RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 LYPD6BQ8NI32 183 aa5.75□□□□□ -1.49
CDH13-210ENST00000567445 MRAP2Q96G30 205 aa5.75□□□□□ -1.49
CDH13-210ENST00000567445 GEMIN7Q9H840 131 aaKnown RBP5.75□□□□□ -1.49
CDH13-210ENST00000567445 TMEM242Q9NWH2 141 aa5.75□□□□□ -1.49
CDH13-210ENST00000567445 TRBV27A0A0K0K1C4 114 aa5.74□□□□□ -1.49
CDH13-210ENST00000567445 A0A1B0GUT8 65 aa5.74□□□□□ -1.49
CDH13-210ENST00000567445 CEBPGP53567 150 aa5.74□□□□□ -1.49
CDH13-210ENST00000567445 SS18Q15532 418 aa5.74□□□□□ -1.49
CDH13-210ENST00000567445 TSKUQ8WUA8 353 aa5.74□□□□□ -1.49
CDH13-210ENST00000567445 LINC00526Q96FQ7 95 aa5.74□□□□□ -1.49
CDH13-210ENST00000567445 CARD19Q96LW7 228 aa5.74□□□□□ -1.49
CDH13-210ENST00000567445 LINC01600Q96MT4 127 aa5.74□□□□□ -1.49
CDH13-210ENST00000567445 TMEM191AQ9H0A3 160 aa5.74□□□□□ -1.49
CDH13-210ENST00000567445 CDC42SE2Q9NRR3 84 aa5.74□□□□□ -1.49
CDH13-210ENST00000567445 HIGD1CA8MV81 97 aa5.73□□□□□ -1.49
CDH13-210ENST00000567445 HSBP1L1C9JCN9 74 aa5.73□□□□□ -1.49
CDH13-210ENST00000567445 POLR2KP53803 58 aaKnown RBP5.73□□□□□ -1.49
CDH13-210ENST00000567445 C6orf226Q5I0X4 101 aa5.73□□□□□ -1.49
CDH13-210ENST00000567445 ZNF664Q8N3J9 261 aa5.73□□□□□ -1.49
CDH13-210ENST00000567445 SMIM7Q9BQ49 75 aa5.73□□□□□ -1.49
CDH13-210ENST00000567445 C7orf77A4D0Y5 90 aa5.72□□□□□ -1.49
CDH13-210ENST00000567445 RAB4AP20338 218 aa5.72□□□□□ -1.49
CDH13-210ENST00000567445 SYCNQ0VAF6 134 aa5.72□□□□□ -1.49
CDH13-210ENST00000567445 LINC01551Q86U37 167 aa5.72□□□□□ -1.49
CDH13-210ENST00000567445 EIF5A2Q9GZV4 153 aaKnown RBP5.72□□□□□ -1.49
CDH13-210ENST00000567445 C1orf196B1AJZ1 125 aa5.71□□□□□ -1.49
CDH13-210ENST00000567445 SPINK6Q6UWN8 80 aa5.71□□□□□ -1.49
CDH13-210ENST00000567445 AKAP14Q86UN6 197 aa5.71□□□□□ -1.49
CDH13-210ENST00000567445 AMN1Q8IY45 258 aa5.71□□□□□ -1.49
CDH13-210ENST00000567445 ISOC2Q96AB3 205 aa5.71□□□□□ -1.49
CDH13-210ENST00000567445 OSTCQ9NRP0 149 aa5.71□□□□□ -1.49
CDH13-210ENST00000567445 A0A0J9YXV3 536 aa5.71□□□□□ -1.5
CDH13-210ENST00000567445 ZNF727A8MUV8 499 aa5.71□□□□□ -1.5
CDH13-210ENST00000567445 PPP1R17O96001 155 aa5.71□□□□□ -1.5
CDH13-210ENST00000567445 FCER1GP30273 86 aa5.71□□□□□ -1.5
CDH13-210ENST00000567445 REG3GQ6UW15 175 aa5.71□□□□□ -1.5
CDH13-210ENST00000567445 CSDC2Q9Y534 153 aaKnown RBP5.71□□□□□ -1.5
CDH13-210ENST00000567445 IGLV4-69A0A075B6H9 119 aa5.7□□□□□ -1.5
CDH13-210ENST00000567445 LOC107984640A0A0U1RRK4 108 aa5.7□□□□□ -1.5
CDH13-210ENST00000567445 SMKR1H3BMG3 65 aa5.7□□□□□ -1.5
CDH13-210ENST00000567445 COX7A2LO14548 114 aa5.7□□□□□ -1.5
CDH13-210ENST00000567445 SMAGPQ0VAQ4 97 aa5.7□□□□□ -1.5
CDH13-210ENST00000567445 RIGQ13278 110 aa5.7□□□□□ -1.5
CDH13-210ENST00000567445 Q6ZRP5 223 aa5.7□□□□□ -1.5
CDH13-210ENST00000567445 NRACQ8N912 160 aa5.7□□□□□ -1.5
CDH13-210ENST00000567445 NUP35Q8NFH5 326 aa5.7□□□□□ -1.5
CDH13-210ENST00000567445 URB1-AS1Q96HZ7 61 aa5.7□□□□□ -1.5
CDH13-210ENST00000567445 KIR2DL4Q99706 377 aa5.7□□□□□ -1.5
CDH13-210ENST00000567445 RNF213Q63HN8 5207 aa5.69□□□□□ -1.5
CDH13-210ENST00000567445 SRP19P09132 144 aaKnown RBP5.69□□□□□ -1.5
CDH13-210ENST00000567445 SRSF9Q13242 221 aaKnown RBP eCLIP5.69□□□□□ -1.5
CDH13-210ENST00000567445 UBE2D4Q9Y2X8 147 aa5.69□□□□□ -1.5
CDH13-210ENST00000567445 V9GYV3 84 aa5.69□□□□□ -1.5
CDH13-210ENST00000567445 TRAV13-1A0A0B4J241 112 aa5.68□□□□□ -1.5
CDH13-210ENST00000567445 PPP1R2P9O14990 202 aa5.68□□□□□ -1.5
CDH13-210ENST00000567445 KRTAP10-8P60410 259 aa5.68□□□□□ -1.5
CDH13-210ENST00000567445 RNASE13Q5GAN3 156 aaKnown RBP5.68□□□□□ -1.5
CDH13-210ENST00000567445 CAMK2N2Q96S95 79 aa5.68□□□□□ -1.5
CDH13-210ENST00000567445 NAT8BQ9UHF3 227 aa5.68□□□□□ -1.5
CDH13-210ENST00000567445 LRP2P98164 4655 aa5.68□□□□□ -1.5
CDH13-210ENST00000567445 APOMO95445 188 aa5.67□□□□□ -1.5
CDH13-210ENST00000567445 TMEM241Q24JQ0 296 aa5.67□□□□□ -1.5
CDH13-210ENST00000567445 C2orf48Q96LS8 159 aa5.67□□□□□ -1.5
CDH13-210ENST00000567445 TIMM21Q9BVV7 248 aa5.67□□□□□ -1.5
CDH13-210ENST00000567445 MRPL51Q4U2R6 128 aaKnown RBP5.66□□□□□ -1.5
CDH13-210ENST00000567445 FAM74A3Q4VXF1 159 aa5.66□□□□□ -1.5
CDH13-210ENST00000567445 FAM104BQ5XKR9 115 aa5.66□□□□□ -1.5
CDH13-210ENST00000567445 Q6ZUT4 128 aa5.66□□□□□ -1.5
CDH13-210ENST00000567445 C5orf38Q86SI9 138 aa5.66□□□□□ -1.5
CDH13-210ENST00000567445 LINC00518Q8N0U6 118 aa5.66□□□□□ -1.5
CDH13-210ENST00000567445 C20orf78Q9BR46 151 aa5.66□□□□□ -1.5
CDH13-210ENST00000567445 A0A1W2PNN7 141 aa5.65□□□□□ -1.5
CDH13-210ENST00000567445 LINC00862A6NCI5 91 aa5.65□□□□□ -1.5
CDH13-210ENST00000567445 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.65□□□□□ -1.5
CDH13-210ENST00000567445 TCAPO15273 167 aa5.65□□□□□ -1.5
CDH13-210ENST00000567445 RPL23P62829 140 aaKnown RBP5.65□□□□□ -1.5
CDH13-210ENST00000567445 RPL18AQ02543 176 aaKnown RBP5.65□□□□□ -1.5
CDH13-210ENST00000567445 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.5
CDH13-210ENST00000567445 MPLKIPQ8TAP9 179 aa5.65□□□□□ -1.5
CDH13-210ENST00000567445 TRBV24-1A0A075B6N3 115 aa5.64□□□□□ -1.51
CDH13-210ENST00000567445 A0A1B0GW15 77 aa5.64□□□□□ -1.51
CDH13-210ENST00000567445 SMIM27A0A1W2PRY6 76 aa5.64□□□□□ -1.51
CDH13-210ENST00000567445 MT-ND6P03923 174 aa5.64□□□□□ -1.51
CDH13-210ENST00000567445 CKS2P33552 79 aa5.64□□□□□ -1.51
CDH13-210ENST00000567445 RPL32P62910 135 aaKnown RBP5.64□□□□□ -1.51
CDH13-210ENST00000567445 SPAG11BQ08648 103 aa5.64□□□□□ -1.51
CDH13-210ENST00000567445 ADIRFQ15847 76 aa5.64□□□□□ -1.51
CDH13-210ENST00000567445 C9orf116Q5BN46 136 aaPredicted RBP5.64□□□□□ -1.51
CDH13-210ENST00000567445 OR10D4PQ8NGN7 298 aa5.64□□□□□ -1.51
CDH13-210ENST00000567445 NAT8Q9UHE5 227 aa5.64□□□□□ -1.51
CDH13-210ENST00000567445 RPL39P62891 51 aaKnown RBP5.64□□□□□ -1.51
CDH13-210ENST00000567445 OPRPNQ99935 248 aaPredicted RBP5.64□□□□□ -1.51
CDH13-210ENST00000567445 SPANXA1Q9NS26 97 aa5.64□□□□□ -1.51
CDH13-210ENST00000567445 PSORS1C2Q9UIG4 136 aa5.64□□□□□ -1.51
CDH13-210ENST00000567445 RPL24P83731 157 aaKnown RBP5.63□□□□□ -1.51
CDH13-210ENST00000567445 ORAOV1Q8WV07 137 aa5.63□□□□□ -1.51
CDH13-210ENST00000567445 FAM104AQ969W3 186 aa5.63□□□□□ -1.51
CDH13-210ENST00000567445 SMIM2Q9BVW6 85 aa5.63□□□□□ -1.51
CDH13-210ENST00000567445 MRPL35Q9NZE8 188 aaKnown RBP5.63□□□□□ -1.51
CDH13-210ENST00000567445 IGHV3OR16-9A0A0B4J2B5 98 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms