RNA–Protein interactions for RNA: ENST00000585268.1

CRLF3-206, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-206ENST00000585268 CKS2P33552 79 aa3.33□□□□□ -1.88
CRLF3-206ENST00000585268 CLPSL2Q6UWE3 100 aa3.33□□□□□ -1.88
CRLF3-206ENST00000585268 C20orf203Q8NBC4 194 aa3.33□□□□□ -1.88
CRLF3-206ENST00000585268 TMEM70Q9BUB7 260 aa3.33□□□□□ -1.88
CRLF3-206ENST00000585268 PRR34Q9NV39 138 aa3.33□□□□□ -1.88
CRLF3-206ENST00000585268 DNAH7Q8WXX0 4024 aa3.33□□□□□ -1.88
CRLF3-206ENST00000585268 A0A087WZ39 114 aa3.32□□□□□ -1.88
CRLF3-206ENST00000585268 C16orf90A8MZG2 172 aa3.32□□□□□ -1.88
CRLF3-206ENST00000585268 D6R8Y8 96 aa3.32□□□□□ -1.88
CRLF3-206ENST00000585268 UBE2L6O14933 153 aa3.32□□□□□ -1.88
CRLF3-206ENST00000585268 NPYP01303 97 aa3.32□□□□□ -1.88
CRLF3-206ENST00000585268 APCSP02743 223 aa3.32□□□□□ -1.88
CRLF3-206ENST00000585268 S100A8P05109 93 aa3.32□□□□□ -1.88
CRLF3-206ENST00000585268 ESDP10768 282 aa3.32□□□□□ -1.88
CRLF3-206ENST00000585268 PKIAP61925 76 aa3.32□□□□□ -1.88
CRLF3-206ENST00000585268 Q0VG73 95 aa3.32□□□□□ -1.88
CRLF3-206ENST00000585268 COX19Q49B96 90 aa3.32□□□□□ -1.88
CRLF3-206ENST00000585268 TMEM136Q6ZRR5 245 aa3.32□□□□□ -1.88
CRLF3-206ENST00000585268 LINC00269Q8N2A0 174 aa3.32□□□□□ -1.88
CRLF3-206ENST00000585268 BAALCQ8WXS3 180 aa3.32□□□□□ -1.88
CRLF3-206ENST00000585268 GNB1LQ9BYB4 327 aa3.32□□□□□ -1.88
CRLF3-206ENST00000585268 DNAH1Q9P2D7 4330 aa3.32□□□□□ -1.88
CRLF3-206ENST00000585268 IGLV10-54A0A075B6I4 117 aa3.31□□□□□ -1.88
CRLF3-206ENST00000585268 TRBV27A0A0K0K1C4 114 aa3.31□□□□□ -1.88
CRLF3-206ENST00000585268 C5orf52A6NGY3 159 aa3.31□□□□□ -1.88
CRLF3-206ENST00000585268 PHOX2AO14813 284 aa3.31□□□□□ -1.88
CRLF3-206ENST00000585268 PPP1R17O96001 155 aa3.31□□□□□ -1.88
CRLF3-206ENST00000585268 CRPP02741 224 aa3.31□□□□□ -1.88
CRLF3-206ENST00000585268 MT-ND6P03923 174 aa3.31□□□□□ -1.88
CRLF3-206ENST00000585268 FGF6P10767 208 aa3.31□□□□□ -1.88
CRLF3-206ENST00000585268 FCER1GP30273 86 aa3.31□□□□□ -1.88
CRLF3-206ENST00000585268 REG3AQ06141 175 aa3.31□□□□□ -1.88
CRLF3-206ENST00000585268 FABP9Q0Z7S8 132 aa3.31□□□□□ -1.88
CRLF3-206ENST00000585268 AMMECR1LQ6DCA0 310 aa3.31□□□□□ -1.88
CRLF3-206ENST00000585268 RNASEKQ6P5S7 137 aaKnown RBP3.31□□□□□ -1.88
CRLF3-206ENST00000585268 KRTAP26-1Q6PEX3 210 aa3.31□□□□□ -1.88
CRLF3-206ENST00000585268 Q8N814 137 aa3.31□□□□□ -1.88
CRLF3-206ENST00000585268 RMI2Q96E14 147 aa3.31□□□□□ -1.88
CRLF3-206ENST00000585268 PRELID3AQ96N28 172 aa3.31□□□□□ -1.88
CRLF3-206ENST00000585268 C20orf78Q9BR46 151 aa3.31□□□□□ -1.88
CRLF3-206ENST00000585268 PLECQ15149 4684 aaKnown RBP3.3□□□□□ -1.88
CRLF3-206ENST00000585268 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.3□□□□□ -1.88
CRLF3-206ENST00000585268 IGLV4-3A0A075B6K6 122 aa3.3□□□□□ -1.88
CRLF3-206ENST00000585268 IGKV3OR2-268A0A0C4DH90 116 aa3.3□□□□□ -1.88
CRLF3-206ENST00000585268 LOC389332A0A1B0GUA5 103 aa3.3□□□□□ -1.88
CRLF3-206ENST00000585268 TCAPO15273 167 aa3.3□□□□□ -1.88
CRLF3-206ENST00000585268 HLA-DQA1P01909 254 aa3.3□□□□□ -1.88
CRLF3-206ENST00000585268 PPBPP02775 128 aa3.3□□□□□ -1.88
CRLF3-206ENST00000585268 TRGC2P03986 189 aa3.3□□□□□ -1.88
CRLF3-206ENST00000585268 KRTAP10-1P60331 282 aa3.3□□□□□ -1.88
CRLF3-206ENST00000585268 RPL32P62910 135 aaKnown RBP3.3□□□□□ -1.88
CRLF3-206ENST00000585268 MIAQ16674 131 aa3.3□□□□□ -1.88
CRLF3-206ENST00000585268 LBHQ53QV2 105 aaPredicted RBP3.3□□□□□ -1.88
CRLF3-206ENST00000585268 ORMDL3Q8N138 153 aa3.3□□□□□ -1.88
CRLF3-206ENST00000585268 SMIM2Q9BVW6 85 aa3.3□□□□□ -1.88
CRLF3-206ENST00000585268 TRAPPC1Q9Y5R8 145 aa3.3□□□□□ -1.88
CRLF3-206ENST00000585268 SACSQ9NZJ4 4579 aa3.3□□□□□ -1.88
CRLF3-206ENST00000585268 RYR3Q15413 4870 aa3.3□□□□□ -1.88
CRLF3-206ENST00000585268 RPL39P62891 51 aaKnown RBP3.29□□□□□ -1.88
CRLF3-206ENST00000585268 RNASE13Q5GAN3 156 aaKnown RBP3.29□□□□□ -1.88
CRLF3-206ENST00000585268 OR5A1Q8NGJ0 315 aa3.29□□□□□ -1.88
CRLF3-206ENST00000585268 TMEM101Q96IK0 257 aa3.29□□□□□ -1.88
CRLF3-206ENST00000585268 KIR2DL4Q99706 377 aa3.29□□□□□ -1.88
CRLF3-206ENST00000585268 ALKBH7Q9BT30 221 aaPredicted RBP3.29□□□□□ -1.88
CRLF3-206ENST00000585268 CDC42SE2Q9NRR3 84 aa3.29□□□□□ -1.88
CRLF3-206ENST00000585268 UBE2D4Q9Y2X8 147 aa3.29□□□□□ -1.88
CRLF3-206ENST00000585268 RYR2Q92736 4967 aa3.29□□□□□ -1.88
CRLF3-206ENST00000585268 KMT2AQ03164 3969 aa3.28□□□□□ -1.88
CRLF3-206ENST00000585268 TRAV8-4A0A0B4J246 113 aa3.28□□□□□ -1.88
CRLF3-206ENST00000585268 LINC00959A0A1B0GUT2 108 aa3.28□□□□□ -1.88
CRLF3-206ENST00000585268 C1orf196B1AJZ1 125 aa3.28□□□□□ -1.88
CRLF3-206ENST00000585268 ZNF25P17030 456 aaPredicted RBP3.28□□□□□ -1.88
CRLF3-206ENST00000585268 LINC01620Q4KN68 170 aa3.28□□□□□ -1.88
CRLF3-206ENST00000585268 HIGD2BQ4VC39 106 aa3.28□□□□□ -1.88
CRLF3-206ENST00000585268 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
CRLF3-206ENST00000585268 Q6ZUT4 128 aa3.28□□□□□ -1.88
CRLF3-206ENST00000585268 MRPL52Q86TS9 123 aaKnown RBP3.28□□□□□ -1.88
CRLF3-206ENST00000585268 ZNF664Q8N3J9 261 aa3.28□□□□□ -1.88
CRLF3-206ENST00000585268 CHCHD10Q8WYQ3 142 aaPredicted RBP3.28□□□□□ -1.88
CRLF3-206ENST00000585268 FAM104AQ969W3 186 aa3.28□□□□□ -1.88
CRLF3-206ENST00000585268 MAP1LC3AQ9H492 121 aa3.28□□□□□ -1.88
CRLF3-206ENST00000585268 LAMTOR2Q9Y2Q5 125 aa3.28□□□□□ -1.88
CRLF3-206ENST00000585268 HYDINQ4G0P3 5121 aa3.28□□□□□ -1.88
CRLF3-206ENST00000585268 CCL25O15444 150 aa3.27□□□□□ -1.89
CRLF3-206ENST00000585268 HIST1H2BKO60814 126 aa3.27□□□□□ -1.89
CRLF3-206ENST00000585268 HIST1H2BJP06899 126 aa3.27□□□□□ -1.89
CRLF3-206ENST00000585268 HIST1H2BOP23527 126 aa3.27□□□□□ -1.89
CRLF3-206ENST00000585268 HIST1H2BBP33778 126 aa3.27□□□□□ -1.89
CRLF3-206ENST00000585268 IFI27P40305 119 aaPredicted RBP3.27□□□□□ -1.89
CRLF3-206ENST00000585268 HIST1H2BDP58876 126 aa3.27□□□□□ -1.89
CRLF3-206ENST00000585268 HIST1H2BCP62807 126 aa3.27□□□□□ -1.89
CRLF3-206ENST00000585268 HAMPP81172 84 aa3.27□□□□□ -1.89
CRLF3-206ENST00000585268 HIST2H2BEQ16778 126 aa3.27□□□□□ -1.89
CRLF3-206ENST00000585268 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.27□□□□□ -1.89
CRLF3-206ENST00000585268 Q8N8P6 123 aa3.27□□□□□ -1.89
CRLF3-206ENST00000585268 HIST1H2BHQ93079 126 aa3.27□□□□□ -1.89
CRLF3-206ENST00000585268 HIST1H2BNQ99877 126 aa3.27□□□□□ -1.89
CRLF3-206ENST00000585268 HIST1H2BMQ99879 126 aa3.27□□□□□ -1.89
CRLF3-206ENST00000585268 TIMM21Q9BVV7 248 aa3.27□□□□□ -1.89
CRLF3-206ENST00000585268 CSDC2Q9Y534 153 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms