RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 CDC42SE2Q9NRR3 84 aa7.86□□□□□ -1.15
CTDNEP1-205ENST00000570828 FAT3Q8TDW7 4589 aa7.85□□□□□ -1.15
CTDNEP1-205ENST00000570828 IGKV2-24A0A0C4DH68 120 aa7.85□□□□□ -1.15
CTDNEP1-205ENST00000570828 HNRNPA3P51991 378 aaKnown RBP7.85□□□□□ -1.15
CTDNEP1-205ENST00000570828 MRPL51Q4U2R6 128 aaKnown RBP7.85□□□□□ -1.15
CTDNEP1-205ENST00000570828 CD164L2Q6UWJ8 174 aa7.85□□□□□ -1.15
CTDNEP1-205ENST00000570828 PKIGQ9Y2B9 76 aa7.85□□□□□ -1.15
CTDNEP1-205ENST00000570828 PKHD1L1Q86WI1 4243 aa7.84□□□□□ -1.15
CTDNEP1-205ENST00000570828 LINC00862A6NCI5 91 aa7.84□□□□□ -1.15
CTDNEP1-205ENST00000570828 C5orf52A6NGY3 159 aa7.84□□□□□ -1.15
CTDNEP1-205ENST00000570828 S100A8P05109 93 aa7.84□□□□□ -1.15
CTDNEP1-205ENST00000570828 C7orf33Q8WU49 177 aa7.84□□□□□ -1.15
CTDNEP1-205ENST00000570828 TMEM18Q96B42 140 aa7.84□□□□□ -1.15
CTDNEP1-205ENST00000570828 CARD19Q96LW7 228 aa7.84□□□□□ -1.15
CTDNEP1-205ENST00000570828 PLAC8Q9NZF1 115 aa7.84□□□□□ -1.15
CTDNEP1-205ENST00000570828 F8W036 122 aa7.83□□□□□ -1.16
CTDNEP1-205ENST00000570828 CKS2P33552 79 aa7.83□□□□□ -1.16
CTDNEP1-205ENST00000570828 HBBP68871 147 aa7.83□□□□□ -1.16
CTDNEP1-205ENST00000570828 MRPL54Q6P161 138 aaKnown RBP7.83□□□□□ -1.16
CTDNEP1-205ENST00000570828 PRSS3P2Q8NHM4 247 aa7.83□□□□□ -1.16
CTDNEP1-205ENST00000570828 C20orf78Q9BR46 151 aa7.83□□□□□ -1.16
CTDNEP1-205ENST00000570828 UBE2D4Q9Y2X8 147 aa7.83□□□□□ -1.16
CTDNEP1-205ENST00000570828 CSDC2Q9Y534 153 aaKnown RBP7.83□□□□□ -1.16
CTDNEP1-205ENST00000570828 C1orf196B1AJZ1 125 aa7.82□□□□□ -1.16
CTDNEP1-205ENST00000570828 TCAPO15273 167 aa7.82□□□□□ -1.16
CTDNEP1-205ENST00000570828 RNASE13Q5GAN3 156 aaKnown RBP7.82□□□□□ -1.16
CTDNEP1-205ENST00000570828 LINC00526Q96FQ7 95 aa7.82□□□□□ -1.16
CTDNEP1-205ENST00000570828 LINC00474Q9P2X8 69 aa7.82□□□□□ -1.16
CTDNEP1-205ENST00000570828 TRBV24-1A0A075B6N3 115 aa7.81□□□□□ -1.16
CTDNEP1-205ENST00000570828 A0A096LNI7 61 aa7.81□□□□□ -1.16
CTDNEP1-205ENST00000570828 TRAV13-1A0A0B4J241 112 aa7.81□□□□□ -1.16
CTDNEP1-205ENST00000570828 D6R8Y8 96 aa7.81□□□□□ -1.16
CTDNEP1-205ENST00000570828 COX7A2LO14548 114 aa7.81□□□□□ -1.16
CTDNEP1-205ENST00000570828 PHOX2AO14813 284 aa7.81□□□□□ -1.16
CTDNEP1-205ENST00000570828 RPL32P62910 135 aaKnown RBP7.81□□□□□ -1.16
CTDNEP1-205ENST00000570828 Q6ZUT4 128 aa7.81□□□□□ -1.16
CTDNEP1-205ENST00000570828 STPG4Q8N801 248 aa7.81□□□□□ -1.16
CTDNEP1-205ENST00000570828 A0A1B0GXF2 115 aa7.8□□□□□ -1.16
CTDNEP1-205ENST00000570828 SYCNQ0VAF6 134 aa7.8□□□□□ -1.16
CTDNEP1-205ENST00000570828 SERTAD4-AS1Q5TG53 156 aa7.8□□□□□ -1.16
CTDNEP1-205ENST00000570828 TIMM21Q9BVV7 248 aa7.8□□□□□ -1.16
CTDNEP1-205ENST00000570828 SMIM2Q9BVW6 85 aa7.8□□□□□ -1.16
CTDNEP1-205ENST00000570828 PPBPP02775 128 aa7.79□□□□□ -1.16
CTDNEP1-205ENST00000570828 Q6ZRU5 148 aa7.79□□□□□ -1.16
CTDNEP1-205ENST00000570828 ATP5L2Q7Z4Y8 100 aa7.78□□□□□ -1.16
CTDNEP1-205ENST00000570828 SPANXA1Q9NS26 97 aa7.78□□□□□ -1.16
CTDNEP1-205ENST00000570828 HMCN2Q8NDA2 5059 aa7.77□□□□□ -1.17
CTDNEP1-205ENST00000570828 IGLV4-69A0A075B6H9 119 aa7.77□□□□□ -1.17
CTDNEP1-205ENST00000570828 H0Y8G0 127 aa7.77□□□□□ -1.17
CTDNEP1-205ENST00000570828 APOMO95445 188 aa7.77□□□□□ -1.17
CTDNEP1-205ENST00000570828 NPYP01303 97 aa7.77□□□□□ -1.17
CTDNEP1-205ENST00000570828 RPL39P62891 51 aaKnown RBP7.77□□□□□ -1.17
CTDNEP1-205ENST00000570828 CLLU1Q5K131 121 aa7.77□□□□□ -1.17
CTDNEP1-205ENST00000570828 C5orf38Q86SI9 138 aa7.77□□□□□ -1.17
CTDNEP1-205ENST00000570828 ORMDL3Q8N138 153 aa7.77□□□□□ -1.17
CTDNEP1-205ENST00000570828 CAMK2N2Q96S95 79 aa7.77□□□□□ -1.17
CTDNEP1-205ENST00000570828 LOC107984640A0A0U1RRK4 108 aa7.76□□□□□ -1.17
CTDNEP1-205ENST00000570828 PRR3P79522 188 aaKnown RBP7.76□□□□□ -1.17
CTDNEP1-205ENST00000570828 RAB5AP20339 215 aa7.75□□□□□ -1.17
CTDNEP1-205ENST00000570828 SPAG11BQ08648 103 aa7.75□□□□□ -1.17
CTDNEP1-205ENST00000570828 PNRC1Q12796 327 aaPredicted RBP7.75□□□□□ -1.17
CTDNEP1-205ENST00000570828 C2orf48Q96LS8 159 aa7.75□□□□□ -1.17
CTDNEP1-205ENST00000570828 PRELID3AQ96N28 172 aa7.75□□□□□ -1.17
CTDNEP1-205ENST00000570828 LOC105371267A0A1B0GV96 52 aa7.74□□□□□ -1.17
CTDNEP1-205ENST00000570828 IFITM10A6NMD0 228 aa7.74□□□□□ -1.17
CTDNEP1-205ENST00000570828 B5MCH6 92 aa7.74□□□□□ -1.17
CTDNEP1-205ENST00000570828 MT-ND4LP03901 98 aa7.74□□□□□ -1.17
CTDNEP1-205ENST00000570828 MRPS36P82909 103 aaKnown RBP7.74□□□□□ -1.17
CTDNEP1-205ENST00000570828 GAGE2BQ13066 116 aa7.74□□□□□ -1.17
CTDNEP1-205ENST00000570828 TMEM136Q6ZRR5 245 aa7.74□□□□□ -1.17
CTDNEP1-205ENST00000570828 OR10D4PQ8NGN7 298 aa7.74□□□□□ -1.17
CTDNEP1-205ENST00000570828 IFI27P40305 119 aaPredicted RBP7.73□□□□□ -1.17
CTDNEP1-205ENST00000570828 ORAOV1Q8WV07 137 aa7.73□□□□□ -1.17
CTDNEP1-205ENST00000570828 OPRPNQ99935 248 aaPredicted RBP7.73□□□□□ -1.17
CTDNEP1-205ENST00000570828 MT1HL1P0DM35 61 aa7.72□□□□□ -1.17
CTDNEP1-205ENST00000570828 RPL18AQ02543 176 aaKnown RBP7.72□□□□□ -1.17
CTDNEP1-205ENST00000570828 COMMD7Q86VX2 200 aa7.72□□□□□ -1.17
CTDNEP1-205ENST00000570828 MAP1LC3AQ9H492 121 aa7.72□□□□□ -1.17
CTDNEP1-205ENST00000570828 LAMTOR2Q9Y2Q5 125 aa7.72□□□□□ -1.17
CTDNEP1-205ENST00000570828 TGIF2-C20orf24A0A0A6YYL0 155 aa7.71□□□□□ -1.18
CTDNEP1-205ENST00000570828 IGHV3OR16-9A0A0B4J2B5 98 aa7.71□□□□□ -1.18
CTDNEP1-205ENST00000570828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.71□□□□□ -1.18
CTDNEP1-205ENST00000570828 FAM104AQ969W3 186 aa7.71□□□□□ -1.18
CTDNEP1-205ENST00000570828 LOC389332A0A1B0GUA5 103 aa7.7□□□□□ -1.18
CTDNEP1-205ENST00000570828 Q6ZRP5 223 aa7.7□□□□□ -1.18
CTDNEP1-205ENST00000570828 VCX2Q9H322 139 aa7.7□□□□□ -1.18
CTDNEP1-205ENST00000570828 PYGO1Q9Y3Y4 419 aa7.7□□□□□ -1.18
CTDNEP1-205ENST00000570828 IGLV4-3A0A075B6K6 122 aa7.69□□□□□ -1.18
CTDNEP1-205ENST00000570828 A0A0J9YXV3 536 aa7.69□□□□□ -1.18
CTDNEP1-205ENST00000570828 NDUFA1O15239 70 aa7.69□□□□□ -1.18
CTDNEP1-205ENST00000570828 RNF151Q2KHN1 245 aa7.69□□□□□ -1.18
CTDNEP1-205ENST00000570828 TMEM141Q96I45 108 aa7.69□□□□□ -1.18
CTDNEP1-205ENST00000570828 MRPL35Q9NZE8 188 aaKnown RBP7.69□□□□□ -1.18
CTDNEP1-205ENST00000570828 C9orf116Q5BN46 136 aaPredicted RBP7.68□□□□□ -1.18
CTDNEP1-205ENST00000570828 SPINK6Q6UWN8 80 aa7.68□□□□□ -1.18
CTDNEP1-205ENST00000570828 Q6ZN92 141 aa7.68□□□□□ -1.18
CTDNEP1-205ENST00000570828 TEX43Q6ZNM6 134 aa7.68□□□□□ -1.18
CTDNEP1-205ENST00000570828 IMMP2LQ96T52 175 aa7.68□□□□□ -1.18
CTDNEP1-205ENST00000570828 C2orf88Q9BSF0 95 aa7.68□□□□□ -1.18
CTDNEP1-205ENST00000570828 CYSLTR1Q9Y271 337 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms