RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.2□□□□□ -1.42
CAPN3-216ENST00000567071 IGHV1-24A0A0C4DH33 117 aa6.2□□□□□ -1.42
CAPN3-216ENST00000567071 IGKV2-29A2NJV5 120 aaPredicted RBP6.2□□□□□ -1.42
CAPN3-216ENST00000567071 LINC01546A6NGU7 62 aa6.2□□□□□ -1.42
CAPN3-216ENST00000567071 TIRAPP58753 221 aa6.2□□□□□ -1.42
CAPN3-216ENST00000567071 SNRPEP62304 92 aaKnown RBP6.2□□□□□ -1.42
CAPN3-216ENST00000567071 RPL39P62891 51 aaKnown RBP6.2□□□□□ -1.42
CAPN3-216ENST00000567071 ORMDL2Q53FV1 153 aa6.2□□□□□ -1.42
CAPN3-216ENST00000567071 CHCHD7Q9BUK0 85 aa6.2□□□□□ -1.42
CAPN3-216ENST00000567071 A0A096LNJ9 63 aa6.19□□□□□ -1.42
CAPN3-216ENST00000567071 TRBV6-8A0A0A6YYG3 113 aa6.19□□□□□ -1.42
CAPN3-216ENST00000567071 K7EMI3 77 aa6.19□□□□□ -1.42
CAPN3-216ENST00000567071 HBDP02042 147 aa6.19□□□□□ -1.42
CAPN3-216ENST00000567071 GAGE6Q13070 117 aa6.19□□□□□ -1.42
CAPN3-216ENST00000567071 TMEM97Q5BJF2 176 aa6.19□□□□□ -1.42
CAPN3-216ENST00000567071 CHCHD5Q9BSY4 110 aa6.19□□□□□ -1.42
CAPN3-216ENST00000567071 TMEM243Q9BU79 118 aa6.19□□□□□ -1.42
CAPN3-216ENST00000567071 UBE2L6O14933 153 aa6.18□□□□□ -1.42
CAPN3-216ENST00000567071 ESDP10768 282 aa6.18□□□□□ -1.42
CAPN3-216ENST00000567071 C2orf66Q6UXQ4 117 aa6.18□□□□□ -1.42
CAPN3-216ENST00000567071 HIST3H2BBQ8N257 126 aa6.18□□□□□ -1.42
CAPN3-216ENST00000567071 C20orf203Q8NBC4 194 aa6.18□□□□□ -1.42
CAPN3-216ENST00000567071 C7orf33Q8WU49 177 aa6.18□□□□□ -1.42
CAPN3-216ENST00000567071 CYSLTR1Q9Y271 337 aa6.18□□□□□ -1.42
CAPN3-216ENST00000567071 C5orf52A6NGY3 159 aa6.17□□□□□ -1.42
CAPN3-216ENST00000567071 FABP4P15090 132 aa6.17□□□□□ -1.42
CAPN3-216ENST00000567071 S100A2P29034 98 aa6.17□□□□□ -1.42
CAPN3-216ENST00000567071 LINC00173Q6ZV60 143 aa6.17□□□□□ -1.42
CAPN3-216ENST00000567071 TMEM262E9PQX1 116 aa6.16□□□□□ -1.42
CAPN3-216ENST00000567071 AMMECR1LQ6DCA0 310 aa6.16□□□□□ -1.42
CAPN3-216ENST00000567071 TMEM18Q96B42 140 aa6.16□□□□□ -1.42
CAPN3-216ENST00000567071 TOMM6Q96B49 74 aa6.16□□□□□ -1.42
CAPN3-216ENST00000567071 DPH3Q96FX2 82 aa6.16□□□□□ -1.42
CAPN3-216ENST00000567071 KRTAP4-12Q9BQ66 201 aa6.16□□□□□ -1.42
CAPN3-216ENST00000567071 IGKV2D-24A0A075B6R9 120 aa6.15□□□□□ -1.42
CAPN3-216ENST00000567071 IFITM10A6NMD0 228 aa6.15□□□□□ -1.42
CAPN3-216ENST00000567071 KRTAP9-7A8MTY7 169 aa6.15□□□□□ -1.42
CAPN3-216ENST00000567071 LEPROTL1O95214 131 aa6.15□□□□□ -1.42
CAPN3-216ENST00000567071 FGF6P10767 208 aa6.15□□□□□ -1.42
CAPN3-216ENST00000567071 G0S2P27469 103 aa6.15□□□□□ -1.42
CAPN3-216ENST00000567071 MPV17L2Q567V2 206 aa6.15□□□□□ -1.42
CAPN3-216ENST00000567071 RNASE13Q5GAN3 156 aaKnown RBP6.15□□□□□ -1.42
CAPN3-216ENST00000567071 SCGB3A1Q96QR1 104 aa6.15□□□□□ -1.42
CAPN3-216ENST00000567071 OPRPNQ99935 248 aaPredicted RBP6.15□□□□□ -1.42
CAPN3-216ENST00000567071 UBE2D4Q9Y2X8 147 aa6.15□□□□□ -1.42
CAPN3-216ENST00000567071 DGAT2L7PQ6IED9 249 aa6.14□□□□□ -1.43
CAPN3-216ENST00000567071 Q6ZUT4 128 aa6.14□□□□□ -1.43
CAPN3-216ENST00000567071 HIST1H2BLQ99880 126 aa6.14□□□□□ -1.43
CAPN3-216ENST00000567071 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.14□□□□□ -1.43
CAPN3-216ENST00000567071 A0A087WX48 190 aa6.13□□□□□ -1.43
CAPN3-216ENST00000567071 IGIPA6NJ69 53 aa6.13□□□□□ -1.43
CAPN3-216ENST00000567071 H0Y8G0 127 aa6.13□□□□□ -1.43
CAPN3-216ENST00000567071 H7C423 109 aa6.13□□□□□ -1.43
CAPN3-216ENST00000567071 RBX1P62877 108 aa6.13□□□□□ -1.43
CAPN3-216ENST00000567071 PRR4Q16378 134 aa6.13□□□□□ -1.43
CAPN3-216ENST00000567071 ZC2HC1BQ5TFG8 222 aa6.13□□□□□ -1.43
CAPN3-216ENST00000567071 CLPSL2Q6UWE3 100 aa6.13□□□□□ -1.43
CAPN3-216ENST00000567071 OR5A1Q8NGJ0 315 aa6.13□□□□□ -1.43
CAPN3-216ENST00000567071 IFI27L1Q96BM0 104 aa6.13□□□□□ -1.43
CAPN3-216ENST00000567071 TMEM101Q96IK0 257 aa6.13□□□□□ -1.43
CAPN3-216ENST00000567071 SPANXA1Q9NS26 97 aa6.13□□□□□ -1.43
CAPN3-216ENST00000567071 HSPB8Q9UJY1 196 aa6.13□□□□□ -1.43
CAPN3-216ENST00000567071 IGLV4-60A0A075B6I1 120 aa6.12□□□□□ -1.43
CAPN3-216ENST00000567071 IGLV4-3A0A075B6K6 122 aa6.12□□□□□ -1.43
CAPN3-216ENST00000567071 IGKV3OR2-268A0A0C4DH90 116 aa6.12□□□□□ -1.43
CAPN3-216ENST00000567071 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-216ENST00000567071 ATP5LO75964 103 aa6.12□□□□□ -1.43
CAPN3-216ENST00000567071 ZNF25P17030 456 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-216ENST00000567071 KRTDAPP60985 99 aa6.12□□□□□ -1.43
CAPN3-216ENST00000567071 SMAGPQ0VAQ4 97 aa6.12□□□□□ -1.43
CAPN3-216ENST00000567071 SPINK6Q6UWN8 80 aa6.12□□□□□ -1.43
CAPN3-216ENST00000567071 ERASQ7Z444 233 aa6.12□□□□□ -1.43
CAPN3-216ENST00000567071 MRPL52Q86TS9 123 aaKnown RBP6.12□□□□□ -1.43
CAPN3-216ENST00000567071 PACRGQ96M98 296 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-216ENST00000567071 TIMM17AQ99595 171 aa6.12□□□□□ -1.43
CAPN3-216ENST00000567071 TIMM21Q9BVV7 248 aa6.12□□□□□ -1.43
CAPN3-216ENST00000567071 LINC01549A6NIU2 74 aa6.11□□□□□ -1.43
CAPN3-216ENST00000567071 ANGP03950 147 aaKnown RBP6.11□□□□□ -1.43
CAPN3-216ENST00000567071 PKIAP61925 76 aa6.11□□□□□ -1.43
CAPN3-216ENST00000567071 Q6ZN92 141 aa6.11□□□□□ -1.43
CAPN3-216ENST00000567071 ZNF664Q8N3J9 261 aa6.11□□□□□ -1.43
CAPN3-216ENST00000567071 FAM104AQ969W3 186 aa6.11□□□□□ -1.43
CAPN3-216ENST00000567071 TMEM141Q96I45 108 aa6.11□□□□□ -1.43
CAPN3-216ENST00000567071 PYGO1Q9Y3Y4 419 aa6.11□□□□□ -1.43
CAPN3-216ENST00000567071 A0A1B0GUV1 79 aa6.1□□□□□ -1.43
CAPN3-216ENST00000567071 PRSS1P07477 247 aa6.1□□□□□ -1.43
CAPN3-216ENST00000567071 C3orf79P0CE67 100 aa6.1□□□□□ -1.43
CAPN3-216ENST00000567071 MRPS36P82909 103 aaKnown RBP6.1□□□□□ -1.43
CAPN3-216ENST00000567071 TEX43Q6ZNM6 134 aa6.1□□□□□ -1.43
CAPN3-216ENST00000567071 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
CAPN3-216ENST00000567071 C9orf163Q8N9P6 203 aa6.1□□□□□ -1.43
CAPN3-216ENST00000567071 OR10D4PQ8NGN7 298 aa6.1□□□□□ -1.43
CAPN3-216ENST00000567071 MAP1LC3CQ9BXW4 147 aa6.1□□□□□ -1.43
CAPN3-216ENST00000567071 CDC42SE2Q9NRR3 84 aa6.1□□□□□ -1.43
CAPN3-216ENST00000567071 KLK12Q9UKR0 248 aa6.1□□□□□ -1.43
CAPN3-216ENST00000567071 TMEM238LA0A1B0GVL6 79 aa6.09□□□□□ -1.43
CAPN3-216ENST00000567071 PRR3P79522 188 aaKnown RBP6.09□□□□□ -1.43
CAPN3-216ENST00000567071 PMVKQ15126 192 aa6.09□□□□□ -1.43
CAPN3-216ENST00000567071 PAPPA-AS1Q5QFB9 102 aa6.09□□□□□ -1.43
CAPN3-216ENST00000567071 LINC00269Q8N2A0 174 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms