RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 IFITM10A6NMD0 228 aa8.27□□□□□ -1.09
CNOT1-220ENST00000569916 IGLV4-69A0A075B6H9 119 aa8.26□□□□□ -1.09
CNOT1-220ENST00000569916 A0A096LNI7 61 aa8.26□□□□□ -1.09
CNOT1-220ENST00000569916 IGKV2-24A0A0C4DH68 120 aa8.26□□□□□ -1.09
CNOT1-220ENST00000569916 S100PP25815 95 aa8.26□□□□□ -1.09
CNOT1-220ENST00000569916 RPL37AP61513 92 aaKnown RBP8.26□□□□□ -1.09
CNOT1-220ENST00000569916 SYCNQ0VAF6 134 aa8.26□□□□□ -1.09
CNOT1-220ENST00000569916 KIAA1644Q3SXP7 199 aa8.26□□□□□ -1.09
CNOT1-220ENST00000569916 C2orf66Q6UXQ4 117 aa8.26□□□□□ -1.09
CNOT1-220ENST00000569916 PLAC8Q9NZF1 115 aa8.26□□□□□ -1.09
CNOT1-220ENST00000569916 CYSLTR1Q9Y271 337 aa8.26□□□□□ -1.09
CNOT1-220ENST00000569916 IGHV3OR16-9A0A0B4J2B5 98 aa8.25□□□□□ -1.09
CNOT1-220ENST00000569916 K7EMI3 77 aa8.25□□□□□ -1.09
CNOT1-220ENST00000569916 RHEBQ15382 184 aa8.25□□□□□ -1.09
CNOT1-220ENST00000569916 ORMDL2Q53FV1 153 aa8.25□□□□□ -1.09
CNOT1-220ENST00000569916 TMEM141Q96I45 108 aa8.25□□□□□ -1.09
CNOT1-220ENST00000569916 NXT2Q9NPJ8 142 aaKnown RBP8.25□□□□□ -1.09
CNOT1-220ENST00000569916 APOMO95445 188 aa8.24□□□□□ -1.09
CNOT1-220ENST00000569916 SPAG11BQ08648 103 aa8.24□□□□□ -1.09
CNOT1-220ENST00000569916 MAJINQ3KP22 176 aa8.24□□□□□ -1.09
CNOT1-220ENST00000569916 Q6ZRU5 148 aa8.24□□□□□ -1.09
CNOT1-220ENST00000569916 DPH3Q96FX2 82 aa8.24□□□□□ -1.09
CNOT1-220ENST00000569916 GNB1LQ9BYB4 327 aa8.24□□□□□ -1.09
CNOT1-220ENST00000569916 RPS10P5Q9NQ39 176 aa8.24□□□□□ -1.09
CNOT1-220ENST00000569916 PKIGQ9Y2B9 76 aa8.24□□□□□ -1.09
CNOT1-220ENST00000569916 HERC1Q15751 4861 aa8.24□□□□□ -1.09
CNOT1-220ENST00000569916 LINC00173Q6ZV60 143 aa8.23□□□□□ -1.09
CNOT1-220ENST00000569916 OR10D4PQ8NGN7 298 aa8.23□□□□□ -1.09
CNOT1-220ENST00000569916 C2orf48Q96LS8 159 aa8.23□□□□□ -1.09
CNOT1-220ENST00000569916 CAMK2N2Q96S95 79 aa8.23□□□□□ -1.09
CNOT1-220ENST00000569916 TGIF2-C20orf24A0A0A6YYL0 155 aa8.22□□□□□ -1.09
CNOT1-220ENST00000569916 HNRNPA3P51991 378 aaKnown RBP8.22□□□□□ -1.09
CNOT1-220ENST00000569916 LINC00242Q5T6M2 205 aa8.22□□□□□ -1.09
CNOT1-220ENST00000569916 TEX43Q6ZNM6 134 aa8.22□□□□□ -1.09
CNOT1-220ENST00000569916 STPG4Q8N801 248 aa8.22□□□□□ -1.09
CNOT1-220ENST00000569916 ORAOV1Q8WV07 137 aa8.22□□□□□ -1.09
CNOT1-220ENST00000569916 AMELXQ99217 191 aa8.22□□□□□ -1.09
CNOT1-220ENST00000569916 DMBT1Q9UGM3 2413 aaPredicted RBP8.22□□□□□ -1.09
CNOT1-220ENST00000569916 TMEM238LA0A1B0GVL6 79 aa8.21□□□□□ -1.1
CNOT1-220ENST00000569916 IGIPA6NJ69 53 aa8.21□□□□□ -1.1
CNOT1-220ENST00000569916 ATP6V1G1O75348 118 aa8.21□□□□□ -1.1
CNOT1-220ENST00000569916 NPSP0C0P6 89 aa8.21□□□□□ -1.1
CNOT1-220ENST00000569916 UBE2D1P51668 147 aa8.21□□□□□ -1.1
CNOT1-220ENST00000569916 COX19Q49B96 90 aa8.21□□□□□ -1.1
CNOT1-220ENST00000569916 ZC2HC1BQ5TFG8 222 aa8.21□□□□□ -1.1
CNOT1-220ENST00000569916 ALKBH7Q9BT30 221 aaPredicted RBP8.21□□□□□ -1.1
CNOT1-220ENST00000569916 LINC00474Q9P2X8 69 aa8.21□□□□□ -1.1
CNOT1-220ENST00000569916 FAT3Q8TDW7 4589 aa8.21□□□□□ -1.1
CNOT1-220ENST00000569916 A0A087WZ39 114 aa8.2□□□□□ -1.1
CNOT1-220ENST00000569916 LOC107984640A0A0U1RRK4 108 aa8.2□□□□□ -1.1
CNOT1-220ENST00000569916 KRTAP29-1A8MX34 341 aaPredicted RBP8.2□□□□□ -1.1
CNOT1-220ENST00000569916 GHRHP01286 108 aa8.2□□□□□ -1.1
CNOT1-220ENST00000569916 MT-ND6P03923 174 aa8.2□□□□□ -1.1
CNOT1-220ENST00000569916 PTTG1IPP53801 180 aa8.2□□□□□ -1.1
CNOT1-220ENST00000569916 Q6ZN92 141 aa8.2□□□□□ -1.1
CNOT1-220ENST00000569916 C2orf88Q9BSF0 95 aa8.2□□□□□ -1.1
CNOT1-220ENST00000569916 MRPL18Q9H0U6 180 aaKnown RBP8.2□□□□□ -1.1
CNOT1-220ENST00000569916 LRP1Q07954 4544 aaKnown RBP8.2□□□□□ -1.1
CNOT1-220ENST00000569916 LINC01546A6NGU7 62 aa8.19□□□□□ -1.1
CNOT1-220ENST00000569916 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.19□□□□□ -1.1
CNOT1-220ENST00000569916 TOMM6Q96B49 74 aa8.19□□□□□ -1.1
CNOT1-220ENST00000569916 TIMM17AQ99595 171 aa8.19□□□□□ -1.1
CNOT1-220ENST00000569916 F8WDY8 70 aa8.18□□□□□ -1.1
CNOT1-220ENST00000569916 APOC3P02656 99 aa8.18□□□□□ -1.1
CNOT1-220ENST00000569916 G0S2P27469 103 aa8.18□□□□□ -1.1
CNOT1-220ENST00000569916 GAGE2BQ13066 116 aa8.18□□□□□ -1.1
CNOT1-220ENST00000569916 RNF151Q2KHN1 245 aa8.18□□□□□ -1.1
CNOT1-220ENST00000569916 FAM19A3Q7Z5A8 133 aa8.18□□□□□ -1.1
CNOT1-220ENST00000569916 C7orf33Q8WU49 177 aa8.18□□□□□ -1.1
CNOT1-220ENST00000569916 VCX2Q9H322 139 aa8.18□□□□□ -1.1
CNOT1-220ENST00000569916 MRPL35Q9NZE8 188 aaKnown RBP8.18□□□□□ -1.1
CNOT1-220ENST00000569916 A0A0J9YXV3 536 aa8.17□□□□□ -1.1
CNOT1-220ENST00000569916 NDUFA1O15239 70 aa8.17□□□□□ -1.1
CNOT1-220ENST00000569916 FABP9Q0Z7S8 132 aa8.17□□□□□ -1.1
CNOT1-220ENST00000569916 KIAA0087Q14695 138 aa8.17□□□□□ -1.1
CNOT1-220ENST00000569916 NDUFA5Q16718 116 aa8.17□□□□□ -1.1
CNOT1-220ENST00000569916 C10orf25Q5T742 122 aa8.17□□□□□ -1.1
CNOT1-220ENST00000569916 SNAPINO95295 136 aa8.16□□□□□ -1.1
CNOT1-220ENST00000569916 RPL18AQ02543 176 aaKnown RBP8.16□□□□□ -1.1
CNOT1-220ENST00000569916 PAPPA-AS1Q5QFB9 102 aa8.16□□□□□ -1.1
CNOT1-220ENST00000569916 UNQ6190/PRO20217Q6UXQ8 127 aa8.16□□□□□ -1.1
CNOT1-220ENST00000569916 LINC01561Q8N1V8 128 aa8.16□□□□□ -1.1
CNOT1-220ENST00000569916 SVBPQ8N300 66 aa8.16□□□□□ -1.1
CNOT1-220ENST00000569916 ERASQ7Z444 233 aa8.15□□□□□ -1.1
CNOT1-220ENST00000569916 SCGB3A1Q96QR1 104 aa8.15□□□□□ -1.1
CNOT1-220ENST00000569916 C6orf48Q9UBA6 75 aa8.15□□□□□ -1.1
CNOT1-220ENST00000569916 OXTP01178 125 aa8.14□□□□□ -1.11
CNOT1-220ENST00000569916 PRR3P79522 188 aaKnown RBP8.14□□□□□ -1.11
CNOT1-220ENST00000569916 FA2HQ7L5A8 372 aa8.14□□□□□ -1.11
CNOT1-220ENST00000569916 A0A1W2PNN7 141 aa8.13□□□□□ -1.11
CNOT1-220ENST00000569916 LINC01549A6NIU2 74 aa8.13□□□□□ -1.11
CNOT1-220ENST00000569916 TLX1NBP0CAT3 122 aa8.13□□□□□ -1.11
CNOT1-220ENST00000569916 HERVK_113P63121 156 aa8.13□□□□□ -1.11
CNOT1-220ENST00000569916 SEC11AP67812 179 aa8.13□□□□□ -1.11
CNOT1-220ENST00000569916 SMCO4Q9NRQ5 59 aa8.13□□□□□ -1.11
CNOT1-220ENST00000569916 TRAPPC1Q9Y5R8 145 aa8.13□□□□□ -1.11
CNOT1-220ENST00000569916 C9orf116Q5BN46 136 aaPredicted RBP8.12□□□□□ -1.11
CNOT1-220ENST00000569916 C2orf82Q6UX34 121 aa8.12□□□□□ -1.11
CNOT1-220ENST00000569916 Q6ZRP5 223 aa8.12□□□□□ -1.11
CNOT1-220ENST00000569916 C18orf32Q8TCD1 76 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms