RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 C5orf38Q86SI9 138 aa18.52■□□□□ 0.56
RAB40C-211ENST00000568586 C2orf48Q96LS8 159 aa18.52■□□□□ 0.56
RAB40C-211ENST00000568586 MAP1LC3AQ9H492 121 aa18.52■□□□□ 0.56
RAB40C-211ENST00000568586 CTDSP1Q9GZU7 261 aa18.51■□□□□ 0.55
RAB40C-211ENST00000568586 APOMO95445 188 aa18.5■□□□□ 0.55
RAB40C-211ENST00000568586 Q8N8P6 123 aa18.5■□□□□ 0.55
RAB40C-211ENST00000568586 IFI27P40305 119 aaPredicted RBP18.49■□□□□ 0.55
RAB40C-211ENST00000568586 STPG4Q8N801 248 aa18.49■□□□□ 0.55
RAB40C-211ENST00000568586 LOC389332A0A1B0GUA5 103 aa18.48■□□□□ 0.55
RAB40C-211ENST00000568586 Q6ZRU5 148 aa18.48■□□□□ 0.55
RAB40C-211ENST00000568586 IFITM10A6NMD0 228 aa18.47■□□□□ 0.55
RAB40C-211ENST00000568586 K7EMI3 77 aa18.47■□□□□ 0.55
RAB40C-211ENST00000568586 OR10D4PQ8NGN7 298 aa18.47■□□□□ 0.55
RAB40C-211ENST00000568586 SEC11CQ9BY50 192 aa18.47■□□□□ 0.55
RAB40C-211ENST00000568586 IGLV4-3A0A075B6K6 122 aa18.46■□□□□ 0.55
RAB40C-211ENST00000568586 TRAV9-1A0A075B6T8 112 aa18.46■□□□□ 0.55
RAB40C-211ENST00000568586 C7orf33Q8WU49 177 aa18.46■□□□□ 0.55
RAB40C-211ENST00000568586 CAMK2N2Q96S95 79 aa18.45■□□□□ 0.54
RAB40C-211ENST00000568586 LOC107984640A0A0U1RRK4 108 aa18.43■□□□□ 0.54
RAB40C-211ENST00000568586 F8WDY8 70 aa18.43■□□□□ 0.54
RAB40C-211ENST00000568586 PTTG1IPP53801 180 aa18.43■□□□□ 0.54
RAB40C-211ENST00000568586 RNF151Q2KHN1 245 aa18.43■□□□□ 0.54
RAB40C-211ENST00000568586 TMEM141Q96I45 108 aa18.43■□□□□ 0.54
RAB40C-211ENST00000568586 SPAG11BQ08648 103 aa18.42■□□□□ 0.54
RAB40C-211ENST00000568586 ORMDL2Q53FV1 153 aa18.42■□□□□ 0.54
RAB40C-211ENST00000568586 CYSLTR1Q9Y271 337 aa18.42■□□□□ 0.54
RAB40C-211ENST00000568586 NPSP0C0P6 89 aa18.41■□□□□ 0.54
RAB40C-211ENST00000568586 LINC00242Q5T6M2 205 aa18.41■□□□□ 0.54
RAB40C-211ENST00000568586 C2orf66Q6UXQ4 117 aa18.41■□□□□ 0.54
RAB40C-211ENST00000568586 NXT2Q9NPJ8 142 aaKnown RBP18.41■□□□□ 0.54
RAB40C-211ENST00000568586 A0A087WZ39 114 aa18.39■□□□□ 0.53
RAB40C-211ENST00000568586 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.39■□□□□ 0.53
RAB40C-211ENST00000568586 C10orf91Q5T1B1 145 aa18.39■□□□□ 0.53
RAB40C-211ENST00000568586 ORAOV1Q8WV07 137 aa18.39■□□□□ 0.53
RAB40C-211ENST00000568586 AMELXQ99217 191 aa18.38■□□□□ 0.53
RAB40C-211ENST00000568586 MRPL35Q9NZE8 188 aaKnown RBP18.38■□□□□ 0.53
RAB40C-211ENST00000568586 TGIF2-C20orf24A0A0A6YYL0 155 aa18.37■□□□□ 0.53
RAB40C-211ENST00000568586 IGIPA6NJ69 53 aa18.37■□□□□ 0.53
RAB40C-211ENST00000568586 COMMD7Q86VX2 200 aa18.37■□□□□ 0.53
RAB40C-211ENST00000568586 UBE2D1P51668 147 aa18.36■□□□□ 0.53
RAB40C-211ENST00000568586 TEX43Q6ZNM6 134 aa18.36■□□□□ 0.53
RAB40C-211ENST00000568586 PRR3P79522 188 aaKnown RBP18.35■□□□□ 0.53
RAB40C-211ENST00000568586 GAGE2BQ13066 116 aa18.35■□□□□ 0.53
RAB40C-211ENST00000568586 LINC00173Q6ZV60 143 aa18.35■□□□□ 0.53
RAB40C-211ENST00000568586 LINC01561Q8N1V8 128 aa18.34■□□□□ 0.53
RAB40C-211ENST00000568586 GNB1LQ9BYB4 327 aa18.34■□□□□ 0.53
RAB40C-211ENST00000568586 G0S2P27469 103 aa18.33■□□□□ 0.52
RAB40C-211ENST00000568586 KIAA0087Q14695 138 aa18.33■□□□□ 0.52
RAB40C-211ENST00000568586 S100PP25815 95 aa18.32■□□□□ 0.52
RAB40C-211ENST00000568586 KIAA1644Q3SXP7 199 aa18.32■□□□□ 0.52
RAB40C-211ENST00000568586 Q6ZN92 141 aa18.32■□□□□ 0.52
RAB40C-211ENST00000568586 FAM19A3Q7Z5A8 133 aa18.32■□□□□ 0.52
RAB40C-211ENST00000568586 C2orf88Q9BSF0 95 aa18.32■□□□□ 0.52
RAB40C-211ENST00000568586 CARHSP1Q9Y2V2 147 aaKnown RBP18.32■□□□□ 0.52
RAB40C-211ENST00000568586 NDUFA1O15239 70 aa18.31■□□□□ 0.52
RAB40C-211ENST00000568586 VCX2Q9H322 139 aa18.31■□□□□ 0.52
RAB40C-211ENST00000568586 A0A0J9YXV3 536 aa18.3■□□□□ 0.52
RAB40C-211ENST00000568586 A0A1W2PNN7 141 aa18.3■□□□□ 0.52
RAB40C-211ENST00000568586 C10orf25Q5T742 122 aa18.3■□□□□ 0.52
RAB40C-211ENST00000568586 TLX1NBP0CAT3 122 aa18.29■□□□□ 0.52
RAB40C-211ENST00000568586 ZC2HC1BQ5TFG8 222 aa18.29■□□□□ 0.52
RAB40C-211ENST00000568586 COX19Q49B96 90 aa18.28■□□□□ 0.52
RAB40C-211ENST00000568586 TOMM6Q96B49 74 aa18.28■□□□□ 0.52
RAB40C-211ENST00000568586 TIMM17AQ99595 171 aa18.28■□□□□ 0.52
RAB40C-211ENST00000568586 LINC01546A6NGU7 62 aa18.27■□□□□ 0.52
RAB40C-211ENST00000568586 MT1HL1P0DM35 61 aa18.27■□□□□ 0.52
RAB40C-211ENST00000568586 RHEBQ15382 184 aa18.27■□□□□ 0.52
RAB40C-211ENST00000568586 UNQ6190/PRO20217Q6UXQ8 127 aa18.27■□□□□ 0.52
RAB40C-211ENST00000568586 ALKBH7Q9BT30 221 aaPredicted RBP18.27■□□□□ 0.52
RAB40C-211ENST00000568586 RPL18AQ02543 176 aaKnown RBP18.26■□□□□ 0.51
RAB40C-211ENST00000568586 PAPPA-AS1Q5QFB9 102 aa18.26■□□□□ 0.51
RAB40C-211ENST00000568586 C6orf48Q9UBA6 75 aa18.26■□□□□ 0.51
RAB40C-211ENST00000568586 C9orf116Q5BN46 136 aaPredicted RBP18.25■□□□□ 0.51
RAB40C-211ENST00000568586 SERTAD4-AS1Q5TG53 156 aa18.25■□□□□ 0.51
RAB40C-211ENST00000568586 HMCN2Q8NDA2 5059 aa18.24■□□□□ 0.51
RAB40C-211ENST00000568586 MT-ND6P03923 174 aa18.23■□□□□ 0.51
RAB40C-211ENST00000568586 Q6ZRP5 223 aa18.23■□□□□ 0.51
RAB40C-211ENST00000568586 ERASQ7Z444 233 aa18.22■□□□□ 0.51
RAB40C-211ENST00000568586 TRBV30A0A0K0K1B3 111 aa18.21■□□□□ 0.51
RAB40C-211ENST00000568586 TNXBP22105 4242 aa18.21■□□□□ 0.51
RAB40C-211ENST00000568586 LINC01549A6NIU2 74 aa18.2■□□□□ 0.5
RAB40C-211ENST00000568586 SEC11AP67812 179 aa18.2■□□□□ 0.5
RAB40C-211ENST00000568586 SRSF9Q13242 221 aaKnown RBP eCLIP18.2■□□□□ 0.5
RAB40C-211ENST00000568586 RPS10P5Q9NQ39 176 aa18.2■□□□□ 0.5
RAB40C-211ENST00000568586 HERVK_113P63121 156 aa18.18■□□□□ 0.5
RAB40C-211ENST00000568586 MRPL18Q9H0U6 180 aaKnown RBP18.18■□□□□ 0.5
RAB40C-211ENST00000568586 SPINK6Q6UWN8 80 aa18.17■□□□□ 0.5
RAB40C-211ENST00000568586 C2orf82Q6UX34 121 aa18.16■□□□□ 0.5
RAB40C-211ENST00000568586 SCGB3A1Q96QR1 104 aa18.16■□□□□ 0.5
RAB40C-211ENST00000568586 FABP9Q0Z7S8 132 aa18.15■□□□□ 0.5
RAB40C-211ENST00000568586 CDKN2A-AS1Q9UH64 79 aa18.15■□□□□ 0.5
RAB40C-211ENST00000568586 Q8IZM0 81 aa18.14■□□□□ 0.49
RAB40C-211ENST00000568586 LINC01600Q96MT4 127 aa18.13■□□□□ 0.49
RAB40C-211ENST00000568586 NDUFC2-KCTD14E9PQ53 114 aa18.12■□□□□ 0.49
RAB40C-211ENST00000568586 PHF5AQ7RTV0 110 aaKnown RBP18.12■□□□□ 0.49
RAB40C-211ENST00000568586 PACRGQ96M98 296 aaPredicted RBP18.12■□□□□ 0.49
RAB40C-211ENST00000568586 GEMIN7Q9H840 131 aaKnown RBP18.11■□□□□ 0.49
RAB40C-211ENST00000568586 PSORS1C2Q9UIG4 136 aa18.11■□□□□ 0.49
RAB40C-211ENST00000568586 PRSS2P07478 247 aa18.1■□□□□ 0.49
RAB40C-211ENST00000568586 FAM168BA1KXE4 195 aa18.09■□□□□ 0.49
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