RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 IGHV3OR16-9A0A0B4J2B5 98 aa17.66■□□□□ 0.42
SCARF1-207ENST00000573867 K7EMI3 77 aa17.66■□□□□ 0.42
SCARF1-207ENST00000573867 SPACA4Q8TDM5 124 aa17.66■□□□□ 0.42
SCARF1-207ENST00000573867 IGLV4-69A0A075B6H9 119 aa17.65■□□□□ 0.42
SCARF1-207ENST00000573867 LINC00173Q6ZV60 143 aa17.65■□□□□ 0.42
SCARF1-207ENST00000573867 TMEM141Q96I45 108 aa17.65■□□□□ 0.42
SCARF1-207ENST00000573867 MRPL18Q9H0U6 180 aaKnown RBP17.65■□□□□ 0.42
SCARF1-207ENST00000573867 IGIPA6NJ69 53 aa17.64■□□□□ 0.41
SCARF1-207ENST00000573867 ZNF561-AS1K7EIQ3 104 aa17.64■□□□□ 0.41
SCARF1-207ENST00000573867 COX19Q49B96 90 aa17.64■□□□□ 0.41
SCARF1-207ENST00000573867 CARD19Q96LW7 228 aa17.64■□□□□ 0.41
SCARF1-207ENST00000573867 PLA2G1BP04054 148 aaKnown RBP17.63■□□□□ 0.41
SCARF1-207ENST00000573867 MT-ND6P03923 174 aa17.62■□□□□ 0.41
SCARF1-207ENST00000573867 SYCNQ0VAF6 134 aa17.62■□□□□ 0.41
SCARF1-207ENST00000573867 FABP9Q0Z7S8 132 aa17.62■□□□□ 0.41
SCARF1-207ENST00000573867 LINC00242Q5T6M2 205 aa17.62■□□□□ 0.41
SCARF1-207ENST00000573867 SVBPQ8N300 66 aa17.62■□□□□ 0.41
SCARF1-207ENST00000573867 A0A087WYN8 130 aa17.61■□□□□ 0.41
SCARF1-207ENST00000573867 SNAPINO95295 136 aa17.61■□□□□ 0.41
SCARF1-207ENST00000573867 Q6ZRU5 148 aa17.61■□□□□ 0.41
SCARF1-207ENST00000573867 AMELXQ99217 191 aa17.61■□□□□ 0.41
SCARF1-207ENST00000573867 A0A096LNI7 61 aa17.6■□□□□ 0.41
SCARF1-207ENST00000573867 UBE2D1P51668 147 aa17.6■□□□□ 0.41
SCARF1-207ENST00000573867 NDUFA5Q16718 116 aa17.6■□□□□ 0.41
SCARF1-207ENST00000573867 IGKV2-24A0A0C4DH68 120 aa17.59■□□□□ 0.41
SCARF1-207ENST00000573867 TEX43Q6ZNM6 134 aa17.59■□□□□ 0.41
SCARF1-207ENST00000573867 LINC01546A6NGU7 62 aa17.58■□□□□ 0.4
SCARF1-207ENST00000573867 APOMO95445 188 aa17.58■□□□□ 0.4
SCARF1-207ENST00000573867 SPAG11BQ08648 103 aa17.58■□□□□ 0.4
SCARF1-207ENST00000573867 TOMM6Q96B49 74 aa17.58■□□□□ 0.4
SCARF1-207ENST00000573867 FLG2Q5D862 2391 aaPredicted RBP17.58■□□□□ 0.4
SCARF1-207ENST00000573867 ORAOV1Q8WV07 137 aa17.56■□□□□ 0.4
SCARF1-207ENST00000573867 C2orf48Q96LS8 159 aa17.56■□□□□ 0.4
SCARF1-207ENST00000573867 PLAC8Q9NZF1 115 aa17.56■□□□□ 0.4
SCARF1-207ENST00000573867 NPSP0C0P6 89 aa17.55■□□□□ 0.4
SCARF1-207ENST00000573867 MAJINQ3KP22 176 aa17.55■□□□□ 0.4
SCARF1-207ENST00000573867 Q6ZN92 141 aa17.55■□□□□ 0.4
SCARF1-207ENST00000573867 OR10D4PQ8NGN7 298 aa17.55■□□□□ 0.4
SCARF1-207ENST00000573867 DPH3Q96FX2 82 aa17.55■□□□□ 0.4
SCARF1-207ENST00000573867 YPEL4Q96NS1 127 aa17.55■□□□□ 0.4
SCARF1-207ENST00000573867 CAMK2N2Q96S95 79 aa17.55■□□□□ 0.4
SCARF1-207ENST00000573867 VCX2Q9H322 139 aa17.55■□□□□ 0.4
SCARF1-207ENST00000573867 PKHD1L1Q86WI1 4243 aa17.55■□□□□ 0.4
SCARF1-207ENST00000573867 A0A087WZ39 114 aa17.54■□□□□ 0.4
SCARF1-207ENST00000573867 TIMM17AQ99595 171 aa17.54■□□□□ 0.4
SCARF1-207ENST00000573867 C2orf88Q9BSF0 95 aa17.54■□□□□ 0.4
SCARF1-207ENST00000573867 TRAPPC1Q9Y5R8 145 aa17.53■□□□□ 0.4
SCARF1-207ENST00000573867 RPL37AP61513 92 aaKnown RBP17.52■□□□□ 0.4
SCARF1-207ENST00000573867 G0S2P27469 103 aa17.51■□□□□ 0.39
SCARF1-207ENST00000573867 URB1-AS1Q96HZ7 61 aa17.5■□□□□ 0.39
SCARF1-207ENST00000573867 A0A0J9YXV3 536 aa17.49■□□□□ 0.39
SCARF1-207ENST00000573867 KIAA0087Q14695 138 aa17.49■□□□□ 0.39
SCARF1-207ENST00000573867 FA2HQ7L5A8 372 aa17.49■□□□□ 0.39
SCARF1-207ENST00000573867 ERASQ7Z444 233 aa17.49■□□□□ 0.39
SCARF1-207ENST00000573867 FAM19A3Q7Z5A8 133 aa17.49■□□□□ 0.39
SCARF1-207ENST00000573867 SLC7A5P1Q8MH63 180 aa17.49■□□□□ 0.39
SCARF1-207ENST00000573867 STPG4Q8N801 248 aa17.49■□□□□ 0.39
SCARF1-207ENST00000573867 SCGB3A1Q96QR1 104 aa17.49■□□□□ 0.39
SCARF1-207ENST00000573867 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.48■□□□□ 0.39
SCARF1-207ENST00000573867 C10orf25Q5T742 122 aa17.48■□□□□ 0.39
SCARF1-207ENST00000573867 C18orf32Q8TCD1 76 aa17.48■□□□□ 0.39
SCARF1-207ENST00000573867 HERC1Q15751 4861 aa17.47■□□□□ 0.39
SCARF1-207ENST00000573867 LRP1Q07954 4544 aaKnown RBP17.46■□□□□ 0.39
SCARF1-207ENST00000573867 LOC107984640A0A0U1RRK4 108 aa17.46■□□□□ 0.39
SCARF1-207ENST00000573867 HNRNPA3P51991 378 aaKnown RBP17.46■□□□□ 0.39
SCARF1-207ENST00000573867 PTTG1IPP53801 180 aa17.46■□□□□ 0.39
SCARF1-207ENST00000573867 PKIGQ9Y2B9 76 aa17.46■□□□□ 0.39
SCARF1-207ENST00000573867 PAPPA-AS1Q5QFB9 102 aa17.45■□□□□ 0.38
SCARF1-207ENST00000573867 UNQ6190/PRO20217Q6UXQ8 127 aa17.45■□□□□ 0.38
SCARF1-207ENST00000573867 SMCO4Q9NRQ5 59 aa17.45■□□□□ 0.38
SCARF1-207ENST00000573867 MRPL35Q9NZE8 188 aaKnown RBP17.45■□□□□ 0.38
SCARF1-207ENST00000573867 FAT3Q8TDW7 4589 aa17.45■□□□□ 0.38
SCARF1-207ENST00000573867 A0A096LNJ9 63 aa17.44■□□□□ 0.38
SCARF1-207ENST00000573867 GAGE2BQ13066 116 aa17.44■□□□□ 0.38
SCARF1-207ENST00000573867 RNF151Q2KHN1 245 aa17.44■□□□□ 0.38
SCARF1-207ENST00000573867 CBLN2Q8IUK8 224 aa17.44■□□□□ 0.38
SCARF1-207ENST00000573867 LINC01561Q8N1V8 128 aa17.44■□□□□ 0.38
SCARF1-207ENST00000573867 LINC00474Q9P2X8 69 aa17.44■□□□□ 0.38
SCARF1-207ENST00000573867 F8WDY8 70 aa17.42■□□□□ 0.38
SCARF1-207ENST00000573867 NDUFA1O15239 70 aa17.42■□□□□ 0.38
SCARF1-207ENST00000573867 C6orf48Q9UBA6 75 aa17.42■□□□□ 0.38
SCARF1-207ENST00000573867 CDKN2A-AS1Q9UH64 79 aa17.41■□□□□ 0.38
SCARF1-207ENST00000573867 C2orf82Q6UX34 121 aa17.4■□□□□ 0.38
SCARF1-207ENST00000573867 LINC01549A6NIU2 74 aa17.39■□□□□ 0.37
SCARF1-207ENST00000573867 LINC00614P0C842 121 aa17.39■□□□□ 0.37
SCARF1-207ENST00000573867 HERVK_113P63121 156 aa17.39■□□□□ 0.37
SCARF1-207ENST00000573867 RPL18AQ02543 176 aaKnown RBP17.39■□□□□ 0.37
SCARF1-207ENST00000573867 A0A1W2PNN7 141 aa17.38■□□□□ 0.37
SCARF1-207ENST00000573867 CST9LQ9H4G1 147 aa17.38■□□□□ 0.37
SCARF1-207ENST00000573867 PMCHL1Q16048 86 aa17.37■□□□□ 0.37
SCARF1-207ENST00000573867 DMBT1Q9UGM3 2413 aaPredicted RBP17.36■□□□□ 0.37
SCARF1-207ENST00000573867 SEC11AP67812 179 aa17.36■□□□□ 0.37
SCARF1-207ENST00000573867 GEMIN7Q9H840 131 aaKnown RBP17.36■□□□□ 0.37
SCARF1-207ENST00000573867 C7orf33Q8WU49 177 aa17.35■□□□□ 0.37
SCARF1-207ENST00000573867 Q6ZRP5 223 aa17.34■□□□□ 0.37
SCARF1-207ENST00000573867 TINCRA0A1B0GVN0 87 aa17.33■□□□□ 0.36
SCARF1-207ENST00000573867 TLX1NBP0CAT3 122 aa17.33■□□□□ 0.36
SCARF1-207ENST00000573867 PMVKQ15126 192 aa17.33■□□□□ 0.36
SCARF1-207ENST00000573867 TOMM7Q9P0U1 55 aa17.33■□□□□ 0.36
SCARF1-207ENST00000573867 IGLV5-45A0A087WSX0 123 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms