RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 SYCNQ0VAF6 134 aa5.44□□□□□ -1.54
NUP85-217ENST00000581335 SRSF9Q13242 221 aaKnown RBP eCLIP5.44□□□□□ -1.54
NUP85-217ENST00000581335 REG3GQ6UW15 175 aa5.44□□□□□ -1.54
NUP85-217ENST00000581335 Q6ZRP5 223 aa5.44□□□□□ -1.54
NUP85-217ENST00000581335 KRTAP4-9Q9BYQ8 210 aa5.44□□□□□ -1.54
NUP85-217ENST00000581335 KRTAP4-2Q9BYR5 136 aa5.44□□□□□ -1.54
NUP85-217ENST00000581335 TMEM191AQ9H0A3 160 aa5.44□□□□□ -1.54
NUP85-217ENST00000581335 TRBV27A0A0K0K1C4 114 aa5.43□□□□□ -1.54
NUP85-217ENST00000581335 A0A1B0GUT8 65 aa5.43□□□□□ -1.54
NUP85-217ENST00000581335 C7orf77A4D0Y5 90 aa5.43□□□□□ -1.54
NUP85-217ENST00000581335 HIGD1CA8MV81 97 aa5.43□□□□□ -1.54
NUP85-217ENST00000581335 CEBPGP53567 150 aa5.43□□□□□ -1.54
NUP85-217ENST00000581335 LBHQ53QV2 105 aaPredicted RBP5.43□□□□□ -1.54
NUP85-217ENST00000581335 TSKUQ8WUA8 353 aa5.43□□□□□ -1.54
NUP85-217ENST00000581335 ISOC2Q96AB3 205 aa5.43□□□□□ -1.54
NUP85-217ENST00000581335 IGLV4-69A0A075B6H9 119 aa5.42□□□□□ -1.54
NUP85-217ENST00000581335 LOC107984640A0A0U1RRK4 108 aa5.42□□□□□ -1.54
NUP85-217ENST00000581335 C1orf196B1AJZ1 125 aa5.42□□□□□ -1.54
NUP85-217ENST00000581335 ALKAL2Q6UX46 152 aa5.42□□□□□ -1.54
NUP85-217ENST00000581335 AMN1Q8IY45 258 aa5.42□□□□□ -1.54
NUP85-217ENST00000581335 CSDC2Q9Y534 153 aaKnown RBP5.42□□□□□ -1.54
NUP85-217ENST00000581335 SMAGPQ0VAQ4 97 aa5.41□□□□□ -1.54
NUP85-217ENST00000581335 LINC01551Q86U37 167 aa5.41□□□□□ -1.54
NUP85-217ENST00000581335 PRR26Q8N8Z3 221 aa5.41□□□□□ -1.54
NUP85-217ENST00000581335 NUP35Q8NFH5 326 aa5.41□□□□□ -1.54
NUP85-217ENST00000581335 SMIM7Q9BQ49 75 aa5.41□□□□□ -1.54
NUP85-217ENST00000581335 OSTCQ9NRP0 149 aa5.41□□□□□ -1.54
NUP85-217ENST00000581335 UBE2D4Q9Y2X8 147 aa5.41□□□□□ -1.54
NUP85-217ENST00000581335 A0A1W2PNN7 141 aa5.4□□□□□ -1.54
NUP85-217ENST00000581335 ZNF727A8MUV8 499 aa5.4□□□□□ -1.54
NUP85-217ENST00000581335 SMKR1H3BMG3 65 aa5.4□□□□□ -1.54
NUP85-217ENST00000581335 COX7A2LO14548 114 aa5.4□□□□□ -1.54
NUP85-217ENST00000581335 PPP1R17O96001 155 aa5.4□□□□□ -1.54
NUP85-217ENST00000581335 FCER1GP30273 86 aa5.4□□□□□ -1.54
NUP85-217ENST00000581335 RIGQ13278 110 aa5.4□□□□□ -1.54
NUP85-217ENST00000581335 CAMK2N2Q96S95 79 aa5.4□□□□□ -1.54
NUP85-217ENST00000581335 EIF5A2Q9GZV4 153 aaKnown RBP5.4□□□□□ -1.54
NUP85-217ENST00000581335 LRP2P98164 4655 aa5.39□□□□□ -1.55
NUP85-217ENST00000581335 APOMO95445 188 aa5.39□□□□□ -1.55
NUP85-217ENST00000581335 SRP19P09132 144 aaKnown RBP5.39□□□□□ -1.55
NUP85-217ENST00000581335 RNASE13Q5GAN3 156 aaKnown RBP5.39□□□□□ -1.55
NUP85-217ENST00000581335 NRACQ8N912 160 aa5.39□□□□□ -1.55
NUP85-217ENST00000581335 C2orf48Q96LS8 159 aa5.39□□□□□ -1.55
NUP85-217ENST00000581335 KIR2DL4Q99706 377 aa5.39□□□□□ -1.55
NUP85-217ENST00000581335 V9GYV3 84 aa5.39□□□□□ -1.55
NUP85-217ENST00000581335 RNF213Q63HN8 5207 aa5.38□□□□□ -1.55
NUP85-217ENST00000581335 TRAV13-1A0A0B4J241 112 aa5.38□□□□□ -1.55
NUP85-217ENST00000581335 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.38□□□□□ -1.55
NUP85-217ENST00000581335 PPP1R2P9O14990 202 aa5.38□□□□□ -1.55
NUP85-217ENST00000581335 MRPL51Q4U2R6 128 aaKnown RBP5.38□□□□□ -1.55
NUP85-217ENST00000581335 C9orf116Q5BN46 136 aaPredicted RBP5.38□□□□□ -1.55
NUP85-217ENST00000581335 C5orf38Q86SI9 138 aa5.38□□□□□ -1.55
NUP85-217ENST00000581335 TIMM21Q9BVV7 248 aa5.38□□□□□ -1.55
NUP85-217ENST00000581335 PSORS1C2Q9UIG4 136 aa5.38□□□□□ -1.55
NUP85-217ENST00000581335 LINC00862A6NCI5 91 aa5.37□□□□□ -1.55
NUP85-217ENST00000581335 RPL18AQ02543 176 aaKnown RBP5.37□□□□□ -1.55
NUP85-217ENST00000581335 FAM104BQ5XKR9 115 aa5.37□□□□□ -1.55
NUP85-217ENST00000581335 Q6ZUT4 128 aa5.37□□□□□ -1.55
NUP85-217ENST00000581335 AKAP14Q86UN6 197 aa5.37□□□□□ -1.55
NUP85-217ENST00000581335 OPRPNQ99935 248 aaPredicted RBP5.37□□□□□ -1.55
NUP85-217ENST00000581335 NAT8BQ9UHF3 227 aa5.37□□□□□ -1.55
NUP85-217ENST00000581335 TRBV24-1A0A075B6N3 115 aa5.36□□□□□ -1.55
NUP85-217ENST00000581335 TCAPO15273 167 aa5.36□□□□□ -1.55
NUP85-217ENST00000581335 MT-ND6P03923 174 aa5.36□□□□□ -1.55
NUP85-217ENST00000581335 SPAG11BQ08648 103 aa5.36□□□□□ -1.55
NUP85-217ENST00000581335 TMEM241Q24JQ0 296 aa5.36□□□□□ -1.55
NUP85-217ENST00000581335 FAM74A3Q4VXF1 159 aa5.36□□□□□ -1.55
NUP85-217ENST00000581335 C1orf137Q5JT78 98 aa5.36□□□□□ -1.55
NUP85-217ENST00000581335 PHF5AQ7RTV0 110 aaKnown RBP5.36□□□□□ -1.55
NUP85-217ENST00000581335 OR10D4PQ8NGN7 298 aa5.36□□□□□ -1.55
NUP85-217ENST00000581335 C20orf78Q9BR46 151 aa5.36□□□□□ -1.55
NUP85-217ENST00000581335 SMIM27A0A1W2PRY6 76 aa5.35□□□□□ -1.55
NUP85-217ENST00000581335 F8WDY8 70 aa5.35□□□□□ -1.55
NUP85-217ENST00000581335 RPL23P62829 140 aaKnown RBP5.35□□□□□ -1.55
NUP85-217ENST00000581335 RPL32P62910 135 aaKnown RBP5.35□□□□□ -1.55
NUP85-217ENST00000581335 FAM104AQ969W3 186 aa5.35□□□□□ -1.55
NUP85-217ENST00000581335 MRPL35Q9NZE8 188 aaKnown RBP5.35□□□□□ -1.55
NUP85-217ENST00000581335 IGHV3OR16-9A0A0B4J2B5 98 aa5.34□□□□□ -1.55
NUP85-217ENST00000581335 A0A1B0GW15 77 aa5.34□□□□□ -1.55
NUP85-217ENST00000581335 CKS2P33552 79 aa5.34□□□□□ -1.55
NUP85-217ENST00000581335 RPL39P62891 51 aaKnown RBP5.34□□□□□ -1.55
NUP85-217ENST00000581335 ADIRFQ15847 76 aa5.34□□□□□ -1.55
NUP85-217ENST00000581335 ORAOV1Q8WV07 137 aa5.34□□□□□ -1.55
NUP85-217ENST00000581335 IMMP2LQ96T52 175 aa5.34□□□□□ -1.55
NUP85-217ENST00000581335 KRTAP9-3Q9BYQ3 159 aa5.34□□□□□ -1.55
NUP85-217ENST00000581335 NDUFA1O15239 70 aa5.33□□□□□ -1.56
NUP85-217ENST00000581335 IGLV7-43P04211 117 aa5.33□□□□□ -1.56
NUP85-217ENST00000581335 TLX1NBP0CAT3 122 aa5.33□□□□□ -1.56
NUP85-217ENST00000581335 MRPS36P82909 103 aaKnown RBP5.33□□□□□ -1.56
NUP85-217ENST00000581335 SPANXA1Q9NS26 97 aa5.33□□□□□ -1.56
NUP85-217ENST00000581335 NAT8Q9UHE5 227 aa5.33□□□□□ -1.56
NUP85-217ENST00000581335 C9JQL5 133 aa5.32□□□□□ -1.56
NUP85-217ENST00000581335 HBBP68871 147 aa5.32□□□□□ -1.56
NUP85-217ENST00000581335 UNQ6190/PRO20217Q6UXQ8 127 aa5.32□□□□□ -1.56
NUP85-217ENST00000581335 DIRC1Q969H9 104 aa5.32□□□□□ -1.56
NUP85-217ENST00000581335 SMIM2Q9BVW6 85 aa5.32□□□□□ -1.56
NUP85-217ENST00000581335 A0A087WZ39 114 aa5.31□□□□□ -1.56
NUP85-217ENST00000581335 FAM168BA1KXE4 195 aa5.31□□□□□ -1.56
NUP85-217ENST00000581335 IFITM10A6NMD0 228 aa5.31□□□□□ -1.56
NUP85-217ENST00000581335 D6R8Y8 96 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms