RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 TRGC2P03986 189 aa11.91□□□□□ -0.5
GTF3C1-207ENST00000567806 ESDP10768 282 aa11.91□□□□□ -0.5
GTF3C1-207ENST00000567806 HIGD2BQ4VC39 106 aa11.91□□□□□ -0.5
GTF3C1-207ENST00000567806 RNASEKQ6P5S7 137 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-207ENST00000567806 FA2HQ7L5A8 372 aa11.91□□□□□ -0.5
GTF3C1-207ENST00000567806 TMEM101Q96IK0 257 aa11.91□□□□□ -0.5
GTF3C1-207ENST00000567806 MAJINQ3KP22 176 aa11.9□□□□□ -0.5
GTF3C1-207ENST00000567806 CHCHD10Q8WYQ3 142 aaPredicted RBP11.9□□□□□ -0.5
GTF3C1-207ENST00000567806 TIMM21Q9BVV7 248 aa11.89□□□□□ -0.51
GTF3C1-207ENST00000567806 CSDC2Q9Y534 153 aaKnown RBP11.89□□□□□ -0.51
GTF3C1-207ENST00000567806 IGKV2-24A0A0C4DH68 120 aa11.88□□□□□ -0.51
GTF3C1-207ENST00000567806 NPSP0C0P6 89 aa11.88□□□□□ -0.51
GTF3C1-207ENST00000567806 IFI27P40305 119 aaPredicted RBP11.88□□□□□ -0.51
GTF3C1-207ENST00000567806 MRPL52Q86TS9 123 aaKnown RBP11.88□□□□□ -0.51
GTF3C1-207ENST00000567806 C18orf32Q8TCD1 76 aa11.88□□□□□ -0.51
GTF3C1-207ENST00000567806 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-207ENST00000567806 IGKV2-29A2NJV5 120 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-207ENST00000567806 LINC01546A6NGU7 62 aa11.87□□□□□ -0.51
GTF3C1-207ENST00000567806 LINC00614P0C842 121 aa11.87□□□□□ -0.51
GTF3C1-207ENST00000567806 CHCHD1Q96BP2 118 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-207ENST00000567806 SPANXA1Q9NS26 97 aa11.87□□□□□ -0.51
GTF3C1-207ENST00000567806 CYSLTR1Q9Y271 337 aa11.87□□□□□ -0.51
GTF3C1-207ENST00000567806 FGF6P10767 208 aa11.86□□□□□ -0.51
GTF3C1-207ENST00000567806 PAPPA-AS1Q5QFB9 102 aa11.86□□□□□ -0.51
GTF3C1-207ENST00000567806 STPG4Q8N801 248 aa11.86□□□□□ -0.51
GTF3C1-207ENST00000567806 OR5A1Q8NGJ0 315 aa11.86□□□□□ -0.51
GTF3C1-207ENST00000567806 GVQW2A0A096LPI5 108 aaPredicted RBP11.85□□□□□ -0.51
GTF3C1-207ENST00000567806 BAGE3Q86Y29 109 aa11.85□□□□□ -0.51
GTF3C1-207ENST00000567806 PYGO1Q9Y3Y4 419 aa11.84□□□□□ -0.51
GTF3C1-207ENST00000567806 C1orf196B1AJZ1 125 aa11.83□□□□□ -0.52
GTF3C1-207ENST00000567806 CCL25O15444 150 aa11.83□□□□□ -0.52
GTF3C1-207ENST00000567806 FOXI1Q12951 378 aa11.83□□□□□ -0.52
GTF3C1-207ENST00000567806 XCL1P47992 114 aa11.82□□□□□ -0.52
GTF3C1-207ENST00000567806 C2orf66Q6UXQ4 117 aa11.82□□□□□ -0.52
GTF3C1-207ENST00000567806 LINC00474Q9P2X8 69 aa11.82□□□□□ -0.52
GTF3C1-207ENST00000567806 PKIGQ9Y2B9 76 aa11.82□□□□□ -0.52
GTF3C1-207ENST00000567806 MRPS36P82909 103 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-207ENST00000567806 Q6ZN92 141 aa11.81□□□□□ -0.52
GTF3C1-207ENST00000567806 UBE2D4Q9Y2X8 147 aa11.81□□□□□ -0.52
GTF3C1-207ENST00000567806 A0A096LNI7 61 aa11.8□□□□□ -0.52
GTF3C1-207ENST00000567806 IGHV1-58A0A0C4DH39 117 aa11.8□□□□□ -0.52
GTF3C1-207ENST00000567806 LINC00959A0A1B0GUT2 108 aa11.8□□□□□ -0.52
GTF3C1-207ENST00000567806 HSBP1O75506 76 aa11.8□□□□□ -0.52
GTF3C1-207ENST00000567806 PRR3P79522 188 aaKnown RBP11.8□□□□□ -0.52
GTF3C1-207ENST00000567806 TMEM141Q96I45 108 aa11.8□□□□□ -0.52
GTF3C1-207ENST00000567806 LINC01600Q96MT4 127 aa11.8□□□□□ -0.52
GTF3C1-207ENST00000567806 HBDP02042 147 aa11.79□□□□□ -0.52
GTF3C1-207ENST00000567806 SS18Q15532 418 aa11.79□□□□□ -0.52
GTF3C1-207ENST00000567806 ZNF664Q8N3J9 261 aa11.79□□□□□ -0.52
GTF3C1-207ENST00000567806 TOMM6Q96B49 74 aa11.79□□□□□ -0.52
GTF3C1-207ENST00000567806 TIMM17AQ99595 171 aa11.79□□□□□ -0.52
GTF3C1-207ENST00000567806 ERASQ7Z444 233 aa11.78□□□□□ -0.52
GTF3C1-207ENST00000567806 CDC42SE2Q9NRR3 84 aa11.78□□□□□ -0.52
GTF3C1-207ENST00000567806 LINC00526Q96FQ7 95 aa11.77□□□□□ -0.53
GTF3C1-207ENST00000567806 CARD19Q96LW7 228 aa11.77□□□□□ -0.53
GTF3C1-207ENST00000567806 C2orf88Q9BSF0 95 aa11.77□□□□□ -0.53
GTF3C1-207ENST00000567806 ZNF561-AS1K7EIQ3 104 aa11.76□□□□□ -0.53
GTF3C1-207ENST00000567806 HIST1H2BKO60814 126 aa11.76□□□□□ -0.53
GTF3C1-207ENST00000567806 ATP5LO75964 103 aa11.76□□□□□ -0.53
GTF3C1-207ENST00000567806 HIST1H2BJP06899 126 aa11.76□□□□□ -0.53
GTF3C1-207ENST00000567806 HIST1H2BOP23527 126 aa11.76□□□□□ -0.53
GTF3C1-207ENST00000567806 HIST1H2BBP33778 126 aa11.76□□□□□ -0.53
GTF3C1-207ENST00000567806 HIST1H2BDP58876 126 aa11.76□□□□□ -0.53
GTF3C1-207ENST00000567806 HIST1H2BCP62807 126 aa11.76□□□□□ -0.53
GTF3C1-207ENST00000567806 HIST2H2BEQ16778 126 aa11.76□□□□□ -0.53
GTF3C1-207ENST00000567806 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.76□□□□□ -0.53
GTF3C1-207ENST00000567806 HIST1H2BHQ93079 126 aa11.76□□□□□ -0.53
GTF3C1-207ENST00000567806 SCGB3A1Q96QR1 104 aa11.76□□□□□ -0.53
GTF3C1-207ENST00000567806 HIST1H2BNQ99877 126 aa11.76□□□□□ -0.53
GTF3C1-207ENST00000567806 HIST1H2BMQ99879 126 aa11.76□□□□□ -0.53
GTF3C1-207ENST00000567806 RPL39P62891 51 aaKnown RBP11.75□□□□□ -0.53
GTF3C1-207ENST00000567806 SPINK6Q6UWN8 80 aa11.75□□□□□ -0.53
GTF3C1-207ENST00000567806 TEX43Q6ZNM6 134 aa11.75□□□□□ -0.53
GTF3C1-207ENST00000567806 VCX2Q9H322 139 aa11.75□□□□□ -0.53
GTF3C1-207ENST00000567806 TNXBP22105 4242 aa11.74□□□□□ -0.53
GTF3C1-207ENST00000567806 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-207ENST00000567806 SYCNQ0VAF6 134 aa11.74□□□□□ -0.53
GTF3C1-207ENST00000567806 REG3GQ6UW15 175 aa11.74□□□□□ -0.53
GTF3C1-207ENST00000567806 CD164L2Q6UWJ8 174 aa11.74□□□□□ -0.53
GTF3C1-207ENST00000567806 IGIPA6NJ69 53 aa11.73□□□□□ -0.53
GTF3C1-207ENST00000567806 SEC11AP67812 179 aa11.73□□□□□ -0.53
GTF3C1-207ENST00000567806 A0A0J9YXV3 536 aa11.72□□□□□ -0.53
GTF3C1-207ENST00000567806 Q6ZRP5 223 aa11.72□□□□□ -0.53
GTF3C1-207ENST00000567806 URB1-AS1Q96HZ7 61 aa11.72□□□□□ -0.53
GTF3C1-207ENST00000567806 SERF1AO75920 110 aa11.71□□□□□ -0.53
GTF3C1-207ENST00000567806 MALP21145 153 aa11.71□□□□□ -0.53
GTF3C1-207ENST00000567806 COA6Q5JTJ3 125 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-207ENST00000567806 PACRGQ96M98 296 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-207ENST00000567806 IGLV4-3A0A075B6K6 122 aa11.7□□□□□ -0.54
GTF3C1-207ENST00000567806 HSPB8Q9UJY1 196 aa11.7□□□□□ -0.54
GTF3C1-207ENST00000567806 LOC107984640A0A0U1RRK4 108 aa11.69□□□□□ -0.54
GTF3C1-207ENST00000567806 IFITM10A6NMD0 228 aa11.69□□□□□ -0.54
GTF3C1-207ENST00000567806 S100A6P06703 90 aa11.69□□□□□ -0.54
GTF3C1-207ENST00000567806 KRTAP10-8P60410 259 aa11.69□□□□□ -0.54
GTF3C1-207ENST00000567806 GAGE2BQ13066 116 aa11.69□□□□□ -0.54
GTF3C1-207ENST00000567806 Q6ZUT4 128 aa11.69□□□□□ -0.54
GTF3C1-207ENST00000567806 IGLV4-69A0A075B6H9 119 aa11.68□□□□□ -0.54
GTF3C1-207ENST00000567806 COX7A2LO14548 114 aa11.68□□□□□ -0.54
GTF3C1-207ENST00000567806 LEPROTL1O95214 131 aa11.68□□□□□ -0.54
GTF3C1-207ENST00000567806 PTTG1IPP53801 180 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms