RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 IGHV3-64A0A075B6Q5 118 aa6.41□□□□□ -1.38
CDH1-206ENST00000564676 GVQW2A0A096LPI5 108 aaPredicted RBP6.41□□□□□ -1.38
CDH1-206ENST00000564676 IFITM10A6NMD0 228 aa6.41□□□□□ -1.38
CDH1-206ENST00000564676 K7EMI3 77 aa6.41□□□□□ -1.38
CDH1-206ENST00000564676 COX7A2LO14548 114 aa6.41□□□□□ -1.38
CDH1-206ENST00000564676 MT-ND6P03923 174 aa6.41□□□□□ -1.38
CDH1-206ENST00000564676 SLPIP03973 132 aa6.41□□□□□ -1.38
CDH1-206ENST00000564676 Q5VSD8 79 aa6.41□□□□□ -1.38
CDH1-206ENST00000564676 C2orf66Q6UXQ4 117 aa6.41□□□□□ -1.38
CDH1-206ENST00000564676 SCXQ7RTU7 201 aa6.41□□□□□ -1.38
CDH1-206ENST00000564676 C5orf38Q86SI9 138 aa6.41□□□□□ -1.38
CDH1-206ENST00000564676 PRSS3P2Q8NHM4 247 aa6.41□□□□□ -1.38
CDH1-206ENST00000564676 CHAC1Q9BUX1 264 aa6.41□□□□□ -1.38
CDH1-206ENST00000564676 PYGO1Q9Y3Y4 419 aa6.41□□□□□ -1.38
CDH1-206ENST00000564676 TGIF2-C20orf24A0A0A6YYL0 155 aa6.4□□□□□ -1.38
CDH1-206ENST00000564676 ZNF561-AS1K7EIQ3 104 aa6.4□□□□□ -1.38
CDH1-206ENST00000564676 G0S2P27469 103 aa6.4□□□□□ -1.38
CDH1-206ENST00000564676 SDIM1Q6ZPB5 146 aa6.4□□□□□ -1.38
CDH1-206ENST00000564676 FAM104AQ969W3 186 aa6.4□□□□□ -1.38
CDH1-206ENST00000564676 LINC00526Q96FQ7 95 aa6.4□□□□□ -1.38
CDH1-206ENST00000564676 DPH3Q96FX2 82 aa6.4□□□□□ -1.38
CDH1-206ENST00000564676 PCLOQ9Y6V0 5065 aa6.4□□□□□ -1.39
CDH1-206ENST00000564676 IGLV4-3A0A075B6K6 122 aa6.39□□□□□ -1.39
CDH1-206ENST00000564676 APOMO95445 188 aa6.39□□□□□ -1.39
CDH1-206ENST00000564676 Q6ZN92 141 aa6.39□□□□□ -1.39
CDH1-206ENST00000564676 TEX43Q6ZNM6 134 aa6.39□□□□□ -1.39
CDH1-206ENST00000564676 CIRBP-AS1Q8TBR5 109 aa6.39□□□□□ -1.39
CDH1-206ENST00000564676 TMEM141Q96I45 108 aa6.39□□□□□ -1.39
CDH1-206ENST00000564676 ALKBH7Q9BT30 221 aaPredicted RBP6.39□□□□□ -1.39
CDH1-206ENST00000564676 TRAPPC1Q9Y5R8 145 aa6.39□□□□□ -1.39
CDH1-206ENST00000564676 C2orf88Q9BSF0 95 aa6.38□□□□□ -1.39
CDH1-206ENST00000564676 VCX2Q9H322 139 aa6.38□□□□□ -1.39
CDH1-206ENST00000564676 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.38□□□□□ -1.39
CDH1-206ENST00000564676 COX6A2Q02221 97 aa6.37□□□□□ -1.39
CDH1-206ENST00000564676 SYCNQ0VAF6 134 aa6.37□□□□□ -1.39
CDH1-206ENST00000564676 FA2HQ7L5A8 372 aa6.37□□□□□ -1.39
CDH1-206ENST00000564676 CARD19Q96LW7 228 aa6.37□□□□□ -1.39
CDH1-206ENST00000564676 SMCO4Q9NRQ5 59 aa6.37□□□□□ -1.39
CDH1-206ENST00000564676 IGLV4-69A0A075B6H9 119 aa6.36□□□□□ -1.39
CDH1-206ENST00000564676 IGHV3OR16-9A0A0B4J2B5 98 aa6.36□□□□□ -1.39
CDH1-206ENST00000564676 IGIPA6NJ69 53 aa6.36□□□□□ -1.39
CDH1-206ENST00000564676 PANO1I0J062 215 aa6.36□□□□□ -1.39
CDH1-206ENST00000564676 PLA2G1BP04054 148 aaKnown RBP6.36□□□□□ -1.39
CDH1-206ENST00000564676 NPSP0C0P6 89 aa6.36□□□□□ -1.39
CDH1-206ENST00000564676 CHTF8P0CG12 524 aa6.36□□□□□ -1.39
CDH1-206ENST00000564676 INAFM2P0DMQ5 153 aa6.36□□□□□ -1.39
CDH1-206ENST00000564676 SPAG11BQ08648 103 aa6.36□□□□□ -1.39
CDH1-206ENST00000564676 PAPPA-AS1Q5QFB9 102 aa6.36□□□□□ -1.39
CDH1-206ENST00000564676 ZC2HC1BQ5TFG8 222 aa6.36□□□□□ -1.39
CDH1-206ENST00000564676 TOMM6Q96B49 74 aa6.36□□□□□ -1.39
CDH1-206ENST00000564676 SCGB3A1Q96QR1 104 aa6.36□□□□□ -1.39
CDH1-206ENST00000564676 IGKV2-24A0A0C4DH68 120 aa6.35□□□□□ -1.39
CDH1-206ENST00000564676 UBE2D1P51668 147 aa6.35□□□□□ -1.39
CDH1-206ENST00000564676 LINC00242Q5T6M2 205 aa6.35□□□□□ -1.39
CDH1-206ENST00000564676 SLC7A5P1Q8MH63 180 aa6.35□□□□□ -1.39
CDH1-206ENST00000564676 ORAOV1Q8WV07 137 aa6.35□□□□□ -1.39
CDH1-206ENST00000564676 CAMK2N2Q96S95 79 aa6.35□□□□□ -1.39
CDH1-206ENST00000564676 AMELXQ99217 191 aa6.35□□□□□ -1.39
CDH1-206ENST00000564676 TIMM17AQ99595 171 aa6.35□□□□□ -1.39
CDH1-206ENST00000564676 PKIGQ9Y2B9 76 aa6.35□□□□□ -1.39
CDH1-206ENST00000564676 VPS13BQ7Z7G8 4022 aa6.34□□□□□ -1.39
CDH1-206ENST00000564676 LINC01546A6NGU7 62 aa6.34□□□□□ -1.39
CDH1-206ENST00000564676 LINC01549A6NIU2 74 aa6.34□□□□□ -1.39
CDH1-206ENST00000564676 CIRBPQ14011 172 aaKnown RBP6.34□□□□□ -1.39
CDH1-206ENST00000564676 MAJINQ3KP22 176 aa6.34□□□□□ -1.39
CDH1-206ENST00000564676 LINC00173Q6ZV60 143 aa6.34□□□□□ -1.39
CDH1-206ENST00000564676 OR10D4PQ8NGN7 298 aa6.34□□□□□ -1.39
CDH1-206ENST00000564676 C2orf48Q96LS8 159 aa6.34□□□□□ -1.39
CDH1-206ENST00000564676 A0A087WYN8 130 aa6.33□□□□□ -1.4
CDH1-206ENST00000564676 A0A087WZ39 114 aa6.33□□□□□ -1.4
CDH1-206ENST00000564676 Q6ZRU5 148 aa6.33□□□□□ -1.4
CDH1-206ENST00000564676 ERASQ7Z444 233 aa6.33□□□□□ -1.4
CDH1-206ENST00000564676 SPACA4Q8TDM5 124 aa6.33□□□□□ -1.4
CDH1-206ENST00000564676 A0A096LNI7 61 aa6.32□□□□□ -1.4
CDH1-206ENST00000564676 SEC11AP67812 179 aa6.32□□□□□ -1.4
CDH1-206ENST00000564676 GAGE2BQ13066 116 aa6.32□□□□□ -1.4
CDH1-206ENST00000564676 C18orf32Q8TCD1 76 aa6.32□□□□□ -1.4
CDH1-206ENST00000564676 YPEL4Q96NS1 127 aa6.32□□□□□ -1.4
CDH1-206ENST00000564676 GEMIN7Q9H840 131 aaKnown RBP6.32□□□□□ -1.4
CDH1-206ENST00000564676 LOC107984640A0A0U1RRK4 108 aa6.31□□□□□ -1.4
CDH1-206ENST00000564676 F8WDY8 70 aa6.31□□□□□ -1.4
CDH1-206ENST00000564676 NDUFA1O15239 70 aa6.31□□□□□ -1.4
CDH1-206ENST00000564676 LINC00614P0C842 121 aa6.31□□□□□ -1.4
CDH1-206ENST00000564676 RAB5BP61020 215 aa6.31□□□□□ -1.4
CDH1-206ENST00000564676 HERVK_113P63121 156 aa6.31□□□□□ -1.4
CDH1-206ENST00000564676 CBLN2Q8IUK8 224 aa6.31□□□□□ -1.4
CDH1-206ENST00000564676 LINC01561Q8N1V8 128 aa6.31□□□□□ -1.4
CDH1-206ENST00000564676 LINC00474Q9P2X8 69 aa6.31□□□□□ -1.4
CDH1-206ENST00000564676 A0A0J9YXV3 536 aa6.3□□□□□ -1.4
CDH1-206ENST00000564676 RPL37AP61513 92 aaKnown RBP6.3□□□□□ -1.4
CDH1-206ENST00000564676 FAM19A3Q7Z5A8 133 aa6.3□□□□□ -1.4
CDH1-206ENST00000564676 STPG4Q8N801 248 aa6.3□□□□□ -1.4
CDH1-206ENST00000564676 PACRGQ96M98 296 aaPredicted RBP6.3□□□□□ -1.4
CDH1-206ENST00000564676 PLAC8Q9NZF1 115 aa6.3□□□□□ -1.4
CDH1-206ENST00000564676 FLG2Q5D862 2391 aaPredicted RBP6.3□□□□□ -1.4
CDH1-206ENST00000564676 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.29□□□□□ -1.4
CDH1-206ENST00000564676 PRSS2P07478 247 aa6.29□□□□□ -1.4
CDH1-206ENST00000564676 PTTG1IPP53801 180 aa6.29□□□□□ -1.4
CDH1-206ENST00000564676 RPL18AQ02543 176 aaKnown RBP6.29□□□□□ -1.4
CDH1-206ENST00000564676 PMVKQ15126 192 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms