RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 SMAGPQ0VAQ4 97 aa9.02□□□□□ -0.97
CIITA-205ENST00000571186 ODF1Q14990 250 aa9.02□□□□□ -0.97
CIITA-205ENST00000571186 LINC01600Q96MT4 127 aa9.02□□□□□ -0.97
CIITA-205ENST00000571186 IFI27P40305 119 aaPredicted RBP9.01□□□□□ -0.97
CIITA-205ENST00000571186 COX6A2Q02221 97 aa9.01□□□□□ -0.97
CIITA-205ENST00000571186 CFAP161Q6P656 301 aa9.01□□□□□ -0.97
CIITA-205ENST00000571186 LINC00526Q96FQ7 95 aa9.01□□□□□ -0.97
CIITA-205ENST00000571186 TGIF2-C20orf24A0A0A6YYL0 155 aa9□□□□□ -0.97
CIITA-205ENST00000571186 MAJINQ3KP22 176 aa9□□□□□ -0.97
CIITA-205ENST00000571186 CD164L2Q6UWJ8 174 aa9□□□□□ -0.97
CIITA-205ENST00000571186 GNB1LQ9BYB4 327 aa9□□□□□ -0.97
CIITA-205ENST00000571186 SPANXA1Q9NS26 97 aa9□□□□□ -0.97
CIITA-205ENST00000571186 C1orf196B1AJZ1 125 aa8.99□□□□□ -0.97
CIITA-205ENST00000571186 IGLV4-3A0A075B6K6 122 aa8.98□□□□□ -0.97
CIITA-205ENST00000571186 GVQW2A0A096LPI5 108 aaPredicted RBP8.98□□□□□ -0.97
CIITA-205ENST00000571186 IGKV2-24A0A0C4DH68 120 aa8.98□□□□□ -0.97
CIITA-205ENST00000571186 MRPS36P82909 103 aaKnown RBP8.98□□□□□ -0.97
CIITA-205ENST00000571186 ZC2HC1BQ5TFG8 222 aa8.98□□□□□ -0.97
CIITA-205ENST00000571186 C5orf38Q86SI9 138 aa8.98□□□□□ -0.97
CIITA-205ENST00000571186 PRSS3P2Q8NHM4 247 aa8.98□□□□□ -0.97
CIITA-205ENST00000571186 ALKBH7Q9BT30 221 aaPredicted RBP8.98□□□□□ -0.97
CIITA-205ENST00000571186 MRPL18Q9H0U6 180 aaKnown RBP8.98□□□□□ -0.97
CIITA-205ENST00000571186 IGHV1-58A0A0C4DH39 117 aa8.97□□□□□ -0.97
CIITA-205ENST00000571186 IFITM10A6NMD0 228 aa8.97□□□□□ -0.97
CIITA-205ENST00000571186 SNAPINO95295 136 aa8.97□□□□□ -0.97
CIITA-205ENST00000571186 FABP9Q0Z7S8 132 aa8.97□□□□□ -0.97
CIITA-205ENST00000571186 NDUFA5Q16718 116 aa8.97□□□□□ -0.97
CIITA-205ENST00000571186 C2orf66Q6UXQ4 117 aa8.97□□□□□ -0.97
CIITA-205ENST00000571186 SLC7A5P1Q8MH63 180 aa8.97□□□□□ -0.97
CIITA-205ENST00000571186 SVBPQ8N300 66 aa8.97□□□□□ -0.97
CIITA-205ENST00000571186 STPG4Q8N801 248 aa8.97□□□□□ -0.97
CIITA-205ENST00000571186 NXT2Q9NPJ8 142 aaKnown RBP8.97□□□□□ -0.97
CIITA-205ENST00000571186 COX7A2LO14548 114 aa8.96□□□□□ -0.98
CIITA-205ENST00000571186 PRR3P79522 188 aaKnown RBP8.96□□□□□ -0.98
CIITA-205ENST00000571186 ORMDL2Q53FV1 153 aa8.96□□□□□ -0.98
CIITA-205ENST00000571186 CYSLTR1Q9Y271 337 aa8.96□□□□□ -0.98
CIITA-205ENST00000571186 PYGO1Q9Y3Y4 419 aa8.96□□□□□ -0.98
CIITA-205ENST00000571186 A0A0J9YXV3 536 aa8.95□□□□□ -0.98
CIITA-205ENST00000571186 MALP21145 153 aa8.95□□□□□ -0.98
CIITA-205ENST00000571186 KRTAP10-8P60410 259 aa8.94□□□□□ -0.98
CIITA-205ENST00000571186 COX19Q49B96 90 aa8.94□□□□□ -0.98
CIITA-205ENST00000571186 REG3GQ6UW15 175 aa8.94□□□□□ -0.98
CIITA-205ENST00000571186 TMEM141Q96I45 108 aa8.94□□□□□ -0.98
CIITA-205ENST00000571186 IGLV4-69A0A075B6H9 119 aa8.93□□□□□ -0.98
CIITA-205ENST00000571186 IGIPA6NJ69 53 aa8.93□□□□□ -0.98
CIITA-205ENST00000571186 MT-ND6P03923 174 aa8.93□□□□□ -0.98
CIITA-205ENST00000571186 SPINK6Q6UWN8 80 aa8.93□□□□□ -0.98
CIITA-205ENST00000571186 LINC00173Q6ZV60 143 aa8.93□□□□□ -0.98
CIITA-205ENST00000571186 TRAPPC1Q9Y5R8 145 aa8.93□□□□□ -0.98
CIITA-205ENST00000571186 IGHV3OR16-9A0A0B4J2B5 98 aa8.92□□□□□ -0.98
CIITA-205ENST00000571186 ZNF561-AS1K7EIQ3 104 aa8.92□□□□□ -0.98
CIITA-205ENST00000571186 K7EMI3 77 aa8.92□□□□□ -0.98
CIITA-205ENST00000571186 LINC00242Q5T6M2 205 aa8.92□□□□□ -0.98
CIITA-205ENST00000571186 TEX43Q6ZNM6 134 aa8.92□□□□□ -0.98
CIITA-205ENST00000571186 YPEL4Q96NS1 127 aa8.92□□□□□ -0.98
CIITA-205ENST00000571186 A0A096LNI7 61 aa8.91□□□□□ -0.98
CIITA-205ENST00000571186 TOMM6Q96B49 74 aa8.91□□□□□ -0.98
CIITA-205ENST00000571186 CARD19Q96LW7 228 aa8.91□□□□□ -0.98
CIITA-205ENST00000571186 AMELXQ99217 191 aa8.91□□□□□ -0.98
CIITA-205ENST00000571186 LINC01546A6NGU7 62 aa8.9□□□□□ -0.98
CIITA-205ENST00000571186 UBE2D1P51668 147 aa8.9□□□□□ -0.98
CIITA-205ENST00000571186 SYCNQ0VAF6 134 aa8.9□□□□□ -0.98
CIITA-205ENST00000571186 CBLN2Q8IUK8 224 aa8.9□□□□□ -0.98
CIITA-205ENST00000571186 VCX2Q9H322 139 aa8.9□□□□□ -0.98
CIITA-205ENST00000571186 SPAG11BQ08648 103 aa8.89□□□□□ -0.99
CIITA-205ENST00000571186 Q6ZN92 141 aa8.89□□□□□ -0.99
CIITA-205ENST00000571186 FA2HQ7L5A8 372 aa8.89□□□□□ -0.99
CIITA-205ENST00000571186 ORAOV1Q8WV07 137 aa8.89□□□□□ -0.99
CIITA-205ENST00000571186 URB1-AS1Q96HZ7 61 aa8.89□□□□□ -0.99
CIITA-205ENST00000571186 LINC00474Q9P2X8 69 aa8.89□□□□□ -0.99
CIITA-205ENST00000571186 APOMO95445 188 aa8.88□□□□□ -0.99
CIITA-205ENST00000571186 SRSF9Q13242 221 aaKnown RBP eCLIP8.88□□□□□ -0.99
CIITA-205ENST00000571186 C18orf32Q8TCD1 76 aa8.88□□□□□ -0.99
CIITA-205ENST00000571186 SCGB3A1Q96QR1 104 aa8.88□□□□□ -0.99
CIITA-205ENST00000571186 CAMK2N2Q96S95 79 aa8.88□□□□□ -0.99
CIITA-205ENST00000571186 C2orf88Q9BSF0 95 aa8.88□□□□□ -0.99
CIITA-205ENST00000571186 Q6ZRP5 223 aa8.87□□□□□ -0.99
CIITA-205ENST00000571186 TIMM17AQ99595 171 aa8.87□□□□□ -0.99
CIITA-205ENST00000571186 SMCO4Q9NRQ5 59 aa8.87□□□□□ -0.99
CIITA-205ENST00000571186 A0A087WZ39 114 aa8.86□□□□□ -0.99
CIITA-205ENST00000571186 NPSP0C0P6 89 aa8.86□□□□□ -0.99
CIITA-205ENST00000571186 G0S2P27469 103 aa8.86□□□□□ -0.99
CIITA-205ENST00000571186 ERASQ7Z444 233 aa8.86□□□□□ -0.99
CIITA-205ENST00000571186 OR10D4PQ8NGN7 298 aa8.86□□□□□ -0.99
CIITA-205ENST00000571186 PKIGQ9Y2B9 76 aa8.86□□□□□ -0.99
CIITA-205ENST00000571186 A0A096LNJ9 63 aa8.85□□□□□ -0.99
CIITA-205ENST00000571186 PMCHL1Q16048 86 aa8.85□□□□□ -0.99
CIITA-205ENST00000571186 C10orf25Q5T742 122 aa8.85□□□□□ -0.99
CIITA-205ENST00000571186 C2orf48Q96LS8 159 aa8.85□□□□□ -0.99
CIITA-205ENST00000571186 LINC00614P0C842 121 aa8.84□□□□□ -0.99
CIITA-205ENST00000571186 UNQ6190/PRO20217Q6UXQ8 127 aa8.84□□□□□ -0.99
CIITA-205ENST00000571186 FAM19A3Q7Z5A8 133 aa8.84□□□□□ -0.99
CIITA-205ENST00000571186 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.83□□□□□ -1
CIITA-205ENST00000571186 GAGE2BQ13066 116 aa8.83□□□□□ -1
CIITA-205ENST00000571186 KIAA0087Q14695 138 aa8.83□□□□□ -1
CIITA-205ENST00000571186 PAPPA-AS1Q5QFB9 102 aa8.83□□□□□ -1
CIITA-205ENST00000571186 LPAP08519 4548 aa8.82□□□□□ -1
CIITA-205ENST00000571186 LOC107984640A0A0U1RRK4 108 aa8.82□□□□□ -1
CIITA-205ENST00000571186 C2orf82Q6UX34 121 aa8.82□□□□□ -1
CIITA-205ENST00000571186 CDKN2A-AS1Q9UH64 79 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms