RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 Q6ZRU5 148 aa9.79□□□□□ -0.84
SF3B3-215ENST00000577085 CTDSP1Q9GZU7 261 aa9.79□□□□□ -0.84
SF3B3-215ENST00000577085 TGIF2-C20orf24A0A0A6YYL0 155 aa9.78□□□□□ -0.84
SF3B3-215ENST00000577085 UQCC3Q6UW78 93 aa9.78□□□□□ -0.84
SF3B3-215ENST00000577085 OR10D4PQ8NGN7 298 aa9.78□□□□□ -0.84
SF3B3-215ENST00000577085 ORAOV1Q8WV07 137 aa9.78□□□□□ -0.84
SF3B3-215ENST00000577085 C2orf48Q96LS8 159 aa9.78□□□□□ -0.84
SF3B3-215ENST00000577085 Q6ZN92 141 aa9.77□□□□□ -0.85
SF3B3-215ENST00000577085 IMMP2LQ96T52 175 aa9.77□□□□□ -0.85
SF3B3-215ENST00000577085 PRSS47A8MTI9 375 aa9.76□□□□□ -0.85
SF3B3-215ENST00000577085 PTTG1IPP53801 180 aa9.76□□□□□ -0.85
SF3B3-215ENST00000577085 RPL18AQ02543 176 aaKnown RBP9.76□□□□□ -0.85
SF3B3-215ENST00000577085 ORMDL2Q53FV1 153 aa9.76□□□□□ -0.85
SF3B3-215ENST00000577085 TEX43Q6ZNM6 134 aa9.76□□□□□ -0.85
SF3B3-215ENST00000577085 Q8N8P6 123 aa9.76□□□□□ -0.85
SF3B3-215ENST00000577085 TMEM141Q96I45 108 aa9.76□□□□□ -0.85
SF3B3-215ENST00000577085 C2orf88Q9BSF0 95 aa9.76□□□□□ -0.85
SF3B3-215ENST00000577085 CYSLTR1Q9Y271 337 aa9.76□□□□□ -0.85
SF3B3-215ENST00000577085 PYGO1Q9Y3Y4 419 aa9.76□□□□□ -0.85
SF3B3-215ENST00000577085 IGHV3OR16-9A0A0B4J2B5 98 aa9.75□□□□□ -0.85
SF3B3-215ENST00000577085 SERTAD4-AS1Q5TG53 156 aa9.75□□□□□ -0.85
SF3B3-215ENST00000577085 IGLV4-3A0A075B6K6 122 aa9.74□□□□□ -0.85
SF3B3-215ENST00000577085 TMEM218A2RU14 115 aa9.74□□□□□ -0.85
SF3B3-215ENST00000577085 F8WDY8 70 aa9.74□□□□□ -0.85
SF3B3-215ENST00000577085 NDUFA1O15239 70 aa9.74□□□□□ -0.85
SF3B3-215ENST00000577085 S100PP25815 95 aa9.74□□□□□ -0.85
SF3B3-215ENST00000577085 FAM104AQ969W3 186 aa9.74□□□□□ -0.85
SF3B3-215ENST00000577085 NXT2Q9NPJ8 142 aaKnown RBP9.74□□□□□ -0.85
SF3B3-215ENST00000577085 K7EMI3 77 aa9.73□□□□□ -0.85
SF3B3-215ENST00000577085 G0S2P27469 103 aa9.73□□□□□ -0.85
SF3B3-215ENST00000577085 PRR3P79522 188 aaKnown RBP9.73□□□□□ -0.85
SF3B3-215ENST00000577085 C2orf66Q6UXQ4 117 aa9.73□□□□□ -0.85
SF3B3-215ENST00000577085 VCX2Q9H322 139 aa9.73□□□□□ -0.85
SF3B3-215ENST00000577085 RNF151Q2KHN1 245 aa9.72□□□□□ -0.85
SF3B3-215ENST00000577085 TRAV9-1A0A075B6T8 112 aa9.71□□□□□ -0.86
SF3B3-215ENST00000577085 A0A0J9YXV3 536 aa9.71□□□□□ -0.86
SF3B3-215ENST00000577085 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.71□□□□□ -0.86
SF3B3-215ENST00000577085 ADCYAP1P18509 176 aa9.71□□□□□ -0.86
SF3B3-215ENST00000577085 MRPL35Q9NZE8 188 aaKnown RBP9.71□□□□□ -0.86
SF3B3-215ENST00000577085 A0A087WZ39 114 aa9.7□□□□□ -0.86
SF3B3-215ENST00000577085 IFITM2Q01629 132 aa9.7□□□□□ -0.86
SF3B3-215ENST00000577085 PAPPA-AS1Q5QFB9 102 aa9.7□□□□□ -0.86
SF3B3-215ENST00000577085 LINC00242Q5T6M2 205 aa9.7□□□□□ -0.86
SF3B3-215ENST00000577085 Q6ZRP5 223 aa9.7□□□□□ -0.86
SF3B3-215ENST00000577085 SEC11CQ9BY50 192 aa9.7□□□□□ -0.86
SF3B3-215ENST00000577085 LRP1Q07954 4544 aaKnown RBP9.7□□□□□ -0.86
SF3B3-215ENST00000577085 PKHD1L1Q86WI1 4243 aa9.69□□□□□ -0.86
SF3B3-215ENST00000577085 NPSP0C0P6 89 aa9.69□□□□□ -0.86
SF3B3-215ENST00000577085 UBE2D1P51668 147 aa9.69□□□□□ -0.86
SF3B3-215ENST00000577085 KIAA1644Q3SXP7 199 aa9.69□□□□□ -0.86
SF3B3-215ENST00000577085 COMMD7Q86VX2 200 aa9.69□□□□□ -0.86
SF3B3-215ENST00000577085 C9orf116Q5BN46 136 aaPredicted RBP9.68□□□□□ -0.86
SF3B3-215ENST00000577085 FAT3Q8TDW7 4589 aa9.67□□□□□ -0.86
SF3B3-215ENST00000577085 PRSS2P07478 247 aa9.67□□□□□ -0.86
SF3B3-215ENST00000577085 UNQ6190/PRO20217Q6UXQ8 127 aa9.67□□□□□ -0.86
SF3B3-215ENST00000577085 PACRGQ96M98 296 aaPredicted RBP9.67□□□□□ -0.86
SF3B3-215ENST00000577085 A0A1W2PNN7 141 aa9.66□□□□□ -0.86
SF3B3-215ENST00000577085 MT-ND6P03923 174 aa9.66□□□□□ -0.86
SF3B3-215ENST00000577085 SEC11AP67812 179 aa9.66□□□□□ -0.86
SF3B3-215ENST00000577085 C10orf25Q5T742 122 aa9.66□□□□□ -0.86
SF3B3-215ENST00000577085 ZC2HC1BQ5TFG8 222 aa9.66□□□□□ -0.86
SF3B3-215ENST00000577085 SPINK6Q6UWN8 80 aa9.66□□□□□ -0.86
SF3B3-215ENST00000577085 GNB1LQ9BYB4 327 aa9.66□□□□□ -0.86
SF3B3-215ENST00000577085 IGIPA6NJ69 53 aa9.65□□□□□ -0.86
SF3B3-215ENST00000577085 CKS1BP61024 79 aa9.65□□□□□ -0.86
SF3B3-215ENST00000577085 COX19Q49B96 90 aa9.65□□□□□ -0.86
SF3B3-215ENST00000577085 GAGE2EQ4V326 116 aa9.65□□□□□ -0.86
SF3B3-215ENST00000577085 LINC01561Q8N1V8 128 aa9.65□□□□□ -0.86
SF3B3-215ENST00000577085 AMELXQ99217 191 aa9.65□□□□□ -0.86
SF3B3-215ENST00000577085 GEMIN7Q9H840 131 aaKnown RBP9.65□□□□□ -0.86
SF3B3-215ENST00000577085 C6orf48Q9UBA6 75 aa9.65□□□□□ -0.86
SF3B3-215ENST00000577085 GAGE2DQ9UEU5 116 aa9.65□□□□□ -0.86
SF3B3-215ENST00000577085 HERVK_113P63121 156 aa9.64□□□□□ -0.87
SF3B3-215ENST00000577085 REG3GQ6UW15 175 aa9.64□□□□□ -0.87
SF3B3-215ENST00000577085 LINC00173Q6ZV60 143 aa9.64□□□□□ -0.87
SF3B3-215ENST00000577085 TOMM6Q96B49 74 aa9.64□□□□□ -0.87
SF3B3-215ENST00000577085 SCGB3A1Q96QR1 104 aa9.64□□□□□ -0.87
SF3B3-215ENST00000577085 TIMM17AQ99595 171 aa9.64□□□□□ -0.87
SF3B3-215ENST00000577085 RPS10P5Q9NQ39 176 aa9.64□□□□□ -0.87
SF3B3-215ENST00000577085 TOMM7Q9P0U1 55 aa9.64□□□□□ -0.87
SF3B3-215ENST00000577085 PLA2G2DQ9UNK4 145 aa9.64□□□□□ -0.87
SF3B3-215ENST00000577085 TRBV30A0A0K0K1B3 111 aa9.63□□□□□ -0.87
SF3B3-215ENST00000577085 TLX1NBP0CAT3 122 aa9.63□□□□□ -0.87
SF3B3-215ENST00000577085 RHEBQ15382 184 aa9.63□□□□□ -0.87
SF3B3-215ENST00000577085 C6orf226Q5I0X4 101 aa9.63□□□□□ -0.87
SF3B3-215ENST00000577085 SMCO4Q9NRQ5 59 aa9.63□□□□□ -0.87
SF3B3-215ENST00000577085 LINC01549A6NIU2 74 aa9.62□□□□□ -0.87
SF3B3-215ENST00000577085 FABP9Q0Z7S8 132 aa9.62□□□□□ -0.87
SF3B3-215ENST00000577085 KIAA0087Q14695 138 aa9.62□□□□□ -0.87
SF3B3-215ENST00000577085 C2orf82Q6UX34 121 aa9.62□□□□□ -0.87
SF3B3-215ENST00000577085 PHF5AQ7RTV0 110 aaKnown RBP9.62□□□□□ -0.87
SF3B3-215ENST00000577085 ERASQ7Z444 233 aa9.62□□□□□ -0.87
SF3B3-215ENST00000577085 FA2HQ7L5A8 372 aa9.61□□□□□ -0.87
SF3B3-215ENST00000577085 FAM19A5Q7Z5A7 132 aaPredicted RBP9.61□□□□□ -0.87
SF3B3-215ENST00000577085 ALKBH7Q9BT30 221 aaPredicted RBP9.61□□□□□ -0.87
SF3B3-215ENST00000577085 MRPL18Q9H0U6 180 aaKnown RBP9.61□□□□□ -0.87
SF3B3-215ENST00000577085 NDUFC2-KCTD14E9PQ53 114 aa9.6□□□□□ -0.87
SF3B3-215ENST00000577085 MT1HL1P0DM35 61 aa9.6□□□□□ -0.87
SF3B3-215ENST00000577085 C1orf137Q5JT78 98 aa9.6□□□□□ -0.87
SF3B3-215ENST00000577085 PSORS1C2Q9UIG4 136 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms