RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 COX6A2Q02221 97 aa12.09□□□□□ -0.47
CDKN2A-213ENST00000579122 COTL1Q14019 142 aa12.09□□□□□ -0.47
CDKN2A-213ENST00000579122 Q8N8P6 123 aa12.09□□□□□ -0.47
CDKN2A-213ENST00000579122 LINC01600Q96MT4 127 aa12.09□□□□□ -0.47
CDKN2A-213ENST00000579122 NXT2Q9NPJ8 142 aaKnown RBP12.09□□□□□ -0.47
CDKN2A-213ENST00000579122 I3L3M4 83 aa12.08□□□□□ -0.48
CDKN2A-213ENST00000579122 NDUFA6P56556 154 aa12.07□□□□□ -0.48
CDKN2A-213ENST00000579122 FA2HQ7L5A8 372 aa12.07□□□□□ -0.48
CDKN2A-213ENST00000579122 TCAPO15273 167 aa12.06□□□□□ -0.48
CDKN2A-213ENST00000579122 LINC00614P0C842 121 aa12.06□□□□□ -0.48
CDKN2A-213ENST00000579122 PRR3P79522 188 aaKnown RBP12.06□□□□□ -0.48
CDKN2A-213ENST00000579122 MAJINQ3KP22 176 aa12.06□□□□□ -0.48
CDKN2A-213ENST00000579122 URB1-AS1Q96HZ7 61 aa12.06□□□□□ -0.48
CDKN2A-213ENST00000579122 KIR2DL4Q99706 377 aa12.06□□□□□ -0.48
CDKN2A-213ENST00000579122 TSHBP01222 138 aa12.05□□□□□ -0.48
CDKN2A-213ENST00000579122 HIGD2BQ4VC39 106 aa12.05□□□□□ -0.48
CDKN2A-213ENST00000579122 RNASEKQ6P5S7 137 aaKnown RBP12.05□□□□□ -0.48
CDKN2A-213ENST00000579122 TMA7Q9Y2S6 64 aaKnown RBP12.05□□□□□ -0.48
CDKN2A-213ENST00000579122 IGKV2-24A0A0C4DH68 120 aa12.04□□□□□ -0.48
CDKN2A-213ENST00000579122 SERF1AO75920 110 aa12.04□□□□□ -0.48
CDKN2A-213ENST00000579122 FCER1GP30273 86 aa12.04□□□□□ -0.48
CDKN2A-213ENST00000579122 STPG4Q8N801 248 aa12.04□□□□□ -0.48
CDKN2A-213ENST00000579122 GVQW2A0A096LPI5 108 aaPredicted RBP12.03□□□□□ -0.48
CDKN2A-213ENST00000579122 IGKV3OR2-268A0A0C4DH90 116 aa12.03□□□□□ -0.48
CDKN2A-213ENST00000579122 LINC01546A6NGU7 62 aa12.03□□□□□ -0.48
CDKN2A-213ENST00000579122 CHCHD10Q8WYQ3 142 aaPredicted RBP12.03□□□□□ -0.48
CDKN2A-213ENST00000579122 CHCHD1Q96BP2 118 aaKnown RBP12.03□□□□□ -0.48
CDKN2A-213ENST00000579122 LINC00310P59036 64 aa12.02□□□□□ -0.49
CDKN2A-213ENST00000579122 COA6Q5JTJ3 125 aaKnown RBP12.02□□□□□ -0.49
CDKN2A-213ENST00000579122 K7EMI3 77 aa12.01□□□□□ -0.49
CDKN2A-213ENST00000579122 NUPR1O60356 82 aa12.01□□□□□ -0.49
CDKN2A-213ENST00000579122 S100A6P06703 90 aa12.01□□□□□ -0.49
CDKN2A-213ENST00000579122 AMMECR1LQ6DCA0 310 aa12.01□□□□□ -0.49
CDKN2A-213ENST00000579122 A0A0J9YXV3 536 aa12□□□□□ -0.49
CDKN2A-213ENST00000579122 H7C423 109 aa12□□□□□ -0.49
CDKN2A-213ENST00000579122 ORMDL2Q53FV1 153 aa12□□□□□ -0.49
CDKN2A-213ENST00000579122 A0A096LNI7 61 aa11.99□□□□□ -0.49
CDKN2A-213ENST00000579122 SPINK6Q6UWN8 80 aa11.99□□□□□ -0.49
CDKN2A-213ENST00000579122 LINC00474Q9P2X8 69 aa11.99□□□□□ -0.49
CDKN2A-213ENST00000579122 HSBP1O75506 76 aa11.98□□□□□ -0.49
CDKN2A-213ENST00000579122 KRTAP10-8P60410 259 aa11.98□□□□□ -0.49
CDKN2A-213ENST00000579122 FOXI1Q12951 378 aa11.98□□□□□ -0.49
CDKN2A-213ENST00000579122 PKIGQ9Y2B9 76 aa11.98□□□□□ -0.49
CDKN2A-213ENST00000579122 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.97□□□□□ -0.49
CDKN2A-213ENST00000579122 IGKV2-29A2NJV5 120 aaPredicted RBP11.97□□□□□ -0.49
CDKN2A-213ENST00000579122 ESDP10768 282 aa11.97□□□□□ -0.49
CDKN2A-213ENST00000579122 ODF1Q14990 250 aa11.97□□□□□ -0.49
CDKN2A-213ENST00000579122 PMCHL1Q16048 86 aa11.97□□□□□ -0.49
CDKN2A-213ENST00000579122 REG3GQ6UW15 175 aa11.97□□□□□ -0.49
CDKN2A-213ENST00000579122 FGF6P10767 208 aa11.96□□□□□ -0.49
CDKN2A-213ENST00000579122 SNRPEP62304 92 aaKnown RBP11.96□□□□□ -0.49
CDKN2A-213ENST00000579122 FAM19A2Q8N3H0 131 aa11.96□□□□□ -0.49
CDKN2A-213ENST00000579122 KRTAP3-3Q9BYR6 98 aa11.96□□□□□ -0.49
CDKN2A-213ENST00000579122 KRTAP3-2Q9BYR7 98 aa11.96□□□□□ -0.49
CDKN2A-213ENST00000579122 ZNF25P17030 456 aaPredicted RBP11.95□□□□□ -0.5
CDKN2A-213ENST00000579122 G0S2P27469 103 aa11.95□□□□□ -0.5
CDKN2A-213ENST00000579122 OR5A1Q8NGJ0 315 aa11.95□□□□□ -0.5
CDKN2A-213ENST00000579122 A0A096LNJ9 63 aa11.94□□□□□ -0.5
CDKN2A-213ENST00000579122 HBDP02042 147 aa11.94□□□□□ -0.5
CDKN2A-213ENST00000579122 IGHV1-58A0A0C4DH39 117 aa11.93□□□□□ -0.5
CDKN2A-213ENST00000579122 C5orf52A6NGY3 159 aa11.93□□□□□ -0.5
CDKN2A-213ENST00000579122 XCL1P47992 114 aa11.93□□□□□ -0.5
CDKN2A-213ENST00000579122 RPL39P62891 51 aaKnown RBP11.93□□□□□ -0.5
CDKN2A-213ENST00000579122 SRSF9Q13242 221 aaKnown RBP eCLIP11.93□□□□□ -0.5
CDKN2A-213ENST00000579122 PDZD11Q5EBL8 140 aa11.93□□□□□ -0.5
CDKN2A-213ENST00000579122 C2orf66Q6UXQ4 117 aa11.93□□□□□ -0.5
CDKN2A-213ENST00000579122 TMEM18Q96B42 140 aa11.93□□□□□ -0.5
CDKN2A-213ENST00000579122 CYSLTR1Q9Y271 337 aa11.93□□□□□ -0.5
CDKN2A-213ENST00000579122 Q6ZRP5 223 aa11.92□□□□□ -0.5
CDKN2A-213ENST00000579122 HIST3H2BBQ8N257 126 aa11.92□□□□□ -0.5
CDKN2A-213ENST00000579122 TOMM6Q96B49 74 aa11.92□□□□□ -0.5
CDKN2A-213ENST00000579122 TMEM101Q96IK0 257 aa11.92□□□□□ -0.5
CDKN2A-213ENST00000579122 CARD19Q96LW7 228 aa11.92□□□□□ -0.5
CDKN2A-213ENST00000579122 LINC00959A0A1B0GUT2 108 aa11.91□□□□□ -0.5
CDKN2A-213ENST00000579122 CCL25O15444 150 aa11.9□□□□□ -0.5
CDKN2A-213ENST00000579122 LINC00526Q96FQ7 95 aa11.9□□□□□ -0.5
CDKN2A-213ENST00000579122 LINC01549A6NIU2 74 aa11.89□□□□□ -0.51
CDKN2A-213ENST00000579122 S100A2P29034 98 aa11.89□□□□□ -0.51
CDKN2A-213ENST00000579122 SCGB3A1Q96QR1 104 aa11.89□□□□□ -0.51
CDKN2A-213ENST00000579122 FABP4P15090 132 aa11.88□□□□□ -0.51
CDKN2A-213ENST00000579122 SYCNQ0VAF6 134 aa11.88□□□□□ -0.51
CDKN2A-213ENST00000579122 UBE2D4Q9Y2X8 147 aa11.88□□□□□ -0.51
CDKN2A-213ENST00000579122 IGIPA6NJ69 53 aa11.87□□□□□ -0.51
CDKN2A-213ENST00000579122 ZNF561-AS1K7EIQ3 104 aa11.87□□□□□ -0.51
CDKN2A-213ENST00000579122 LEPROTL1O95214 131 aa11.87□□□□□ -0.51
CDKN2A-213ENST00000579122 SMAGPQ0VAQ4 97 aa11.87□□□□□ -0.51
CDKN2A-213ENST00000579122 SS18Q15532 418 aa11.87□□□□□ -0.51
CDKN2A-213ENST00000579122 ERASQ7Z444 233 aa11.87□□□□□ -0.51
CDKN2A-213ENST00000579122 MRPL52Q86TS9 123 aaKnown RBP11.87□□□□□ -0.51
CDKN2A-213ENST00000579122 PACRGQ96M98 296 aaPredicted RBP11.87□□□□□ -0.51
CDKN2A-213ENST00000579122 TIMM21Q9BVV7 248 aa11.87□□□□□ -0.51
CDKN2A-213ENST00000579122 SPANXA1Q9NS26 97 aa11.87□□□□□ -0.51
CDKN2A-213ENST00000579122 PYGO1Q9Y3Y4 419 aa11.87□□□□□ -0.51
CDKN2A-213ENST00000579122 IFITM10A6NMD0 228 aa11.86□□□□□ -0.51
CDKN2A-213ENST00000579122 PTTG1IPP53801 180 aa11.86□□□□□ -0.51
CDKN2A-213ENST00000579122 CD164L2Q6UWJ8 174 aa11.86□□□□□ -0.51
CDKN2A-213ENST00000579122 LINC00173Q6ZV60 143 aa11.86□□□□□ -0.51
CDKN2A-213ENST00000579122 TMEM141Q96I45 108 aa11.86□□□□□ -0.51
CDKN2A-213ENST00000579122 HIST1H2BLQ99880 126 aa11.86□□□□□ -0.51
CDKN2A-213ENST00000579122 HSPB8Q9UJY1 196 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms