RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 SYCNQ0VAF6 134 aa8.92□□□□□ -0.98
COMMD4-216ENST00000567023 RPS10P5Q9NQ39 176 aa8.92□□□□□ -0.98
COMMD4-216ENST00000567023 PLA2G2DQ9UNK4 145 aa8.92□□□□□ -0.98
COMMD4-216ENST00000567023 APOC3P02656 99 aa8.91□□□□□ -0.98
COMMD4-216ENST00000567023 PRR3P79522 188 aaKnown RBP8.91□□□□□ -0.98
COMMD4-216ENST00000567023 TMEM18Q96B42 140 aa8.91□□□□□ -0.98
COMMD4-216ENST00000567023 GNB1LQ9BYB4 327 aa8.91□□□□□ -0.98
COMMD4-216ENST00000567023 COX7A2LO14548 114 aa8.9□□□□□ -0.98
COMMD4-216ENST00000567023 NDUFA5Q16718 116 aa8.9□□□□□ -0.98
COMMD4-216ENST00000567023 SVBPQ8N300 66 aa8.9□□□□□ -0.98
COMMD4-216ENST00000567023 MAP1LC3AQ9H492 121 aa8.9□□□□□ -0.98
COMMD4-216ENST00000567023 IGLV4-69A0A075B6H9 119 aa8.89□□□□□ -0.99
COMMD4-216ENST00000567023 SNAPINO95295 136 aa8.89□□□□□ -0.99
COMMD4-216ENST00000567023 MALP21145 153 aa8.89□□□□□ -0.99
COMMD4-216ENST00000567023 RPL39P62891 51 aaKnown RBP8.89□□□□□ -0.99
COMMD4-216ENST00000567023 Q6ZUT4 128 aa8.89□□□□□ -0.99
COMMD4-216ENST00000567023 Q8N8P6 123 aa8.89□□□□□ -0.99
COMMD4-216ENST00000567023 FAM104AQ969W3 186 aa8.89□□□□□ -0.99
COMMD4-216ENST00000567023 TRAV13-1A0A0B4J241 112 aa8.88□□□□□ -0.99
COMMD4-216ENST00000567023 RAB5AP20339 215 aa8.88□□□□□ -0.99
COMMD4-216ENST00000567023 PTTG1IPP53801 180 aa8.88□□□□□ -0.99
COMMD4-216ENST00000567023 COX19Q49B96 90 aa8.88□□□□□ -0.99
COMMD4-216ENST00000567023 RNASE13Q5GAN3 156 aaKnown RBP8.88□□□□□ -0.99
COMMD4-216ENST00000567023 C2orf48Q96LS8 159 aa8.88□□□□□ -0.99
COMMD4-216ENST00000567023 SPANXA1Q9NS26 97 aa8.88□□□□□ -0.99
COMMD4-216ENST00000567023 LOC107984640A0A0U1RRK4 108 aa8.87□□□□□ -0.99
COMMD4-216ENST00000567023 LOC389332A0A1B0GUA5 103 aa8.87□□□□□ -0.99
COMMD4-216ENST00000567023 K7EMI3 77 aa8.87□□□□□ -0.99
COMMD4-216ENST00000567023 MT-ND6P03923 174 aa8.87□□□□□ -0.99
COMMD4-216ENST00000567023 LINC01600Q96MT4 127 aa8.87□□□□□ -0.99
COMMD4-216ENST00000567023 APOMO95445 188 aa8.86□□□□□ -0.99
COMMD4-216ENST00000567023 MRPS36P82909 103 aaKnown RBP8.86□□□□□ -0.99
COMMD4-216ENST00000567023 KIAA1644Q3SXP7 199 aa8.86□□□□□ -0.99
COMMD4-216ENST00000567023 C5orf38Q86SI9 138 aa8.86□□□□□ -0.99
COMMD4-216ENST00000567023 CAMK2N2Q96S95 79 aa8.86□□□□□ -0.99
COMMD4-216ENST00000567023 NXT2Q9NPJ8 142 aaKnown RBP8.86□□□□□ -0.99
COMMD4-216ENST00000567023 PYGO1Q9Y3Y4 419 aa8.86□□□□□ -0.99
COMMD4-216ENST00000567023 IGHV3OR16-9A0A0B4J2B5 98 aa8.85□□□□□ -0.99
COMMD4-216ENST00000567023 SRSF9Q13242 221 aaKnown RBP eCLIP8.85□□□□□ -0.99
COMMD4-216ENST00000567023 SPINK6Q6UWN8 80 aa8.85□□□□□ -0.99
COMMD4-216ENST00000567023 Q6ZRP5 223 aa8.85□□□□□ -0.99
COMMD4-216ENST00000567023 ALKBH7Q9BT30 221 aaPredicted RBP8.85□□□□□ -0.99
COMMD4-216ENST00000567023 TGIF2-C20orf24A0A0A6YYL0 155 aa8.84□□□□□ -0.99
COMMD4-216ENST00000567023 GAGE2BQ13066 116 aa8.84□□□□□ -0.99
COMMD4-216ENST00000567023 RNF151Q2KHN1 245 aa8.84□□□□□ -0.99
COMMD4-216ENST00000567023 ORMDL2Q53FV1 153 aa8.84□□□□□ -0.99
COMMD4-216ENST00000567023 OR10D4PQ8NGN7 298 aa8.84□□□□□ -0.99
COMMD4-216ENST00000567023 YPEL4Q96NS1 127 aa8.84□□□□□ -0.99
COMMD4-216ENST00000567023 A0A1W2PNN7 141 aa8.83□□□□□ -1
COMMD4-216ENST00000567023 F8WDY8 70 aa8.83□□□□□ -1
COMMD4-216ENST00000567023 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.83□□□□□ -1
COMMD4-216ENST00000567023 IFI27P40305 119 aaPredicted RBP8.83□□□□□ -1
COMMD4-216ENST00000567023 OPRPNQ99935 248 aaPredicted RBP8.83□□□□□ -1
COMMD4-216ENST00000567023 MRPL18Q9H0U6 180 aaKnown RBP8.83□□□□□ -1
COMMD4-216ENST00000567023 LINC01546A6NGU7 62 aa8.82□□□□□ -1
COMMD4-216ENST00000567023 SPAG11BQ08648 103 aa8.82□□□□□ -1
COMMD4-216ENST00000567023 FABP9Q0Z7S8 132 aa8.82□□□□□ -1
COMMD4-216ENST00000567023 C2orf66Q6UXQ4 117 aa8.82□□□□□ -1
COMMD4-216ENST00000567023 SLC7A5P1Q8MH63 180 aa8.82□□□□□ -1
COMMD4-216ENST00000567023 MRPL35Q9NZE8 188 aaKnown RBP8.82□□□□□ -1
COMMD4-216ENST00000567023 CYSLTR1Q9Y271 337 aa8.82□□□□□ -1
COMMD4-216ENST00000567023 IGLV4-3A0A075B6K6 122 aa8.81□□□□□ -1
COMMD4-216ENST00000567023 A0A0J9YXV3 536 aa8.81□□□□□ -1
COMMD4-216ENST00000567023 NPSP0C0P6 89 aa8.81□□□□□ -1
COMMD4-216ENST00000567023 KRTAP10-8P60410 259 aa8.8□□□□□ -1
COMMD4-216ENST00000567023 C9orf116Q5BN46 136 aaPredicted RBP8.8□□□□□ -1
COMMD4-216ENST00000567023 REG3GQ6UW15 175 aa8.8□□□□□ -1
COMMD4-216ENST00000567023 IGIPA6NJ69 53 aa8.79□□□□□ -1
COMMD4-216ENST00000567023 IFITM10A6NMD0 228 aa8.79□□□□□ -1
COMMD4-216ENST00000567023 LRP2P98164 4655 aa8.79□□□□□ -1
COMMD4-216ENST00000567023 ORAOV1Q8WV07 137 aa8.79□□□□□ -1
COMMD4-216ENST00000567023 TMEM141Q96I45 108 aa8.79□□□□□ -1
COMMD4-216ENST00000567023 TRAPPC1Q9Y5R8 145 aa8.79□□□□□ -1
COMMD4-216ENST00000567023 TLX1NBP0CAT3 122 aa8.78□□□□□ -1
COMMD4-216ENST00000567023 G0S2P27469 103 aa8.78□□□□□ -1
COMMD4-216ENST00000567023 RPL18AQ02543 176 aaKnown RBP8.78□□□□□ -1
COMMD4-216ENST00000567023 TOMM6Q96B49 74 aa8.78□□□□□ -1
COMMD4-216ENST00000567023 A0A087WZ39 114 aa8.77□□□□□ -1.01
COMMD4-216ENST00000567023 NDUFA1O15239 70 aa8.77□□□□□ -1.01
COMMD4-216ENST00000567023 LINC00173Q6ZV60 143 aa8.77□□□□□ -1.01
COMMD4-216ENST00000567023 AMELXQ99217 191 aa8.77□□□□□ -1.01
COMMD4-216ENST00000567023 SMCO4Q9NRQ5 59 aa8.77□□□□□ -1.01
COMMD4-216ENST00000567023 PSORS1C2Q9UIG4 136 aa8.77□□□□□ -1.01
COMMD4-216ENST00000567023 LINC00242Q5T6M2 205 aa8.76□□□□□ -1.01
COMMD4-216ENST00000567023 C10orf25Q5T742 122 aa8.76□□□□□ -1.01
COMMD4-216ENST00000567023 CBLN2Q8IUK8 224 aa8.76□□□□□ -1.01
COMMD4-216ENST00000567023 TIMM17AQ99595 171 aa8.76□□□□□ -1.01
COMMD4-216ENST00000567023 UBE2D1P51668 147 aa8.75□□□□□ -1.01
COMMD4-216ENST00000567023 KIAA0087Q14695 138 aa8.75□□□□□ -1.01
COMMD4-216ENST00000567023 UNQ6190/PRO20217Q6UXQ8 127 aa8.75□□□□□ -1.01
COMMD4-216ENST00000567023 Q6ZN92 141 aa8.75□□□□□ -1.01
COMMD4-216ENST00000567023 TEX43Q6ZNM6 134 aa8.75□□□□□ -1.01
COMMD4-216ENST00000567023 C18orf32Q8TCD1 76 aa8.75□□□□□ -1.01
COMMD4-216ENST00000567023 LINC01549A6NIU2 74 aa8.74□□□□□ -1.01
COMMD4-216ENST00000567023 FA2HQ7L5A8 372 aa8.74□□□□□ -1.01
COMMD4-216ENST00000567023 PHF5AQ7RTV0 110 aaKnown RBP8.74□□□□□ -1.01
COMMD4-216ENST00000567023 ERASQ7Z444 233 aa8.74□□□□□ -1.01
COMMD4-216ENST00000567023 FAM19A3Q7Z5A8 133 aa8.74□□□□□ -1.01
COMMD4-216ENST00000567023 LINC01561Q8N1V8 128 aa8.74□□□□□ -1.01
COMMD4-216ENST00000567023 URB1-AS1Q96HZ7 61 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms