RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 IGHV3-64A0A075B6Q5 118 aa5.47□□□□□ -1.53
SMG6-216ENST00000575176 TGIF2-C20orf24A0A0A6YYL0 155 aa5.47□□□□□ -1.53
SMG6-216ENST00000575176 INAFM2P0DMQ5 153 aa5.47□□□□□ -1.53
SMG6-216ENST00000575176 UBE2D1P51668 147 aa5.47□□□□□ -1.53
SMG6-216ENST00000575176 COX6A2Q02221 97 aa5.47□□□□□ -1.53
SMG6-216ENST00000575176 KIAA0087Q14695 138 aa5.47□□□□□ -1.53
SMG6-216ENST00000575176 SS18Q15532 418 aa5.47□□□□□ -1.53
SMG6-216ENST00000575176 C2orf66Q6UXQ4 117 aa5.47□□□□□ -1.53
SMG6-216ENST00000575176 Q6ZRU5 148 aa5.47□□□□□ -1.53
SMG6-216ENST00000575176 IGLV4-69A0A075B6H9 119 aa5.46□□□□□ -1.54
SMG6-216ENST00000575176 A0A087WYN8 130 aa5.46□□□□□ -1.54
SMG6-216ENST00000575176 K7EMI3 77 aa5.46□□□□□ -1.54
SMG6-216ENST00000575176 COX7A2LO14548 114 aa5.46□□□□□ -1.54
SMG6-216ENST00000575176 C5orf38Q86SI9 138 aa5.46□□□□□ -1.54
SMG6-216ENST00000575176 TMEM18Q96B42 140 aa5.46□□□□□ -1.54
SMG6-216ENST00000575176 NXT2Q9NPJ8 142 aaKnown RBP5.46□□□□□ -1.54
SMG6-216ENST00000575176 A0A087WZ39 114 aa5.45□□□□□ -1.54
SMG6-216ENST00000575176 IFITM10A6NMD0 228 aa5.45□□□□□ -1.54
SMG6-216ENST00000575176 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.45□□□□□ -1.54
SMG6-216ENST00000575176 NPSP0C0P6 89 aa5.45□□□□□ -1.54
SMG6-216ENST00000575176 C10orf25Q5T742 122 aa5.45□□□□□ -1.54
SMG6-216ENST00000575176 CFAP161Q6P656 301 aa5.45□□□□□ -1.54
SMG6-216ENST00000575176 TOMM6Q96B49 74 aa5.45□□□□□ -1.54
SMG6-216ENST00000575176 TMEM141Q96I45 108 aa5.45□□□□□ -1.54
SMG6-216ENST00000575176 CARD19Q96LW7 228 aa5.45□□□□□ -1.54
SMG6-216ENST00000575176 TIMM17AQ99595 171 aa5.45□□□□□ -1.54
SMG6-216ENST00000575176 MRPL18Q9H0U6 180 aaKnown RBP5.45□□□□□ -1.54
SMG6-216ENST00000575176 RPS10P5Q9NQ39 176 aa5.45□□□□□ -1.54
SMG6-216ENST00000575176 CYSLTR1Q9Y271 337 aa5.45□□□□□ -1.54
SMG6-216ENST00000575176 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.44□□□□□ -1.54
SMG6-216ENST00000575176 FAM229AH3BQW9 127 aa5.44□□□□□ -1.54
SMG6-216ENST00000575176 APOC3P02656 99 aa5.44□□□□□ -1.54
SMG6-216ENST00000575176 MT-ND6P03923 174 aa5.44□□□□□ -1.54
SMG6-216ENST00000575176 S100A1P23297 94 aa5.44□□□□□ -1.54
SMG6-216ENST00000575176 SPAG11BQ08648 103 aa5.44□□□□□ -1.54
SMG6-216ENST00000575176 SMAGPQ0VAQ4 97 aa5.44□□□□□ -1.54
SMG6-216ENST00000575176 ORMDL2Q53FV1 153 aa5.44□□□□□ -1.54
SMG6-216ENST00000575176 OR10D4PQ8NGN7 298 aa5.44□□□□□ -1.54
SMG6-216ENST00000575176 C18orf32Q8TCD1 76 aa5.44□□□□□ -1.54
SMG6-216ENST00000575176 C2orf48Q96LS8 159 aa5.44□□□□□ -1.54
SMG6-216ENST00000575176 AP5S1Q9NUS5 200 aa5.44□□□□□ -1.54
SMG6-216ENST00000575176 RAB5AP20339 215 aa5.43□□□□□ -1.54
SMG6-216ENST00000575176 SYCNQ0VAF6 134 aa5.43□□□□□ -1.54
SMG6-216ENST00000575176 KRTAP7-1Q8IUC3 87 aa5.43□□□□□ -1.54
SMG6-216ENST00000575176 SVBPQ8N300 66 aa5.43□□□□□ -1.54
SMG6-216ENST00000575176 IGLV5-45A0A087WSX0 123 aa5.42□□□□□ -1.54
SMG6-216ENST00000575176 IGKV2-24A0A0C4DH68 120 aa5.42□□□□□ -1.54
SMG6-216ENST00000575176 A0A0J9YXV3 536 aa5.42□□□□□ -1.54
SMG6-216ENST00000575176 PLA2G1BP04054 148 aaKnown RBP5.42□□□□□ -1.54
SMG6-216ENST00000575176 S100PP25815 95 aa5.42□□□□□ -1.54
SMG6-216ENST00000575176 PTTG1IPP53801 180 aa5.42□□□□□ -1.54
SMG6-216ENST00000575176 NDUFA5Q16718 116 aa5.42□□□□□ -1.54
SMG6-216ENST00000575176 COX19Q49B96 90 aa5.42□□□□□ -1.54
SMG6-216ENST00000575176 TEX43Q6ZNM6 134 aa5.42□□□□□ -1.54
SMG6-216ENST00000575176 CBLN2Q8IUK8 224 aa5.42□□□□□ -1.54
SMG6-216ENST00000575176 ORAOV1Q8WV07 137 aa5.42□□□□□ -1.54
SMG6-216ENST00000575176 C6orf48Q9UBA6 75 aa5.42□□□□□ -1.54
SMG6-216ENST00000575176 KRTAP29-1A8MX34 341 aaPredicted RBP5.41□□□□□ -1.54
SMG6-216ENST00000575176 SNAPINO95295 136 aa5.41□□□□□ -1.54
SMG6-216ENST00000575176 APOMO95445 188 aa5.41□□□□□ -1.54
SMG6-216ENST00000575176 LINC00310P59036 64 aa5.41□□□□□ -1.54
SMG6-216ENST00000575176 RPL37AP61513 92 aaKnown RBP5.41□□□□□ -1.54
SMG6-216ENST00000575176 ERASQ7Z444 233 aa5.41□□□□□ -1.54
SMG6-216ENST00000575176 LINC01561Q8N1V8 128 aa5.41□□□□□ -1.54
SMG6-216ENST00000575176 MRPL35Q9NZE8 188 aaKnown RBP5.41□□□□□ -1.54
SMG6-216ENST00000575176 A0A1W2PNN7 141 aa5.4□□□□□ -1.54
SMG6-216ENST00000575176 ZNF561-AS1K7EIQ3 104 aa5.4□□□□□ -1.54
SMG6-216ENST00000575176 TLX1NBP0CAT3 122 aa5.4□□□□□ -1.54
SMG6-216ENST00000575176 MT1HL1P0DM35 61 aa5.4□□□□□ -1.54
SMG6-216ENST00000575176 PRR3P79522 188 aaKnown RBP5.4□□□□□ -1.54
SMG6-216ENST00000575176 FABP9Q0Z7S8 132 aa5.4□□□□□ -1.54
SMG6-216ENST00000575176 RNF151Q2KHN1 245 aa5.4□□□□□ -1.54
SMG6-216ENST00000575176 UNQ6190/PRO20217Q6UXQ8 127 aa5.4□□□□□ -1.54
SMG6-216ENST00000575176 Q6ZRP5 223 aa5.4□□□□□ -1.54
SMG6-216ENST00000575176 SLC7A5P1Q8MH63 180 aa5.4□□□□□ -1.54
SMG6-216ENST00000575176 STPG4Q8N801 248 aa5.4□□□□□ -1.54
SMG6-216ENST00000575176 CAMK2N2Q96S95 79 aa5.4□□□□□ -1.54
SMG6-216ENST00000575176 CDKN2A-AS1Q9UH64 79 aa5.4□□□□□ -1.54
SMG6-216ENST00000575176 LOC107984640A0A0U1RRK4 108 aa5.39□□□□□ -1.55
SMG6-216ENST00000575176 SMIM1B2RUZ4 78 aa5.39□□□□□ -1.55
SMG6-216ENST00000575176 MALP21145 153 aa5.39□□□□□ -1.55
SMG6-216ENST00000575176 MAJINQ3KP22 176 aa5.39□□□□□ -1.55
SMG6-216ENST00000575176 PDZD11Q5EBL8 140 aa5.39□□□□□ -1.55
SMG6-216ENST00000575176 C2orf82Q6UX34 121 aa5.39□□□□□ -1.55
SMG6-216ENST00000575176 KRTAP11-1Q8IUC1 163 aa5.39□□□□□ -1.55
SMG6-216ENST00000575176 F8WDY8 70 aa5.38□□□□□ -1.55
SMG6-216ENST00000575176 CST9LQ9H4G1 147 aa5.38□□□□□ -1.55
SMG6-216ENST00000575176 TRAPPC1Q9Y5R8 145 aa5.38□□□□□ -1.55
SMG6-216ENST00000575176 TINCRA0A1B0GVN0 87 aa5.37□□□□□ -1.55
SMG6-216ENST00000575176 FAM168BA1KXE4 195 aa5.37□□□□□ -1.55
SMG6-216ENST00000575176 PMCHL1Q16048 86 aa5.37□□□□□ -1.55
SMG6-216ENST00000575176 C9orf129Q5T035 196 aaKnown RBP5.37□□□□□ -1.55
SMG6-216ENST00000575176 Q6ZN92 141 aa5.37□□□□□ -1.55
SMG6-216ENST00000575176 Q8IZM0 81 aa5.37□□□□□ -1.55
SMG6-216ENST00000575176 SCGB3A1Q96QR1 104 aa5.37□□□□□ -1.55
SMG6-216ENST00000575176 C2orf88Q9BSF0 95 aa5.37□□□□□ -1.55
SMG6-216ENST00000575176 VCX2Q9H322 139 aa5.37□□□□□ -1.55
SMG6-216ENST00000575176 IGLV5-39A0A0G2JS06 123 aa5.36□□□□□ -1.55
SMG6-216ENST00000575176 NDUFA1O15239 70 aa5.36□□□□□ -1.55
SMG6-216ENST00000575176 IGLC3P0DOY3 106 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms