RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 PRSS47A8MTI9 375 aa6.55□□□□□ -1.36
GTF3C1-213ENST00000571886 CHTF8P0CG12 524 aa6.55□□□□□ -1.36
GTF3C1-213ENST00000571886 SS18Q15532 418 aa6.55□□□□□ -1.36
GTF3C1-213ENST00000571886 KIAA1644Q3SXP7 199 aa6.55□□□□□ -1.36
GTF3C1-213ENST00000571886 CFAP161Q6P656 301 aa6.55□□□□□ -1.36
GTF3C1-213ENST00000571886 TIMM21Q9BVV7 248 aa6.55□□□□□ -1.36
GTF3C1-213ENST00000571886 GVQW2A0A096LPI5 108 aaPredicted RBP6.54□□□□□ -1.36
GTF3C1-213ENST00000571886 TRAV13-1A0A0B4J241 112 aa6.54□□□□□ -1.36
GTF3C1-213ENST00000571886 IFITM10A6NMD0 228 aa6.54□□□□□ -1.36
GTF3C1-213ENST00000571886 KRTAP10-4P60372 401 aaPredicted RBP6.54□□□□□ -1.36
GTF3C1-213ENST00000571886 COX19Q49B96 90 aa6.54□□□□□ -1.36
GTF3C1-213ENST00000571886 CD164L2Q6UWJ8 174 aa6.54□□□□□ -1.36
GTF3C1-213ENST00000571886 HIST3H2BBQ8N257 126 aa6.54□□□□□ -1.36
GTF3C1-213ENST00000571886 AP5S1Q9NUS5 200 aa6.54□□□□□ -1.36
GTF3C1-213ENST00000571886 C5orf38Q86SI9 138 aa6.53□□□□□ -1.36
GTF3C1-213ENST00000571886 PRSS3P2Q8NHM4 247 aa6.53□□□□□ -1.36
GTF3C1-213ENST00000571886 TMEM18Q96B42 140 aa6.53□□□□□ -1.36
GTF3C1-213ENST00000571886 IGHV3-64A0A075B6Q5 118 aa6.52□□□□□ -1.37
GTF3C1-213ENST00000571886 IGHV1-58A0A0C4DH39 117 aa6.52□□□□□ -1.37
GTF3C1-213ENST00000571886 COX6A2Q02221 97 aa6.52□□□□□ -1.37
GTF3C1-213ENST00000571886 ZC2HC1BQ5TFG8 222 aa6.52□□□□□ -1.37
GTF3C1-213ENST00000571886 Q8N8P6 123 aa6.52□□□□□ -1.37
GTF3C1-213ENST00000571886 MAP1LC3AQ9H492 121 aa6.52□□□□□ -1.37
GTF3C1-213ENST00000571886 MYCBP2O75592 4640 aa6.52□□□□□ -1.37
GTF3C1-213ENST00000571886 FLG2Q5D862 2391 aaPredicted RBP6.51□□□□□ -1.37
GTF3C1-213ENST00000571886 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.51□□□□□ -1.37
GTF3C1-213ENST00000571886 IFI27P40305 119 aaPredicted RBP6.51□□□□□ -1.37
GTF3C1-213ENST00000571886 MRPS36P82909 103 aaKnown RBP6.51□□□□□ -1.37
GTF3C1-213ENST00000571886 CIRBPQ14011 172 aaKnown RBP6.51□□□□□ -1.37
GTF3C1-213ENST00000571886 SPANXA1Q9NS26 97 aa6.51□□□□□ -1.37
GTF3C1-213ENST00000571886 LAMTOR2Q9Y2Q5 125 aa6.51□□□□□ -1.37
GTF3C1-213ENST00000571886 IGLV4-3A0A075B6K6 122 aa6.5□□□□□ -1.37
GTF3C1-213ENST00000571886 PCP4L1A6NKN8 68 aa6.5□□□□□ -1.37
GTF3C1-213ENST00000571886 CTAG1AP78358 180 aa6.5□□□□□ -1.37
GTF3C1-213ENST00000571886 SMAGPQ0VAQ4 97 aa6.5□□□□□ -1.37
GTF3C1-213ENST00000571886 OR10D4PQ8NGN7 298 aa6.5□□□□□ -1.37
GTF3C1-213ENST00000571886 SPACA4Q8TDM5 124 aa6.5□□□□□ -1.37
GTF3C1-213ENST00000571886 GNB1LQ9BYB4 327 aa6.5□□□□□ -1.37
GTF3C1-213ENST00000571886 TRAPPC1Q9Y5R8 145 aa6.5□□□□□ -1.37
GTF3C1-213ENST00000571886 IGLV4-69A0A075B6H9 119 aa6.49□□□□□ -1.37
GTF3C1-213ENST00000571886 A0A087WYN8 130 aa6.49□□□□□ -1.37
GTF3C1-213ENST00000571886 IGHV3OR16-9A0A0B4J2B5 98 aa6.49□□□□□ -1.37
GTF3C1-213ENST00000571886 COX7A2LO14548 114 aa6.49□□□□□ -1.37
GTF3C1-213ENST00000571886 PLA2G1BP04054 148 aaKnown RBP6.49□□□□□ -1.37
GTF3C1-213ENST00000571886 C2orf66Q6UXQ4 117 aa6.49□□□□□ -1.37
GTF3C1-213ENST00000571886 PACRGQ96M98 296 aaPredicted RBP6.49□□□□□ -1.37
GTF3C1-213ENST00000571886 HIST1H2BLQ99880 126 aa6.49□□□□□ -1.37
GTF3C1-213ENST00000571886 PYGO1Q9Y3Y4 419 aa6.49□□□□□ -1.37
GTF3C1-213ENST00000571886 HERC1Q15751 4861 aa6.49□□□□□ -1.37
GTF3C1-213ENST00000571886 A0A096LNI7 61 aa6.48□□□□□ -1.37
GTF3C1-213ENST00000571886 IGKV2-24A0A0C4DH68 120 aa6.48□□□□□ -1.37
GTF3C1-213ENST00000571886 ZNF561-AS1K7EIQ3 104 aa6.48□□□□□ -1.37
GTF3C1-213ENST00000571886 MT-ND6P03923 174 aa6.48□□□□□ -1.37
GTF3C1-213ENST00000571886 MALP21145 153 aa6.48□□□□□ -1.37
GTF3C1-213ENST00000571886 SYCNQ0VAF6 134 aa6.48□□□□□ -1.37
GTF3C1-213ENST00000571886 JOSD1Q15040 202 aaPredicted RBP6.48□□□□□ -1.37
GTF3C1-213ENST00000571886 PYY3Q5JQD4 70 aa6.48□□□□□ -1.37
GTF3C1-213ENST00000571886 Q6ZRU5 148 aa6.48□□□□□ -1.37
GTF3C1-213ENST00000571886 LINC00173Q6ZV60 143 aa6.48□□□□□ -1.37
GTF3C1-213ENST00000571886 DPH3Q96FX2 82 aa6.48□□□□□ -1.37
GTF3C1-213ENST00000571886 IGIPA6NJ69 53 aa6.47□□□□□ -1.37
GTF3C1-213ENST00000571886 FABP4P15090 132 aa6.47□□□□□ -1.37
GTF3C1-213ENST00000571886 HNRNPA3P51991 378 aaKnown RBP6.47□□□□□ -1.37
GTF3C1-213ENST00000571886 MAJINQ3KP22 176 aa6.47□□□□□ -1.37
GTF3C1-213ENST00000571886 LINC00242Q5T6M2 205 aa6.47□□□□□ -1.37
GTF3C1-213ENST00000571886 TMEM141Q96I45 108 aa6.47□□□□□ -1.37
GTF3C1-213ENST00000571886 CARD19Q96LW7 228 aa6.47□□□□□ -1.37
GTF3C1-213ENST00000571886 ALKBH7Q9BT30 221 aaPredicted RBP6.47□□□□□ -1.37
GTF3C1-213ENST00000571886 NXT2Q9NPJ8 142 aaKnown RBP6.47□□□□□ -1.37
GTF3C1-213ENST00000571886 A0A0J9YXV3 536 aa6.46□□□□□ -1.38
GTF3C1-213ENST00000571886 UBE2D1P51668 147 aa6.46□□□□□ -1.38
GTF3C1-213ENST00000571886 ORMDL2Q53FV1 153 aa6.46□□□□□ -1.38
GTF3C1-213ENST00000571886 AMELXQ99217 191 aa6.46□□□□□ -1.38
GTF3C1-213ENST00000571886 MRPL18Q9H0U6 180 aaKnown RBP6.46□□□□□ -1.38
GTF3C1-213ENST00000571886 PLAC8Q9NZF1 115 aa6.46□□□□□ -1.38
GTF3C1-213ENST00000571886 CYSLTR1Q9Y271 337 aa6.46□□□□□ -1.38
GTF3C1-213ENST00000571886 RPL37AP61513 92 aaKnown RBP6.45□□□□□ -1.38
GTF3C1-213ENST00000571886 SPAG11BQ08648 103 aa6.45□□□□□ -1.38
GTF3C1-213ENST00000571886 CAMK2N2Q96S95 79 aa6.45□□□□□ -1.38
GTF3C1-213ENST00000571886 LINC01546A6NGU7 62 aa6.44□□□□□ -1.38
GTF3C1-213ENST00000571886 K7EMI3 77 aa6.44□□□□□ -1.38
GTF3C1-213ENST00000571886 APOMO95445 188 aa6.44□□□□□ -1.38
GTF3C1-213ENST00000571886 KIAA0087Q14695 138 aa6.44□□□□□ -1.38
GTF3C1-213ENST00000571886 C10orf25Q5T742 122 aa6.44□□□□□ -1.38
GTF3C1-213ENST00000571886 TEX43Q6ZNM6 134 aa6.44□□□□□ -1.38
GTF3C1-213ENST00000571886 STPG4Q8N801 248 aa6.44□□□□□ -1.38
GTF3C1-213ENST00000571886 ORAOV1Q8WV07 137 aa6.44□□□□□ -1.38
GTF3C1-213ENST00000571886 TOMM6Q96B49 74 aa6.44□□□□□ -1.38
GTF3C1-213ENST00000571886 C2orf48Q96LS8 159 aa6.44□□□□□ -1.38
GTF3C1-213ENST00000571886 PKHD1L1Q86WI1 4243 aa6.44□□□□□ -1.38
GTF3C1-213ENST00000571886 A0A087WZ39 114 aa6.43□□□□□ -1.38
GTF3C1-213ENST00000571886 LINC00587B1AMM8 73 aa6.43□□□□□ -1.38
GTF3C1-213ENST00000571886 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.43□□□□□ -1.38
GTF3C1-213ENST00000571886 UNQ6190/PRO20217Q6UXQ8 127 aa6.43□□□□□ -1.38
GTF3C1-213ENST00000571886 URB1-AS1Q96HZ7 61 aa6.43□□□□□ -1.38
GTF3C1-213ENST00000571886 VCX2Q9H322 139 aa6.43□□□□□ -1.38
GTF3C1-213ENST00000571886 DMBT1Q9UGM3 2413 aaPredicted RBP6.42□□□□□ -1.38
GTF3C1-213ENST00000571886 A0A1W2PNN7 141 aa6.42□□□□□ -1.38
GTF3C1-213ENST00000571886 PTTG1IPP53801 180 aa6.42□□□□□ -1.38
GTF3C1-213ENST00000571886 GAGE2BQ13066 116 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms