RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 TP73-AS1Q9UF72 201 aa7.32□□□□□ -1.24
CCDC40-208ENST00000572270 TRBV27A0A0K0K1C4 114 aa7.31□□□□□ -1.24
CCDC40-208ENST00000572270 C4orf48Q5BLP8 95 aa7.31□□□□□ -1.24
CCDC40-208ENST00000572270 LINC00469Q8N7U9 141 aa7.31□□□□□ -1.24
CCDC40-208ENST00000572270 DAND5Q8N907 189 aa7.31□□□□□ -1.24
CCDC40-208ENST00000572270 SMIM12Q96EX1 92 aa7.31□□□□□ -1.24
CCDC40-208ENST00000572270 BIN3Q9NQY0 253 aa7.31□□□□□ -1.24
CCDC40-208ENST00000572270 ZNF727A8MUV8 499 aa7.3□□□□□ -1.24
CCDC40-208ENST00000572270 GNG4P50150 75 aa7.3□□□□□ -1.24
CCDC40-208ENST00000572270 POLR2KP53803 58 aaKnown RBP7.3□□□□□ -1.24
CCDC40-208ENST00000572270 C2orf82Q6UX34 121 aa7.3□□□□□ -1.24
CCDC40-208ENST00000572270 KCNRGQ8N5I3 272 aa7.3□□□□□ -1.24
CCDC40-208ENST00000572270 SFT2D1Q8WV19 159 aa7.3□□□□□ -1.24
CCDC40-208ENST00000572270 TMEM18Q96B42 140 aa7.3□□□□□ -1.24
CCDC40-208ENST00000572270 MARVELD1Q9BSK0 173 aa7.3□□□□□ -1.24
CCDC40-208ENST00000572270 TGIF2-C20orf24A0A0A6YYL0 155 aa7.29□□□□□ -1.24
CCDC40-208ENST00000572270 RPL37AP8A6NKH3 93 aa7.29□□□□□ -1.24
CCDC40-208ENST00000572270 UPK1BO75841 260 aa7.29□□□□□ -1.24
CCDC40-208ENST00000572270 KIAA0087Q14695 138 aa7.29□□□□□ -1.24
CCDC40-208ENST00000572270 C3orf22Q8N5N4 141 aa7.29□□□□□ -1.24
CCDC40-208ENST00000572270 XAGE1AQ9HD64 81 aa7.29□□□□□ -1.24
CCDC40-208ENST00000572270 NDUFA12Q9UI09 145 aa7.29□□□□□ -1.24
CCDC40-208ENST00000572270 TNFRSF6BO95407 300 aa7.28□□□□□ -1.24
CCDC40-208ENST00000572270 KRTAP13-1Q8IUC0 172 aa7.28□□□□□ -1.24
CCDC40-208ENST00000572270 TIMM21Q9BVV7 248 aa7.28□□□□□ -1.24
CCDC40-208ENST00000572270 VCYO14598 125 aa7.27□□□□□ -1.25
CCDC40-208ENST00000572270 XP32Q5T750 250 aa7.27□□□□□ -1.25
CCDC40-208ENST00000572270 C11orf52Q96A22 123 aa7.27□□□□□ -1.25
CCDC40-208ENST00000572270 KIR2DL4Q99706 377 aa7.27□□□□□ -1.25
CCDC40-208ENST00000572270 IFITM10A6NMD0 228 aa7.26□□□□□ -1.25
CCDC40-208ENST00000572270 CCL20P78556 96 aa7.26□□□□□ -1.25
CCDC40-208ENST00000572270 NUDT10Q8NFP7 164 aa7.26□□□□□ -1.25
CCDC40-208ENST00000572270 FAM213BQ8TBF2 198 aa7.26□□□□□ -1.25
CCDC40-208ENST00000572270 NUDT11Q96G61 164 aa7.26□□□□□ -1.25
CCDC40-208ENST00000572270 LINC00167Q96N53 147 aa7.26□□□□□ -1.25
CCDC40-208ENST00000572270 MBD3L1Q8WWY6 194 aa7.25□□□□□ -1.25
CCDC40-208ENST00000572270 FXYD6-FXYD2A0A087WZ82 144 aa7.24□□□□□ -1.25
CCDC40-208ENST00000572270 HBBP68871 147 aa7.24□□□□□ -1.25
CCDC40-208ENST00000572270 GAGE10A6NGK3 116 aa7.23□□□□□ -1.25
CCDC40-208ENST00000572270 PRSS2P07478 247 aa7.23□□□□□ -1.25
CCDC40-208ENST00000572270 MANBALQ9NQG1 85 aa7.23□□□□□ -1.25
CCDC40-208ENST00000572270 IGLV8-61A0A075B6I0 122 aa7.22□□□□□ -1.25
CCDC40-208ENST00000572270 CKS1BP61024 79 aa7.22□□□□□ -1.25
CCDC40-208ENST00000572270 PNRC1Q12796 327 aaPredicted RBP7.22□□□□□ -1.25
CCDC40-208ENST00000572270 BORCS7Q96B45 105 aa7.22□□□□□ -1.25
CCDC40-208ENST00000572270 SSPOA2VEC9 5147 aa7.21□□□□□ -1.25
CCDC40-208ENST00000572270 TRBV20OR9-2A0A075B6H5 130 aa7.21□□□□□ -1.26
CCDC40-208ENST00000572270 RPL32P62910 135 aaKnown RBP7.21□□□□□ -1.26
CCDC40-208ENST00000572270 PRLHP81277 87 aa7.21□□□□□ -1.26
CCDC40-208ENST00000572270 Q5BKY6 102 aa7.21□□□□□ -1.26
CCDC40-208ENST00000572270 FAM19A2Q8N3H0 131 aa7.21□□□□□ -1.26
CCDC40-208ENST00000572270 S100ZQ8WXG8 99 aa7.21□□□□□ -1.26
CCDC40-208ENST00000572270 GNG13Q9P2W3 67 aa7.21□□□□□ -1.26
CCDC40-208ENST00000572270 UMAD1C9J7I0 102 aa7.2□□□□□ -1.26
CCDC40-208ENST00000572270 PPP1R17O96001 155 aa7.2□□□□□ -1.26
CCDC40-208ENST00000572270 SPINK1P00995 79 aa7.2□□□□□ -1.26
CCDC40-208ENST00000572270 H2AFB1P0C5Y9 115 aa7.2□□□□□ -1.26
CCDC40-208ENST00000572270 SUMO2P61956 95 aaKnown RBP7.2□□□□□ -1.26
CCDC40-208ENST00000572270 RPL39P62891 51 aaKnown RBP7.2□□□□□ -1.26
CCDC40-208ENST00000572270 SPANXA1Q9NS26 97 aa7.2□□□□□ -1.26
CCDC40-208ENST00000572270 MRPS36P82909 103 aaKnown RBP7.19□□□□□ -1.26
CCDC40-208ENST00000572270 FAM19A1Q7Z5A9 133 aa7.19□□□□□ -1.26
CCDC40-208ENST00000572270 NKAPP1Q8N9T2 125 aa7.19□□□□□ -1.26
CCDC40-208ENST00000572270 Q8NBF4 154 aa7.19□□□□□ -1.26
CCDC40-208ENST00000572270 TMEM191AQ9H0A3 160 aa7.19□□□□□ -1.26
CCDC40-208ENST00000572270 TOMM7Q9P0U1 55 aa7.19□□□□□ -1.26
CCDC40-208ENST00000572270 USH2AO75445 5202 aa7.19□□□□□ -1.26
CCDC40-208ENST00000572270 SMKR1H3BMG3 65 aa7.18□□□□□ -1.26
CCDC40-208ENST00000572270 PPP1R2P9O14990 202 aa7.18□□□□□ -1.26
CCDC40-208ENST00000572270 RAB4AP20338 218 aa7.18□□□□□ -1.26
CCDC40-208ENST00000572270 PCOTHQ58A44 107 aa7.18□□□□□ -1.26
CCDC40-208ENST00000572270 C6orf226Q5I0X4 101 aa7.18□□□□□ -1.26
CCDC40-208ENST00000572270 COX6B2Q6YFQ2 88 aa7.18□□□□□ -1.26
CCDC40-208ENST00000572270 IGKV2-28A0A075B6P5 120 aa7.17□□□□□ -1.26
CCDC40-208ENST00000572270 TCAPO15273 167 aa7.17□□□□□ -1.26
CCDC40-208ENST00000572270 PDE6DO43924 150 aa7.17□□□□□ -1.26
CCDC40-208ENST00000572270 IGKV2D-28P01615 120 aa7.17□□□□□ -1.26
CCDC40-208ENST00000572270 AMN1Q8IY45 258 aa7.17□□□□□ -1.26
CCDC40-208ENST00000572270 LINC01561Q8N1V8 128 aa7.17□□□□□ -1.26
CCDC40-208ENST00000572270 FAM104AQ969W3 186 aa7.17□□□□□ -1.26
CCDC40-208ENST00000572270 PLEKHB2Q96CS7 222 aa7.17□□□□□ -1.26
CCDC40-208ENST00000572270 MED9Q9NWA0 146 aa7.17□□□□□ -1.26
CCDC40-208ENST00000572270 GIPP09681 153 aaPredicted RBP7.16□□□□□ -1.26
CCDC40-208ENST00000572270 IFITM3Q01628 133 aa7.16□□□□□ -1.26
CCDC40-208ENST00000572270 FLGP20930 4061 aaPredicted RBP7.16□□□□□ -1.26
CCDC40-208ENST00000572270 FCGBPQ9Y6R7 5405 aaPredicted RBP7.15□□□□□ -1.26
CCDC40-208ENST00000572270 A8MWL6 223 aa7.15□□□□□ -1.26
CCDC40-208ENST00000572270 Q6ZN92 141 aa7.15□□□□□ -1.26
CCDC40-208ENST00000572270 CBLN2Q8IUK8 224 aa7.15□□□□□ -1.26
CCDC40-208ENST00000572270 GNB1LQ9BYB4 327 aa7.15□□□□□ -1.26
CCDC40-208ENST00000572270 GATCO43716 136 aaKnown RBP7.14□□□□□ -1.27
CCDC40-208ENST00000572270 LINC00299Q6ZSB3 139 aa7.14□□□□□ -1.27
CCDC40-208ENST00000572270 Q8IZM0 81 aa7.14□□□□□ -1.27
CCDC40-208ENST00000572270 NRACQ8N912 160 aa7.14□□□□□ -1.27
CCDC40-208ENST00000572270 ALKBH7Q9BT30 221 aaPredicted RBP7.14□□□□□ -1.27
CCDC40-208ENST00000572270 IGLV5-37A0A075B6J1 123 aa7.13□□□□□ -1.27
CCDC40-208ENST00000572270 A0A1B0GUT8 65 aa7.13□□□□□ -1.27
CCDC40-208ENST00000572270 F8VRH5 84 aa7.13□□□□□ -1.27
CCDC40-208ENST00000572270 K7EN84 100 aa7.13□□□□□ -1.27
CCDC40-208ENST00000572270 ARPC5O15511 151 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms