RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 PYGO1Q9Y3Y4 419 aa7.11□□□□□ -1.27
SS18-221ENST00000582448 hDV102S1A0JD36 115 aa7.1□□□□□ -1.27
SS18-221ENST00000582448 TMEM101Q96IK0 257 aa7.1□□□□□ -1.27
SS18-221ENST00000582448 MRPL35Q9NZE8 188 aaKnown RBP7.1□□□□□ -1.27
SS18-221ENST00000582448 TRBV25-1A0A075B6N4 114 aa7.09□□□□□ -1.27
SS18-221ENST00000582448 DEFB131BA0A096LNP1 70 aa7.09□□□□□ -1.27
SS18-221ENST00000582448 H7C423 109 aa7.09□□□□□ -1.27
SS18-221ENST00000582448 MAJINQ3KP22 176 aa7.09□□□□□ -1.27
SS18-221ENST00000582448 AMMECR1LQ6DCA0 310 aa7.09□□□□□ -1.27
SS18-221ENST00000582448 SLC25A34Q6PIV7 304 aa7.09□□□□□ -1.27
SS18-221ENST00000582448 C2orf88Q9BSF0 95 aa7.09□□□□□ -1.27
SS18-221ENST00000582448 TMEM243Q9BU79 118 aa7.09□□□□□ -1.27
SS18-221ENST00000582448 TIMM21Q9BVV7 248 aa7.09□□□□□ -1.27
SS18-221ENST00000582448 CST9LQ9H4G1 147 aa7.09□□□□□ -1.27
SS18-221ENST00000582448 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.08□□□□□ -1.28
SS18-221ENST00000582448 IGKV2-29A2NJV5 120 aaPredicted RBP7.08□□□□□ -1.28
SS18-221ENST00000582448 F5H768 121 aa7.08□□□□□ -1.28
SS18-221ENST00000582448 IGLC3P0DOY3 106 aa7.08□□□□□ -1.28
SS18-221ENST00000582448 HNRNPA3P51991 378 aaKnown RBP7.08□□□□□ -1.28
SS18-221ENST00000582448 HERVK_113P61574 105 aa7.08□□□□□ -1.28
SS18-221ENST00000582448 SH2D6Q7Z4S9 175 aa7.08□□□□□ -1.28
SS18-221ENST00000582448 UBE2DNLQ8IWF7 75 aa7.08□□□□□ -1.28
SS18-221ENST00000582448 ATP6V0E2Q8NHE4 81 aa7.08□□□□□ -1.28
SS18-221ENST00000582448 CHCHD7Q9BUK0 85 aa7.08□□□□□ -1.28
SS18-221ENST00000582448 Q9UF83 564 aa7.08□□□□□ -1.28
SS18-221ENST00000582448 DNAH2Q9P225 4427 aa7.08□□□□□ -1.28
SS18-221ENST00000582448 HTN3P15516 51 aa7.07□□□□□ -1.28
SS18-221ENST00000582448 STPG4Q8N801 248 aa7.07□□□□□ -1.28
SS18-221ENST00000582448 OR5A1Q8NGJ0 315 aa7.07□□□□□ -1.28
SS18-221ENST00000582448 C14orf144Q96I85 54 aa7.07□□□□□ -1.28
SS18-221ENST00000582448 CELA1Q9UNI1 258 aa7.07□□□□□ -1.28
SS18-221ENST00000582448 UBE2D4Q9Y2X8 147 aa7.07□□□□□ -1.28
SS18-221ENST00000582448 PKHD1P08F94 4074 aa7.07□□□□□ -1.28
SS18-221ENST00000582448 FAT2Q9NYQ8 4349 aa7.06□□□□□ -1.28
SS18-221ENST00000582448 IGLV4-3A0A075B6K6 122 aa7.06□□□□□ -1.28
SS18-221ENST00000582448 TRBV6-8A0A0A6YYG3 113 aa7.06□□□□□ -1.28
SS18-221ENST00000582448 LOC100131303A0A0U1RQF7 123 aa7.06□□□□□ -1.28
SS18-221ENST00000582448 LINC00587B1AMM8 73 aa7.06□□□□□ -1.28
SS18-221ENST00000582448 NMUP48645 174 aa7.06□□□□□ -1.28
SS18-221ENST00000582448 MRPS36P82909 103 aaKnown RBP7.06□□□□□ -1.28
SS18-221ENST00000582448 C12orf74Q32Q52 190 aa7.06□□□□□ -1.28
SS18-221ENST00000582448 LCE1AQ5T7P2 110 aa7.06□□□□□ -1.28
SS18-221ENST00000582448 ZC2HC1BQ5TFG8 222 aa7.06□□□□□ -1.28
SS18-221ENST00000582448 CHCHD5Q9BSY4 110 aa7.06□□□□□ -1.28
SS18-221ENST00000582448 TRAV26-1A0A087WT03 109 aa7.05□□□□□ -1.28
SS18-221ENST00000582448 FGF6P10767 208 aa7.05□□□□□ -1.28
SS18-221ENST00000582448 ZNF25P17030 456 aaPredicted RBP7.05□□□□□ -1.28
SS18-221ENST00000582448 MRPL23Q16540 153 aaKnown RBP7.05□□□□□ -1.28
SS18-221ENST00000582448 MRPL52Q86TS9 123 aaKnown RBP7.05□□□□□ -1.28
SS18-221ENST00000582448 CSDC2Q9Y534 153 aaKnown RBP7.05□□□□□ -1.28
SS18-221ENST00000582448 ICOSQ9Y6W8 199 aa7.05□□□□□ -1.28
SS18-221ENST00000582448 ABCA13Q86UQ4 5058 aa7.05□□□□□ -1.28
SS18-221ENST00000582448 DNAH17Q9UFH2 4485 aa7.04□□□□□ -1.28
SS18-221ENST00000582448 A0A0J9YY99 117 aa7.04□□□□□ -1.28
SS18-221ENST00000582448 LINC00694P0DN24 101 aa7.04□□□□□ -1.28
SS18-221ENST00000582448 COX8AP10176 69 aa7.04□□□□□ -1.28
SS18-221ENST00000582448 SEC11AP67812 179 aa7.04□□□□□ -1.28
SS18-221ENST00000582448 TMEM170BQ5T4T1 132 aa7.04□□□□□ -1.28
SS18-221ENST00000582448 NTM-AS1Q6ZSK4 140 aa7.04□□□□□ -1.28
SS18-221ENST00000582448 OPRPNQ99935 248 aaPredicted RBP7.04□□□□□ -1.28
SS18-221ENST00000582448 CHAC1Q9BUX1 264 aa7.04□□□□□ -1.28
SS18-221ENST00000582448 DYNC1H1Q14204 4646 aaKnown RBP7.04□□□□□ -1.28
SS18-221ENST00000582448 C11orf86A6NJI1 115 aa7.03□□□□□ -1.28
SS18-221ENST00000582448 C16orf90A8MZG2 172 aa7.03□□□□□ -1.28
SS18-221ENST00000582448 NFE4Q86UQ8 179 aa7.03□□□□□ -1.28
SS18-221ENST00000582448 MAPKAPK5-AS1Q8N8E1 139 aa7.03□□□□□ -1.28
SS18-221ENST00000582448 AMELXQ99217 191 aa7.03□□□□□ -1.28
SS18-221ENST00000582448 GEMIN7Q9H840 131 aaKnown RBP7.03□□□□□ -1.28
SS18-221ENST00000582448 MRPS16Q9Y3D3 137 aaKnown RBP7.03□□□□□ -1.28
SS18-221ENST00000582448 IGLV4-69A0A075B6H9 119 aa7.02□□□□□ -1.29
SS18-221ENST00000582448 H3BRM9 83 aa7.02□□□□□ -1.29
SS18-221ENST00000582448 M0R143 59 aa7.02□□□□□ -1.29
SS18-221ENST00000582448 DLEU1O43261 78 aa7.02□□□□□ -1.29
SS18-221ENST00000582448 IGKV2-30P06310 120 aa7.02□□□□□ -1.29
SS18-221ENST00000582448 C1orf134Q5TEV5 83 aa7.02□□□□□ -1.29
SS18-221ENST00000582448 Q6ZUT4 128 aa7.02□□□□□ -1.29
SS18-221ENST00000582448 DNAH11Q96DT5 4516 aa7.01□□□□□ -1.29
SS18-221ENST00000582448 TINCRA0A1B0GVN0 87 aa7.01□□□□□ -1.29
SS18-221ENST00000582448 TMEM262E9PQX1 116 aa7.01□□□□□ -1.29
SS18-221ENST00000582448 H3BNG1 76 aa7.01□□□□□ -1.29
SS18-221ENST00000582448 SIVA1O15304 175 aa7.01□□□□□ -1.29
SS18-221ENST00000582448 CTAG1AP78358 180 aa7.01□□□□□ -1.29
SS18-221ENST00000582448 GAGE6Q13070 117 aa7.01□□□□□ -1.29
SS18-221ENST00000582448 BOD1L2Q8IYS8 172 aa7.01□□□□□ -1.29
SS18-221ENST00000582448 VSIG2Q96IQ7 327 aa7.01□□□□□ -1.29
SS18-221ENST00000582448 A0A096LPF7 62 aa7□□□□□ -1.29
SS18-221ENST00000582448 TRAV8-6A0A0B4J262 113 aa7□□□□□ -1.29
SS18-221ENST00000582448 A0A0J9YXV3 536 aa7□□□□□ -1.29
SS18-221ENST00000582448 E9PLD3 99 aa7□□□□□ -1.29
SS18-221ENST00000582448 HERVK_113P63121 156 aa7□□□□□ -1.29
SS18-221ENST00000582448 LBHQ53QV2 105 aaPredicted RBP7□□□□□ -1.29
SS18-221ENST00000582448 RNASE13Q5GAN3 156 aaKnown RBP7□□□□□ -1.29
SS18-221ENST00000582448 Q6ZR54 194 aa7□□□□□ -1.29
SS18-221ENST00000582448 CDC42SE2Q9NRR3 84 aa7□□□□□ -1.29
SS18-221ENST00000582448 NACAE9PAV3 2078 aa7□□□□□ -1.29
SS18-221ENST00000582448 LGALS3P17931 250 aaKnown RBP6.99□□□□□ -1.29
SS18-221ENST00000582448 LINC00469Q8N7U9 141 aa6.99□□□□□ -1.29
SS18-221ENST00000582448 PLEKHB2Q96CS7 222 aa6.99□□□□□ -1.29
SS18-221ENST00000582448 PKD1P98161 4303 aa6.98□□□□□ -1.29
SS18-221ENST00000582448 UBE2D1P51668 147 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms