585672 M0R2N4 97 aa10.44□□□□□ -0.74
MBD1-212ENST00000585672 RNASE1P07998 156 aaKnown RBP10.44□□□□□ -0.74
MBD1-212ENST00000585672 HAMPP81172 84 aa10.44□□□□□ -0.74
MBD1-212ENST00000585672 TRBV7-4A0A0J9YYF1 115 aa10.44□□□□□ -0.74
MBD1-212ENST00000585672 MIFP14174 115 aa10.44□□□□□ -0.74
MBD1-212ENST00000585672 IGLV1-40P01703 118 aa10.43□□□□□ -0.74
MBD1-212ENST00000585672 LY6EQ16553 131 aa10.43□□□□□ -0.74
MBD1-212ENST00000585672 C11orf71Q6IPW1 123 aa10.43□□□□□ -0.74
MBD1-212ENST00000585672 COL6A6A6NMZ7 2263 aa10.43□□□□□ -0.74
MBD1-212ENST00000585672 IBA57-AS1B1ANH7 110 aa10.43□□□□□ -0.74
MBD1-212ENST00000585672 Q6ZQT0 140 aa10.43□□□□□ -0.74
MBD1-212ENST00000585672 K7EQD1 137 aa10.42□□□□□ -0.74
MBD1-212ENST00000585672 IL17DQ8TAD2 202 aa10.42□□□□□ -0.74
MBD1-212ENST00000585672 NANOS2P60321 138 aaKnown RBP10.42□□□□□ -0.74
MBD1-212ENST00000585672 Q6ZVQ6 151 aa10.41□□□□□ -0.74
MBD1-212ENST00000585672 Q8N3U1 123 aa10.41□□□□□ -0.74
MBD1-212ENST00000585672 BRD3OSQ6XYD6 125 aa10.4□□□□□ -0.74
MBD1-212ENST00000585672 C11orf68Q9H3H3 251 aaKnown RBP10.4□□□□□ -0.75
MBD1-212ENST00000585672 ANKRD11Q6UB99 2663 aaPredicted RBP10.39□□□□□ -0.75
MBD1-212ENST00000585672 PRR3P79522 188 aaKnown RBP10.39□□□□□ -0.75
MBD1-212ENST00000585672 SPTBN4Q9H254 2564 aa10.38□□□□□ -0.75
MBD1-212ENST00000585672 CEP295Q9C0D2 2601 aa10.37□□□□□ -0.75
MBD1-212ENST00000585672 IGKV3OR2-268A0A0C4DH90 116 aa10.37□□□□□ -0.75
MBD1-212ENST00000585672 TMEM254Q8TBM7 123 aa10.37□□□□□ -0.75
MBD1-212ENST00000585672 LOC110117498A0A087WWA1 95 aa10.36□□□□□ -0.75
MBD1-212ENST00000585672 CXCL6P80162 114 aa10.36□□□□□ -0.75
MBD1-212ENST00000585672 ZNF843Q8N446 348 aa10.36□□□□□ -0.75
MBD1-212ENST00000585672 COL12A1Q99715 3063 aa10.35□□□□□ -0.75
MBD1-212ENST00000585672 LMO4P61968 165 aa10.35□□□□□ -0.75
MBD1-212ENST00000585672 NREPQ16612 68 aa10.35□□□□□ -0.75
MBD1-212ENST00000585672 DEFB131AP59861 70 aa10.35□□□□□ -0.75
MBD1-212ENST00000585672 PMAIP1Q13794 54 aa10.35□□□□□ -0.75
MBD1-212ENST00000585672 UBE2L6O14933 153 aa10.34□□□□□ -0.75
MBD1-212ENST00000585672 AKAP6Q13023 2319 aa10.34□□□□□ -0.75
MBD1-212ENST00000585672 IGHV3OR16-9A0A0B4J2B5 98 aa10.34□□□□□ -0.75
MBD1-212ENST00000585672 TRBV10-1A0A0K0K1A3 114 aa10.34□□□□□ -0.75
MBD1-212ENST00000585672 ESRGQ1W209 222 aa10.34□□□□□ -0.75
MBD1-212ENST00000585672 H3BUX3 64 aa10.33□□□□□ -0.76
MBD1-212ENST00000585672 SCXQ7RTU7 201 aa10.33□□□□□ -0.76
MBD1-212ENST00000585672 C10orf99Q6UWK7 81 aa10.33□□□□□ -0.76
MBD1-212ENST00000585672 SPTA1P02549 2419 aa10.32□□□□□ -0.76
MBD1-212ENST00000585672 A6NDX4 124 aa10.32□□□□□ -0.76
MBD1-212ENST00000585672 A8MTW9 85 aa10.32□□□□□ -0.76
MBD1-212ENST00000585672 PRR15Q8IV56 129 aa10.32□□□□□ -0.76
MBD1-212ENST00000585672 A0A087WZ39 114 aa10.32□□□□□ -0.76
MBD1-212ENST00000585672 PLAC8L1A1L4L8 177 aa10.32□□□□□ -0.76
MBD1-212ENST00000585672 TMEM89A2RUT3 159 aa10.32□□□□□ -0.76
MBD1-212ENST00000585672 C6orf223Q8N319 242 aa10.31□□□□□ -0.76
MBD1-212ENST00000585672 LAMTOR3Q9UHA4 124 aa10.31□□□□□ -0.76
MBD1-212ENST00000585672 C19orf84I3L1E1 186 aa10.31□□□□□ -0.76
MBD1-212ENST00000585672 ZNF561-AS1K7EIQ3 104 aa10.31□□□□□ -0.76
MBD1-212ENST00000585672 Q6ZTC4 211 aa10.31□□□□□ -0.76
MBD1-212ENST00000585672 SPTAN1Q13813 2472 aaKnown RBP10.3□□□□□ -0.76
MBD1-212ENST00000585672 VPS13CQ709C8 3753 aa10.29□□□□□ -0.76
MBD1-212ENST00000585672 ACACAQ13085 2346 aa10.29□□□□□ -0.76
MBD1-212ENST00000585672 TRGV1A0A0A0MS02 117 aa10.29□□□□□ -0.76
MBD1-212ENST00000585672 BPY2O14599 106 aa10.29□□□□□ -0.76
MBD1-212ENST00000585672 C6orf99Q4VX62 202 aa10.29□□□□□ -0.76
MBD1-212ENST00000585672 CRYBG3Q68DQ2 2970 aa10.29□□□□□ -0.76
MBD1-212ENST00000585672 IGLV4-60A0A075B6I1 120 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms