RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 MYOM3Q5VTT5 1437 aa-0.76□□□□□ -2.53
DENND4A-205ENST00000562540 SHANK2Q9UPX8 1470 aa-0.76□□□□□ -2.53
DENND4A-205ENST00000562540 MXRA5Q9NR99 2828 aa-0.76□□□□□ -2.53
DENND4A-205ENST00000562540 LAMA5O15230 3695 aa-0.76□□□□□ -2.53
DENND4A-205ENST00000562540 FXYD6Q9H0Q3 95 aa-0.77□□□□□ -2.53
DENND4A-205ENST00000562540 POLA1P09884 1462 aaPredicted RBP-0.78□□□□□ -2.53
DENND4A-205ENST00000562540 HMGN4O00479 90 aa-0.78□□□□□ -2.53
DENND4A-205ENST00000562540 SFT2D2O95562 160 aa-0.78□□□□□ -2.53
DENND4A-205ENST00000562540 DEFB123Q8N688 67 aa-0.78□□□□□ -2.53
DENND4A-205ENST00000562540 ARL11Q969Q4 196 aa-0.78□□□□□ -2.53
DENND4A-205ENST00000562540 SPANXDQ9BXN6 97 aa-0.78□□□□□ -2.53
DENND4A-205ENST00000562540 Q56UQ5 140 aa-0.79□□□□□ -2.54
DENND4A-205ENST00000562540 MRPL54Q6P161 138 aaKnown RBP-0.79□□□□□ -2.54
DENND4A-205ENST00000562540 LINC00470Q9BZP3 86 aa-0.79□□□□□ -2.54
DENND4A-205ENST00000562540 GNG7O60262 68 aa-0.8□□□□□ -2.54
DENND4A-205ENST00000562540 PCNX1Q96RV3 2341 aa-0.8□□□□□ -2.54
DENND4A-205ENST00000562540 ITPR3Q14573 2671 aa-0.8□□□□□ -2.54
DENND4A-205ENST00000562540 BTAF1O14981 1849 aa-0.8□□□□□ -2.54
DENND4A-205ENST00000562540 MIF4GDA9UHW6 222 aaKnown RBP-0.81□□□□□ -2.54
DENND4A-205ENST00000562540 SSSCA1O60232 199 aa-0.81□□□□□ -2.54
DENND4A-205ENST00000562540 IFNGP01579 166 aa-0.81□□□□□ -2.54
DENND4A-205ENST00000562540 APOC2P02655 101 aa-0.81□□□□□ -2.54
DENND4A-205ENST00000562540 MGPP08493 103 aa-0.81□□□□□ -2.54
DENND4A-205ENST00000562540 C8orf59Q8N0T1 100 aaPredicted RBP-0.81□□□□□ -2.54
DENND4A-205ENST00000562540 TMEM263Q8WUH6 116 aaKnown RBP-0.81□□□□□ -2.54
DENND4A-205ENST00000562540 USP9YO00507 2555 aaPredicted RBP-0.81□□□□□ -2.54
DENND4A-205ENST00000562540 PRKDCP78527 4128 aaKnown RBP-0.81□□□□□ -2.54
DENND4A-205ENST00000562540 NBEAL2Q6ZNJ1 2754 aa-0.81□□□□□ -2.54
DENND4A-205ENST00000562540 RIMS1Q86UR5 1692 aaKnown RBP-0.81□□□□□ -2.54
DENND4A-205ENST00000562540 CATR1Q13166 79 aa-0.82□□□□□ -2.54
DENND4A-205ENST00000562540 CCDC58Q4VC31 144 aa-0.82□□□□□ -2.54
DENND4A-205ENST00000562540 MYOZ3Q8TDC0 251 aa-0.82□□□□□ -2.54
DENND4A-205ENST00000562540 FAIMQ9NVQ4 179 aa-0.82□□□□□ -2.54
DENND4A-205ENST00000562540 EPG5Q9HCE0 2579 aa-0.82□□□□□ -2.54
DENND4A-205ENST00000562540 RAPGEF6Q8TEU7 1601 aa-0.82□□□□□ -2.54
DENND4A-205ENST00000562540 UNC13AQ9UPW8 1703 aa-0.83□□□□□ -2.54
DENND4A-205ENST00000562540 GAPVD1Q14C86 1478 aa-0.83□□□□□ -2.54
DENND4A-205ENST00000562540 TRBV7-4A0A0J9YYF1 115 aa-0.83□□□□□ -2.54
DENND4A-205ENST00000562540 CHKB-CPT1BH3BT56 60 aa-0.83□□□□□ -2.54
DENND4A-205ENST00000562540 M0R2T5 61 aa-0.83□□□□□ -2.54
DENND4A-205ENST00000562540 UBA52P62987 128 aaKnown RBP-0.83□□□□□ -2.54
DENND4A-205ENST00000562540 BTG2P78543 158 aa-0.83□□□□□ -2.54
DENND4A-205ENST00000562540 DEFB105AQ8NG35 78 aa-0.83□□□□□ -2.54
DENND4A-205ENST00000562540 NXT2Q9NPJ8 142 aaKnown RBP-0.83□□□□□ -2.54
DENND4A-205ENST00000562540 CPSF1Q10570 1443 aaKnown RBP-0.83□□□□□ -2.54
DENND4A-205ENST00000562540 RIF1Q5UIP0 2472 aaKnown RBP-0.83□□□□□ -2.54
DENND4A-205ENST00000562540 WHAMMP3Q1A5X7 153 aa-0.84□□□□□ -2.54
DENND4A-205ENST00000562540 KLK9Q2XQG4 91 aa-0.84□□□□□ -2.54
DENND4A-205ENST00000562540 C10orf113Q5VZT2 155 aa-0.84□□□□□ -2.54
DENND4A-205ENST00000562540 COMMD6Q7Z4G1 85 aa-0.84□□□□□ -2.54
DENND4A-205ENST00000562540 C5orf38Q86SI9 138 aa-0.84□□□□□ -2.54
DENND4A-205ENST00000562540 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.84□□□□□ -2.54
DENND4A-205ENST00000562540 NAIPQ13075 1403 aa-0.84□□□□□ -2.54
DENND4A-205ENST00000562540 FOCADQ5VW36 1801 aa-0.85□□□□□ -2.54
DENND4A-205ENST00000562540 FLGP20930 4061 aaPredicted RBP-0.85□□□□□ -2.55
DENND4A-205ENST00000562540 IGLC1P0CG04 106 aa-0.85□□□□□ -2.55
DENND4A-205ENST00000562540 DNHD1Q96M86 4753 aa-0.85□□□□□ -2.55
DENND4A-205ENST00000562540 ARHGEF12Q9NZN5 1544 aa-0.85□□□□□ -2.55
DENND4A-205ENST00000562540 HECTD1Q9ULT8 2610 aa-0.85□□□□□ -2.55
DENND4A-205ENST00000562540 FASNP49327 2511 aaKnown RBP-0.86□□□□□ -2.55
DENND4A-205ENST00000562540 FGF7P21781 194 aa-0.86□□□□□ -2.55
DENND4A-205ENST00000562540 FDCSPQ8NFU4 85 aa-0.86□□□□□ -2.55
DENND4A-205ENST00000562540 SPRR4Q96PI1 79 aa-0.86□□□□□ -2.55
DENND4A-205ENST00000562540 LINC00474Q9P2X8 69 aa-0.86□□□□□ -2.55
DENND4A-205ENST00000562540 UQCR10Q9UDW1 63 aa-0.86□□□□□ -2.55
DENND4A-205ENST00000562540 KDM5AP29375 1690 aaKnown RBP-0.86□□□□□ -2.55
DENND4A-205ENST00000562540 SVEP1Q4LDE5 3571 aa-0.87□□□□□ -2.55
DENND4A-205ENST00000562540 NSD3Q9BZ95 1437 aa-0.87□□□□□ -2.55
DENND4A-205ENST00000562540 COL6A5A8TX70 2615 aa-0.87□□□□□ -2.55
DENND4A-205ENST00000562540 SYS1-DBNDD2H3BUS1 97 aa-0.87□□□□□ -2.55
DENND4A-205ENST00000562540 NDUFA2O43678 99 aa-0.87□□□□□ -2.55
DENND4A-205ENST00000562540 LINC00959A0A1B0GUT2 108 aa-0.88□□□□□ -2.55
DENND4A-205ENST00000562540 COX8AP10176 69 aa-0.88□□□□□ -2.55
DENND4A-205ENST00000562540 CDC42SE2Q9NRR3 84 aa-0.88□□□□□ -2.55
DENND4A-205ENST00000562540 ARL2-SNX15V9GYD0 113 aa-0.88□□□□□ -2.55
DENND4A-205ENST00000562540 MYO18BQ8IUG5 2567 aa-0.88□□□□□ -2.55
DENND4A-205ENST00000562540 BICRAQ9NZM4 1560 aa-0.88□□□□□ -2.55
DENND4A-205ENST00000562540 LOC100130705A0A1B0GUX0 176 aa-0.89□□□□□ -2.55
DENND4A-205ENST00000562540 USMG5Q96IX5 58 aa-0.89□□□□□ -2.55
DENND4A-205ENST00000562540 PKHD1P08F94 4074 aa-0.9□□□□□ -2.55
DENND4A-205ENST00000562540 IQSEC2Q5JU85 1478 aa-0.9□□□□□ -2.55
DENND4A-205ENST00000562540 AKAIN1P0CW23 69 aa-0.9□□□□□ -2.55
DENND4A-205ENST00000562540 FAM223AQ8IWN6 122 aa-0.9□□□□□ -2.55
DENND4A-205ENST00000562540 TSC22D3Q99576 134 aa-0.9□□□□□ -2.55
DENND4A-205ENST00000562540 PHLPP1O60346 1717 aa-0.9□□□□□ -2.55
DENND4A-205ENST00000562540 TULP4Q9NRJ4 1543 aa-0.9□□□□□ -2.55
DENND4A-205ENST00000562540 ZFHX3Q15911 3703 aa-0.9□□□□□ -2.55
DENND4A-205ENST00000562540 KNL1Q8NG31 2342 aa-0.9□□□□□ -2.55
DENND4A-205ENST00000562540 MYOM1P52179 1685 aa-0.91□□□□□ -2.55
DENND4A-205ENST00000562540 OOSP1A8MZH6 123 aa-0.91□□□□□ -2.56
DENND4A-205ENST00000562540 LINC01600Q96MT4 127 aa-0.91□□□□□ -2.56
DENND4A-205ENST00000562540 PRO1933Q9H354 126 aa-0.91□□□□□ -2.56
DENND4A-205ENST00000562540 NBASA2RRP1 2371 aa-0.91□□□□□ -2.56
DENND4A-205ENST00000562540 DSPP15924 2871 aaKnown RBP-0.91□□□□□ -2.56
DENND4A-205ENST00000562540 SETBP1Q9Y6X0 1596 aa-0.91□□□□□ -2.56
DENND4A-205ENST00000562540 UBE2L5PA0A1B0GUS4 154 aa-0.92□□□□□ -2.56
DENND4A-205ENST00000562540 K7EP13 123 aa-0.92□□□□□ -2.56
DENND4A-205ENST00000562540 GNG11P61952 73 aa-0.92□□□□□ -2.56
DENND4A-205ENST00000562540 UBE2L3P68036 154 aaKnown RBP-0.92□□□□□ -2.56
DENND4A-205ENST00000562540 FAM167A-AS1Q96KT0 104 aa-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms