RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 OPRPNQ99935 248 aaPredicted RBP3.77□□□□□ -1.81
CDH13-206ENST00000562601 C20orf78Q9BR46 151 aa3.77□□□□□ -1.81
CDH13-206ENST00000562601 SMIM2Q9BVW6 85 aa3.77□□□□□ -1.81
CDH13-206ENST00000562601 RPS10P5Q9NQ39 176 aa3.77□□□□□ -1.81
CDH13-206ENST00000562601 CDC42SE2Q9NRR3 84 aa3.77□□□□□ -1.81
CDH13-206ENST00000562601 LINC00959A0A1B0GUT2 108 aa3.76□□□□□ -1.81
CDH13-206ENST00000562601 hDV102S1A0JD36 115 aa3.76□□□□□ -1.81
CDH13-206ENST00000562601 KRTAP29-1A8MX34 341 aaPredicted RBP3.76□□□□□ -1.81
CDH13-206ENST00000562601 CCL25O15444 150 aa3.76□□□□□ -1.81
CDH13-206ENST00000562601 APOC3P02656 99 aa3.76□□□□□ -1.81
CDH13-206ENST00000562601 PPBPP02775 128 aa3.76□□□□□ -1.81
CDH13-206ENST00000562601 ZNF25P17030 456 aaPredicted RBP3.76□□□□□ -1.81
CDH13-206ENST00000562601 HIGD2BQ4VC39 106 aa3.76□□□□□ -1.81
CDH13-206ENST00000562601 C14orf177Q52M58 125 aa3.76□□□□□ -1.81
CDH13-206ENST00000562601 MRPL52Q86TS9 123 aaKnown RBP3.76□□□□□ -1.81
CDH13-206ENST00000562601 IMMP2LQ96T52 175 aa3.76□□□□□ -1.81
CDH13-206ENST00000562601 UBE2D4Q9Y2X8 147 aa3.76□□□□□ -1.81
CDH13-206ENST00000562601 SRRM2Q9UQ35 2752 aaKnown RBP3.76□□□□□ -1.81
CDH13-206ENST00000562601 TRAV13-1A0A0B4J241 112 aa3.75□□□□□ -1.81
CDH13-206ENST00000562601 PHOX2AO14813 284 aa3.75□□□□□ -1.81
CDH13-206ENST00000562601 RAB5AP20339 215 aa3.75□□□□□ -1.81
CDH13-206ENST00000562601 S100PP25815 95 aa3.75□□□□□ -1.81
CDH13-206ENST00000562601 IFI27P40305 119 aaPredicted RBP3.75□□□□□ -1.81
CDH13-206ENST00000562601 RPL32P62910 135 aaKnown RBP3.75□□□□□ -1.81
CDH13-206ENST00000562601 SS18Q15532 418 aa3.75□□□□□ -1.81
CDH13-206ENST00000562601 Q6ZUT4 128 aa3.75□□□□□ -1.81
CDH13-206ENST00000562601 LINC00526Q96FQ7 95 aa3.75□□□□□ -1.81
CDH13-206ENST00000562601 MAP1LC3AQ9H492 121 aa3.75□□□□□ -1.81
CDH13-206ENST00000562601 CARHSP1Q9Y2V2 147 aaKnown RBP3.75□□□□□ -1.81
CDH13-206ENST00000562601 TGIF2-C20orf24A0A0A6YYL0 155 aa3.74□□□□□ -1.81
CDH13-206ENST00000562601 RHEBQ15382 184 aa3.74□□□□□ -1.81
CDH13-206ENST00000562601 SLC7A5P1Q8MH63 180 aa3.74□□□□□ -1.81
CDH13-206ENST00000562601 Q8N8P6 123 aa3.74□□□□□ -1.81
CDH13-206ENST00000562601 C15orf56Q8N910 161 aa3.74□□□□□ -1.81
CDH13-206ENST00000562601 FAM104AQ969W3 186 aa3.74□□□□□ -1.81
CDH13-206ENST00000562601 TMEM18Q96B42 140 aa3.74□□□□□ -1.81
CDH13-206ENST00000562601 TRAV9-1A0A075B6T8 112 aa3.73□□□□□ -1.81
CDH13-206ENST00000562601 PANO1I0J062 215 aa3.73□□□□□ -1.81
CDH13-206ENST00000562601 SMAGPQ0VAQ4 97 aa3.73□□□□□ -1.81
CDH13-206ENST00000562601 FABP9Q0Z7S8 132 aa3.73□□□□□ -1.81
CDH13-206ENST00000562601 ZC2HC1BQ5TFG8 222 aa3.73□□□□□ -1.81
CDH13-206ENST00000562601 C5orf38Q86SI9 138 aa3.73□□□□□ -1.81
CDH13-206ENST00000562601 TIMM21Q9BVV7 248 aa3.73□□□□□ -1.81
CDH13-206ENST00000562601 PKHD1L1Q86WI1 4243 aa3.73□□□□□ -1.81
CDH13-206ENST00000562601 IGLV4-3A0A075B6K6 122 aa3.72□□□□□ -1.81
CDH13-206ENST00000562601 IFITM10A6NMD0 228 aa3.72□□□□□ -1.81
CDH13-206ENST00000562601 C1orf196B1AJZ1 125 aa3.72□□□□□ -1.81
CDH13-206ENST00000562601 EPM2AB3EWF7 344 aa3.72□□□□□ -1.81
CDH13-206ENST00000562601 SNAPINO95295 136 aa3.72□□□□□ -1.81
CDH13-206ENST00000562601 NDUFA5Q16718 116 aa3.72□□□□□ -1.81
CDH13-206ENST00000562601 Q5VSD8 79 aa3.72□□□□□ -1.81
CDH13-206ENST00000562601 CD164L2Q6UWJ8 174 aa3.72□□□□□ -1.81
CDH13-206ENST00000562601 Q6ZSA8 131 aa3.72□□□□□ -1.81
CDH13-206ENST00000562601 SCXQ7RTU7 201 aa3.72□□□□□ -1.81
CDH13-206ENST00000562601 C9orf163Q8N9P6 203 aa3.72□□□□□ -1.81
CDH13-206ENST00000562601 URB1-AS1Q96HZ7 61 aa3.72□□□□□ -1.81
CDH13-206ENST00000562601 ALKBH7Q9BT30 221 aaPredicted RBP3.72□□□□□ -1.81
CDH13-206ENST00000562601 GNB1LQ9BYB4 327 aa3.72□□□□□ -1.81
CDH13-206ENST00000562601 SPANXA1Q9NS26 97 aa3.72□□□□□ -1.81
CDH13-206ENST00000562601 LAMTOR2Q9Y2Q5 125 aa3.72□□□□□ -1.81
CDH13-206ENST00000562601 CSDC2Q9Y534 153 aaKnown RBP3.72□□□□□ -1.81
CDH13-206ENST00000562601 IGHV3-64A0A075B6Q5 118 aa3.71□□□□□ -1.82
CDH13-206ENST00000562601 GVQW2A0A096LPI5 108 aaPredicted RBP3.71□□□□□ -1.82
CDH13-206ENST00000562601 A0A0A0MQY5 61 aa3.71□□□□□ -1.82
CDH13-206ENST00000562601 IGHV1-58A0A0C4DH39 117 aa3.71□□□□□ -1.82
CDH13-206ENST00000562601 COX7A2LO14548 114 aa3.71□□□□□ -1.82
CDH13-206ENST00000562601 CHTF8P0CG12 524 aa3.71□□□□□ -1.82
CDH13-206ENST00000562601 CNBPP62633 177 aaKnown RBP3.71□□□□□ -1.82
CDH13-206ENST00000562601 MRPS36P82909 103 aaKnown RBP3.71□□□□□ -1.82
CDH13-206ENST00000562601 ORMDL2Q53FV1 153 aa3.71□□□□□ -1.82
CDH13-206ENST00000562601 C2orf66Q6UXQ4 117 aa3.71□□□□□ -1.82
CDH13-206ENST00000562601 SDIM1Q6ZPB5 146 aa3.71□□□□□ -1.82
CDH13-206ENST00000562601 SVBPQ8N300 66 aa3.71□□□□□ -1.82
CDH13-206ENST00000562601 CIRBP-AS1Q8TBR5 109 aa3.71□□□□□ -1.82
CDH13-206ENST00000562601 DPH3Q96FX2 82 aa3.71□□□□□ -1.82
CDH13-206ENST00000562601 CHAC1Q9BUX1 264 aa3.71□□□□□ -1.82
CDH13-206ENST00000562601 NXT2Q9NPJ8 142 aaKnown RBP3.71□□□□□ -1.82
CDH13-206ENST00000562601 TRAPPC1Q9Y5R8 145 aa3.71□□□□□ -1.82
CDH13-206ENST00000562601 IGLV4-69A0A075B6H9 119 aa3.7□□□□□ -1.82
CDH13-206ENST00000562601 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.7□□□□□ -1.82
CDH13-206ENST00000562601 PRSS2P07478 247 aa3.7□□□□□ -1.82
CDH13-206ENST00000562601 COX6A2Q02221 97 aa3.7□□□□□ -1.82
CDH13-206ENST00000562601 CBLN2Q8IUK8 224 aa3.7□□□□□ -1.82
CDH13-206ENST00000562601 PRR26Q8N8Z3 221 aa3.7□□□□□ -1.82
CDH13-206ENST00000562601 TMEM141Q96I45 108 aa3.7□□□□□ -1.82
CDH13-206ENST00000562601 CYSLTR1Q9Y271 337 aa3.7□□□□□ -1.82
CDH13-206ENST00000562601 PYGO1Q9Y3Y4 419 aa3.7□□□□□ -1.82
CDH13-206ENST00000562601 IGKV2-24A0A0C4DH68 120 aa3.69□□□□□ -1.82
CDH13-206ENST00000562601 A0A0J9YXV3 536 aa3.69□□□□□ -1.82
CDH13-206ENST00000562601 IGIPA6NJ69 53 aa3.69□□□□□ -1.82
CDH13-206ENST00000562601 MT-ND6P03923 174 aa3.69□□□□□ -1.82
CDH13-206ENST00000562601 INAFM2P0DMQ5 153 aa3.69□□□□□ -1.82
CDH13-206ENST00000562601 SYCNQ0VAF6 134 aa3.69□□□□□ -1.82
CDH13-206ENST00000562601 MAJINQ3KP22 176 aa3.69□□□□□ -1.82
CDH13-206ENST00000562601 COX19Q49B96 90 aa3.69□□□□□ -1.82
CDH13-206ENST00000562601 LINC00242Q5T6M2 205 aa3.69□□□□□ -1.82
CDH13-206ENST00000562601 TEX43Q6ZNM6 134 aa3.69□□□□□ -1.82
CDH13-206ENST00000562601 LINC00173Q6ZV60 143 aa3.69□□□□□ -1.82
CDH13-206ENST00000562601 FA2HQ7L5A8 372 aa3.69□□□□□ -1.82
CDH13-206ENST00000562601 TOMM6Q96B49 74 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms