RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 ANAPC11Q9NYG5 84 aa6.93□□□□□ -1.3
NSMCE1-202ENST00000561960 A0A1B0GUT8 65 aa6.92□□□□□ -1.3
NSMCE1-202ENST00000561960 LINC00862A6NCI5 91 aa6.92□□□□□ -1.3
NSMCE1-202ENST00000561960 C9orf129Q5T035 196 aaKnown RBP6.92□□□□□ -1.3
NSMCE1-202ENST00000561960 TMEM191AQ9H0A3 160 aa6.92□□□□□ -1.3
NSMCE1-202ENST00000561960 MRPL35Q9NZE8 188 aaKnown RBP6.92□□□□□ -1.3
NSMCE1-202ENST00000561960 A0A087X002 238 aa6.91□□□□□ -1.3
NSMCE1-202ENST00000561960 VCYO14598 125 aa6.91□□□□□ -1.3
NSMCE1-202ENST00000561960 SUMO2P61956 95 aaKnown RBP6.91□□□□□ -1.3
NSMCE1-202ENST00000561960 OR10D4PQ8NGN7 298 aa6.91□□□□□ -1.3
NSMCE1-202ENST00000561960 IMMP2LQ96T52 175 aa6.91□□□□□ -1.3
NSMCE1-202ENST00000561960 SMDT1Q9H4I9 107 aa6.91□□□□□ -1.3
NSMCE1-202ENST00000561960 IFITM10A6NMD0 228 aa6.9□□□□□ -1.3
NSMCE1-202ENST00000561960 RNF151Q2KHN1 245 aa6.9□□□□□ -1.3
NSMCE1-202ENST00000561960 KIR2DL4Q99706 377 aa6.9□□□□□ -1.3
NSMCE1-202ENST00000561960 IGHV3OR16-9A0A0B4J2B5 98 aa6.89□□□□□ -1.31
NSMCE1-202ENST00000561960 TCAPO15273 167 aa6.89□□□□□ -1.31
NSMCE1-202ENST00000561960 RPL13AP40429 203 aaKnown RBP6.89□□□□□ -1.31
NSMCE1-202ENST00000561960 MRPL51Q4U2R6 128 aaKnown RBP6.89□□□□□ -1.31
NSMCE1-202ENST00000561960 ZC2HC1BQ5TFG8 222 aa6.89□□□□□ -1.31
NSMCE1-202ENST00000561960 FAM231DQ6ZW35 169 aa6.89□□□□□ -1.31
NSMCE1-202ENST00000561960 RAB14P61106 215 aa6.88□□□□□ -1.31
NSMCE1-202ENST00000561960 TSKUQ8WUA8 353 aa6.88□□□□□ -1.31
NSMCE1-202ENST00000561960 CSDC2Q9Y534 153 aaKnown RBP6.88□□□□□ -1.31
NSMCE1-202ENST00000561960 KIAA0087Q14695 138 aa6.87□□□□□ -1.31
NSMCE1-202ENST00000561960 LINC00242Q5T6M2 205 aa6.87□□□□□ -1.31
NSMCE1-202ENST00000561960 COMMD7Q86VX2 200 aa6.87□□□□□ -1.31
NSMCE1-202ENST00000561960 XAGE1AQ9HD64 81 aa6.87□□□□□ -1.31
NSMCE1-202ENST00000561960 TLX1NBP0CAT3 122 aa6.86□□□□□ -1.31
NSMCE1-202ENST00000561960 CLLU1Q5K131 121 aa6.86□□□□□ -1.31
NSMCE1-202ENST00000561960 ALKAL2Q6UX46 152 aa6.86□□□□□ -1.31
NSMCE1-202ENST00000561960 LINC01551Q86U37 167 aa6.86□□□□□ -1.31
NSMCE1-202ENST00000561960 SMIM7Q9BQ49 75 aa6.86□□□□□ -1.31
NSMCE1-202ENST00000561960 CTDSP1Q9GZU7 261 aa6.86□□□□□ -1.31
NSMCE1-202ENST00000561960 ZNF861PO60384 105 aa6.85□□□□□ -1.31
NSMCE1-202ENST00000561960 HBBP68871 147 aa6.85□□□□□ -1.31
NSMCE1-202ENST00000561960 RIGQ13278 110 aa6.85□□□□□ -1.31
NSMCE1-202ENST00000561960 CT83Q5H943 113 aa6.85□□□□□ -1.31
NSMCE1-202ENST00000561960 TYMSOSQ8TAI1 123 aa6.85□□□□□ -1.31
NSMCE1-202ENST00000561960 TOMM7Q9P0U1 55 aa6.85□□□□□ -1.31
NSMCE1-202ENST00000561960 V9GYV3 84 aa6.85□□□□□ -1.31
NSMCE1-202ENST00000561960 TGIF2-C20orf24A0A0A6YYL0 155 aa6.84□□□□□ -1.31
NSMCE1-202ENST00000561960 NDUFC2-KCTD14E9PQ53 114 aa6.84□□□□□ -1.31
NSMCE1-202ENST00000561960 TNFRSF6BO95407 300 aa6.84□□□□□ -1.31
NSMCE1-202ENST00000561960 CKS2P33552 79 aa6.84□□□□□ -1.31
NSMCE1-202ENST00000561960 SMAGPQ0VAQ4 97 aa6.84□□□□□ -1.31
NSMCE1-202ENST00000561960 TMEM241Q24JQ0 296 aa6.84□□□□□ -1.31
NSMCE1-202ENST00000561960 TMEM18Q96B42 140 aa6.84□□□□□ -1.31
NSMCE1-202ENST00000561960 TIMM21Q9BVV7 248 aa6.84□□□□□ -1.31
NSMCE1-202ENST00000561960 C22orf24Q9Y442 160 aa6.84□□□□□ -1.31
NSMCE1-202ENST00000561960 GAGE10A6NGK3 116 aa6.83□□□□□ -1.32
NSMCE1-202ENST00000561960 RPL37AP8A6NKH3 93 aa6.83□□□□□ -1.32
NSMCE1-202ENST00000561960 D6R8Y8 96 aa6.83□□□□□ -1.32
NSMCE1-202ENST00000561960 TMEM250H0YL14 139 aa6.83□□□□□ -1.32
NSMCE1-202ENST00000561960 NPYP01303 97 aa6.83□□□□□ -1.32
NSMCE1-202ENST00000561960 FAM104BQ5XKR9 115 aa6.83□□□□□ -1.32
NSMCE1-202ENST00000561960 PACRGQ96M98 296 aaPredicted RBP6.83□□□□□ -1.32
NSMCE1-202ENST00000561960 SMIM2Q9BVW6 85 aa6.83□□□□□ -1.32
NSMCE1-202ENST00000561960 EIF5A2Q9GZV4 153 aaKnown RBP6.83□□□□□ -1.32
NSMCE1-202ENST00000561960 ZNF727A8MUV8 499 aa6.82□□□□□ -1.32
NSMCE1-202ENST00000561960 TAGLN2P37802 199 aaKnown RBP6.82□□□□□ -1.32
NSMCE1-202ENST00000561960 KRTAP13-2Q52LG2 175 aa6.82□□□□□ -1.32
NSMCE1-202ENST00000561960 MRPL54Q6P161 138 aaKnown RBP6.82□□□□□ -1.32
NSMCE1-202ENST00000561960 OSTCQ9NRP0 149 aa6.82□□□□□ -1.32
NSMCE1-202ENST00000561960 SPANXA1Q9NS26 97 aa6.82□□□□□ -1.32
NSMCE1-202ENST00000561960 CARHSP1Q9Y2V2 147 aaKnown RBP6.82□□□□□ -1.32
NSMCE1-202ENST00000561960 IGLV4-3A0A075B6K6 122 aa6.81□□□□□ -1.32
NSMCE1-202ENST00000561960 TRBV30A0A0K0K1B3 111 aa6.81□□□□□ -1.32
NSMCE1-202ENST00000561960 PPP1R2P9O14990 202 aa6.81□□□□□ -1.32
NSMCE1-202ENST00000561960 SCO1O75880 301 aa6.81□□□□□ -1.32
NSMCE1-202ENST00000561960 CDIP1Q9H305 208 aa6.81□□□□□ -1.32
NSMCE1-202ENST00000561960 CTAG1AP78358 180 aa6.8□□□□□ -1.32
NSMCE1-202ENST00000561960 ADIRFQ15847 76 aa6.8□□□□□ -1.32
NSMCE1-202ENST00000561960 LOC389332A0A1B0GUA5 103 aa6.79□□□□□ -1.32
NSMCE1-202ENST00000561960 F8WDY8 70 aa6.79□□□□□ -1.32
NSMCE1-202ENST00000561960 PPP1R17O96001 155 aa6.79□□□□□ -1.32
NSMCE1-202ENST00000561960 CRYGAP11844 174 aa6.79□□□□□ -1.32
NSMCE1-202ENST00000561960 MRPS36P82909 103 aaKnown RBP6.79□□□□□ -1.32
NSMCE1-202ENST00000561960 C20orf78Q9BR46 151 aa6.79□□□□□ -1.32
NSMCE1-202ENST00000561960 NAT8BQ9UHF3 227 aa6.79□□□□□ -1.32
NSMCE1-202ENST00000561960 FSIP2Q5CZC0 6907 aa6.78□□□□□ -1.32
NSMCE1-202ENST00000561960 PRSS2P07478 247 aa6.78□□□□□ -1.32
NSMCE1-202ENST00000561960 SRP19P09132 144 aaKnown RBP6.78□□□□□ -1.32
NSMCE1-202ENST00000561960 CKS1BP61024 79 aa6.78□□□□□ -1.32
NSMCE1-202ENST00000561960 NUPR1O60356 82 aa6.77□□□□□ -1.33
NSMCE1-202ENST00000561960 BCE1O60756 84 aa6.77□□□□□ -1.33
NSMCE1-202ENST00000561960 IFI27P40305 119 aaPredicted RBP6.77□□□□□ -1.33
NSMCE1-202ENST00000561960 RPL28P46779 137 aaKnown RBP6.77□□□□□ -1.33
NSMCE1-202ENST00000561960 RPL23P62829 140 aaKnown RBP6.77□□□□□ -1.33
NSMCE1-202ENST00000561960 FAM74A3Q4VXF1 159 aa6.77□□□□□ -1.33
NSMCE1-202ENST00000561960 MRPL55Q7Z7F7 128 aaKnown RBP6.77□□□□□ -1.33
NSMCE1-202ENST00000561960 IGLV7-46A0A075B6I9 117 aa6.76□□□□□ -1.33
NSMCE1-202ENST00000561960 TRBV24-1A0A075B6N3 115 aa6.76□□□□□ -1.33
NSMCE1-202ENST00000561960 BLOC1S1P78537 153 aa6.76□□□□□ -1.33
NSMCE1-202ENST00000561960 C6orf226Q5I0X4 101 aa6.76□□□□□ -1.33
NSMCE1-202ENST00000561960 LINC00173Q6ZV60 143 aa6.76□□□□□ -1.33
NSMCE1-202ENST00000561960 LINC00304Q8N9R0 145 aa6.76□□□□□ -1.33
NSMCE1-202ENST00000561960 TMEM141Q96I45 108 aa6.76□□□□□ -1.33
NSMCE1-202ENST00000561960 LINC00167Q96N53 147 aa6.76□□□□□ -1.33
NSMCE1-202ENST00000561960 SMIM27A0A1W2PRY6 76 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms