RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 RMI2Q96E14 147 aa6.34□□□□□ -1.39
RFFL-210ENST00000582308 IGLV4-69A0A075B6H9 119 aa6.33□□□□□ -1.4
RFFL-210ENST00000582308 IGHV3OR16-9A0A0B4J2B5 98 aa6.33□□□□□ -1.4
RFFL-210ENST00000582308 KRTDAPP60985 99 aa6.33□□□□□ -1.4
RFFL-210ENST00000582308 CD164L2Q6UWJ8 174 aa6.33□□□□□ -1.4
RFFL-210ENST00000582308 TM2D2Q9BX73 214 aa6.33□□□□□ -1.4
RFFL-210ENST00000582308 CHTOPQ9Y3Y2 248 aaKnown RBP6.33□□□□□ -1.4
RFFL-210ENST00000582308 RYR2Q92736 4967 aa6.33□□□□□ -1.4
RFFL-210ENST00000582308 TINCRA0A1B0GVN0 87 aa6.32□□□□□ -1.4
RFFL-210ENST00000582308 RTL8CO15255 209 aa6.32□□□□□ -1.4
RFFL-210ENST00000582308 IGLC3P0DOY3 106 aa6.32□□□□□ -1.4
RFFL-210ENST00000582308 MRPL35Q9NZE8 188 aaKnown RBP6.32□□□□□ -1.4
RFFL-210ENST00000582308 COX11Q9Y6N1 276 aa6.32□□□□□ -1.4
RFFL-210ENST00000582308 C11orf86A6NJI1 115 aa6.31□□□□□ -1.4
RFFL-210ENST00000582308 F8VRH5 84 aa6.31□□□□□ -1.4
RFFL-210ENST00000582308 HERVK_113P63121 156 aa6.31□□□□□ -1.4
RFFL-210ENST00000582308 SEC11AP67812 179 aa6.31□□□□□ -1.4
RFFL-210ENST00000582308 LINC01545Q5VT33 79 aa6.31□□□□□ -1.4
RFFL-210ENST00000582308 PET117Q6UWS5 81 aa6.31□□□□□ -1.4
RFFL-210ENST00000582308 C5orf38Q86SI9 138 aa6.31□□□□□ -1.4
RFFL-210ENST00000582308 OR10D4PQ8NGN7 298 aa6.31□□□□□ -1.4
RFFL-210ENST00000582308 PMCHL2Q9BQD1 86 aa6.31□□□□□ -1.4
RFFL-210ENST00000582308 GEMIN7Q9H840 131 aaKnown RBP6.31□□□□□ -1.4
RFFL-210ENST00000582308 IGLV5-45A0A087WSX0 123 aa6.3□□□□□ -1.4
RFFL-210ENST00000582308 COX7A2LO14548 114 aa6.3□□□□□ -1.4
RFFL-210ENST00000582308 PSCAO43653 123 aa6.3□□□□□ -1.4
RFFL-210ENST00000582308 CHAC1Q9BUX1 264 aa6.3□□□□□ -1.4
RFFL-210ENST00000582308 CDKN2A-AS1Q9UH64 79 aa6.3□□□□□ -1.4
RFFL-210ENST00000582308 FAT2Q9NYQ8 4349 aa6.3□□□□□ -1.4
RFFL-210ENST00000582308 A0A087WZ39 114 aa6.29□□□□□ -1.4
RFFL-210ENST00000582308 LRCOL1A6NCL2 159 aa6.29□□□□□ -1.4
RFFL-210ENST00000582308 LECT2O14960 151 aa6.29□□□□□ -1.4
RFFL-210ENST00000582308 DPM2O94777 84 aa6.29□□□□□ -1.4
RFFL-210ENST00000582308 ZNF22P17026 224 aaPredicted RBP6.29□□□□□ -1.4
RFFL-210ENST00000582308 WFDC2Q14508 124 aa6.29□□□□□ -1.4
RFFL-210ENST00000582308 LINC00469Q8N7U9 141 aa6.29□□□□□ -1.4
RFFL-210ENST00000582308 USP17L23D6RBM5 183 aa6.28□□□□□ -1.4
RFFL-210ENST00000582308 TNP2Q05952 138 aa6.28□□□□□ -1.4
RFFL-210ENST00000582308 LINC01561Q8N1V8 128 aa6.28□□□□□ -1.4
RFFL-210ENST00000582308 C15orf56Q8N910 161 aa6.28□□□□□ -1.4
RFFL-210ENST00000582308 DNAH11Q96DT5 4516 aa6.27□□□□□ -1.41
RFFL-210ENST00000582308 IGKCP01834 107 aa6.27□□□□□ -1.41
RFFL-210ENST00000582308 SPINK8P0C7L1 97 aa6.27□□□□□ -1.41
RFFL-210ENST00000582308 MALP21145 153 aa6.27□□□□□ -1.41
RFFL-210ENST00000582308 PLNP26678 52 aa6.27□□□□□ -1.41
RFFL-210ENST00000582308 TMEM170BQ5T4T1 132 aa6.27□□□□□ -1.41
RFFL-210ENST00000582308 PKD1P98161 4303 aa6.26□□□□□ -1.41
RFFL-210ENST00000582308 IGHV3-64A0A075B6Q5 118 aa6.26□□□□□ -1.41
RFFL-210ENST00000582308 A0A087WTM6 91 aa6.26□□□□□ -1.41
RFFL-210ENST00000582308 IGHV1-58A0A0C4DH39 117 aa6.26□□□□□ -1.41
RFFL-210ENST00000582308 C20orf202A1L168 122 aa6.26□□□□□ -1.41
RFFL-210ENST00000582308 SMIM1B2RUZ4 78 aa6.26□□□□□ -1.41
RFFL-210ENST00000582308 HECTD4Q9Y4D8 3996 aa6.25□□□□□ -1.41
RFFL-210ENST00000582308 RYR3Q15413 4870 aa6.25□□□□□ -1.41
RFFL-210ENST00000582308 GVQW2A0A096LPI5 108 aaPredicted RBP6.25□□□□□ -1.41
RFFL-210ENST00000582308 IGLV5-39A0A0G2JS06 123 aa6.25□□□□□ -1.41
RFFL-210ENST00000582308 TMEM223A0PJW6 202 aa6.25□□□□□ -1.41
RFFL-210ENST00000582308 H3BRM9 83 aa6.25□□□□□ -1.41
RFFL-210ENST00000582308 HIGD2BQ4VC39 106 aa6.25□□□□□ -1.41
RFFL-210ENST00000582308 CFAP161Q6P656 301 aa6.25□□□□□ -1.41
RFFL-210ENST00000582308 ATOH7Q8N100 152 aa6.25□□□□□ -1.41
RFFL-210ENST00000582308 ORAOV1Q8WV07 137 aa6.25□□□□□ -1.41
RFFL-210ENST00000582308 LINC00526Q96FQ7 95 aa6.25□□□□□ -1.41
RFFL-210ENST00000582308 APOMO95445 188 aa6.24□□□□□ -1.41
RFFL-210ENST00000582308 SCGB1D1O95968 90 aa6.24□□□□□ -1.41
RFFL-210ENST00000582308 KIAA0087Q14695 138 aa6.24□□□□□ -1.41
RFFL-210ENST00000582308 JOSD1Q15040 202 aaPredicted RBP6.24□□□□□ -1.41
RFFL-210ENST00000582308 LINC00336Q6ZUF6 198 aa6.24□□□□□ -1.41
RFFL-210ENST00000582308 LOC105371267A0A1B0GV96 52 aa6.23□□□□□ -1.41
RFFL-210ENST00000582308 hDV102S1A0JD36 115 aa6.23□□□□□ -1.41
RFFL-210ENST00000582308 SLPIP03973 132 aa6.23□□□□□ -1.41
RFFL-210ENST00000582308 SPAG11BQ08648 103 aa6.23□□□□□ -1.41
RFFL-210ENST00000582308 C14orf177Q52M58 125 aa6.23□□□□□ -1.41
RFFL-210ENST00000582308 STPG4Q8N801 248 aa6.23□□□□□ -1.41
RFFL-210ENST00000582308 Q8N814 137 aa6.23□□□□□ -1.41
RFFL-210ENST00000582308 ZNF561-AS1K7EIQ3 104 aa6.22□□□□□ -1.41
RFFL-210ENST00000582308 AKR1D1P51857 326 aa6.22□□□□□ -1.41
RFFL-210ENST00000582308 MAJINQ3KP22 176 aa6.22□□□□□ -1.41
RFFL-210ENST00000582308 PYY3Q5JQD4 70 aa6.22□□□□□ -1.41
RFFL-210ENST00000582308 COX7B2Q8TF08 81 aa6.22□□□□□ -1.41
RFFL-210ENST00000582308 NTN5Q8WTR8 489 aaPredicted RBP6.22□□□□□ -1.41
RFFL-210ENST00000582308 TOMM7Q9P0U1 55 aa6.22□□□□□ -1.41
RFFL-210ENST00000582308 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.21□□□□□ -1.42
RFFL-210ENST00000582308 EREGO14944 169 aa6.21□□□□□ -1.42
RFFL-210ENST00000582308 FUSP35637 526 aaKnown RBP eCLIP6.21□□□□□ -1.42
RFFL-210ENST00000582308 TSPEAR-AS2P59090 65 aa6.21□□□□□ -1.42
RFFL-210ENST00000582308 HERVK_113P61574 105 aa6.21□□□□□ -1.42
RFFL-210ENST00000582308 C2orf82Q6UX34 121 aa6.21□□□□□ -1.42
RFFL-210ENST00000582308 Q8IZM0 81 aa6.21□□□□□ -1.42
RFFL-210ENST00000582308 IGKV2D-26A0A0A0MRZ7 120 aa6.2□□□□□ -1.42
RFFL-210ENST00000582308 E9PLD3 99 aa6.2□□□□□ -1.42
RFFL-210ENST00000582308 LEPROTO15243 131 aa6.2□□□□□ -1.42
RFFL-210ENST00000582308 PRSS2P07478 247 aa6.2□□□□□ -1.42
RFFL-210ENST00000582308 ANKRD39Q53RE8 183 aa6.2□□□□□ -1.42
RFFL-210ENST00000582308 C6orf226Q5I0X4 101 aa6.2□□□□□ -1.42
RFFL-210ENST00000582308 C10orf25Q5T742 122 aa6.2□□□□□ -1.42
RFFL-210ENST00000582308 UNQ6190/PRO20217Q6UXQ8 127 aa6.2□□□□□ -1.42
RFFL-210ENST00000582308 C2orf48Q96LS8 159 aa6.2□□□□□ -1.42
RFFL-210ENST00000582308 A0A1B0GVY2 172 aa6.19□□□□□ -1.42
RFFL-210ENST00000582308 KRTAP10-2P60368 255 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms