RNA–Protein interactions for RNA: ENST00000561823.1

MAP1LC3B-202, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-202ENST00000561823 PRR3P79522 188 aaKnown RBP10.84□□□□□ -0.67
MAP1LC3B-202ENST00000561823 PRELID3AQ96N28 172 aa10.84□□□□□ -0.67
MAP1LC3B-202ENST00000561823 CAMK2N2Q96S95 79 aa10.84□□□□□ -0.67
MAP1LC3B-202ENST00000561823 MT-ND4LP03901 98 aa10.83□□□□□ -0.68
MAP1LC3B-202ENST00000561823 RAB5AP20339 215 aa10.83□□□□□ -0.68
MAP1LC3B-202ENST00000561823 COMMD7Q86VX2 200 aa10.83□□□□□ -0.68
MAP1LC3B-202ENST00000561823 ANAPC16Q96DE5 110 aa10.83□□□□□ -0.68
MAP1LC3B-202ENST00000561823 IGHV3OR16-9A0A0B4J2B5 98 aa10.82□□□□□ -0.68
MAP1LC3B-202ENST00000561823 GAGE2BQ13066 116 aa10.82□□□□□ -0.68
MAP1LC3B-202ENST00000561823 PRSS47A8MTI9 375 aa10.81□□□□□ -0.68
MAP1LC3B-202ENST00000561823 SPAG11BQ08648 103 aa10.81□□□□□ -0.68
MAP1LC3B-202ENST00000561823 OR10D4PQ8NGN7 298 aa10.81□□□□□ -0.68
MAP1LC3B-202ENST00000561823 LAMTOR2Q9Y2Q5 125 aa10.81□□□□□ -0.68
MAP1LC3B-202ENST00000561823 IFITM10A6NMD0 228 aa10.8□□□□□ -0.68
MAP1LC3B-202ENST00000561823 PYGO1Q9Y3Y4 419 aa10.8□□□□□ -0.68
MAP1LC3B-202ENST00000561823 TMEM218A2RU14 115 aa10.79□□□□□ -0.68
MAP1LC3B-202ENST00000561823 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.79□□□□□ -0.68
MAP1LC3B-202ENST00000561823 IFI27P40305 119 aaPredicted RBP10.79□□□□□ -0.68
MAP1LC3B-202ENST00000561823 RNF151Q2KHN1 245 aa10.79□□□□□ -0.68
MAP1LC3B-202ENST00000561823 LOC389332A0A1B0GUA5 103 aa10.78□□□□□ -0.68
MAP1LC3B-202ENST00000561823 A0A1W2PNN7 141 aa10.78□□□□□ -0.68
MAP1LC3B-202ENST00000561823 F8WDY8 70 aa10.78□□□□□ -0.68
MAP1LC3B-202ENST00000561823 ORAOV1Q8WV07 137 aa10.78□□□□□ -0.68
MAP1LC3B-202ENST00000561823 SEC11CQ9BY50 192 aa10.78□□□□□ -0.68
MAP1LC3B-202ENST00000561823 MAP1LC3AQ9H492 121 aa10.78□□□□□ -0.68
MAP1LC3B-202ENST00000561823 IGLV4-3A0A075B6K6 122 aa10.77□□□□□ -0.69
MAP1LC3B-202ENST00000561823 MRPL35Q9NZE8 188 aaKnown RBP10.77□□□□□ -0.69
MAP1LC3B-202ENST00000561823 HMCN2Q8NDA2 5059 aa10.77□□□□□ -0.69
MAP1LC3B-202ENST00000561823 A0A0J9YXV3 536 aa10.76□□□□□ -0.69
MAP1LC3B-202ENST00000561823 Q6ZRP5 223 aa10.76□□□□□ -0.69
MAP1LC3B-202ENST00000561823 Q8N8P6 123 aa10.76□□□□□ -0.69
MAP1LC3B-202ENST00000561823 PLA2G2DQ9UNK4 145 aa10.76□□□□□ -0.69
MAP1LC3B-202ENST00000561823 TGIF2-C20orf24A0A0A6YYL0 155 aa10.75□□□□□ -0.69
MAP1LC3B-202ENST00000561823 RPL18AQ02543 176 aaKnown RBP10.75□□□□□ -0.69
MAP1LC3B-202ENST00000561823 TMEM141Q96I45 108 aa10.75□□□□□ -0.69
MAP1LC3B-202ENST00000561823 A0A087WZ39 114 aa10.74□□□□□ -0.69
MAP1LC3B-202ENST00000561823 C9orf116Q5BN46 136 aaPredicted RBP10.74□□□□□ -0.69
MAP1LC3B-202ENST00000561823 LINC00242Q5T6M2 205 aa10.74□□□□□ -0.69
MAP1LC3B-202ENST00000561823 SPINK6Q6UWN8 80 aa10.74□□□□□ -0.69
MAP1LC3B-202ENST00000561823 LINC01600Q96MT4 127 aa10.74□□□□□ -0.69
MAP1LC3B-202ENST00000561823 CYSLTR1Q9Y271 337 aa10.74□□□□□ -0.69
MAP1LC3B-202ENST00000561823 NDUFA1O15239 70 aa10.73□□□□□ -0.69
MAP1LC3B-202ENST00000561823 SRSF9Q13242 221 aaKnown RBP eCLIP10.73□□□□□ -0.69
MAP1LC3B-202ENST00000561823 NDUFA5Q16718 116 aa10.73□□□□□ -0.69
MAP1LC3B-202ENST00000561823 C10orf25Q5T742 122 aa10.73□□□□□ -0.69
MAP1LC3B-202ENST00000561823 IMMP2LQ96T52 175 aa10.73□□□□□ -0.69
MAP1LC3B-202ENST00000561823 CTDSP1Q9GZU7 261 aa10.73□□□□□ -0.69
MAP1LC3B-202ENST00000561823 KIAA0087Q14695 138 aa10.72□□□□□ -0.69
MAP1LC3B-202ENST00000561823 C2orf66Q6UXQ4 117 aa10.72□□□□□ -0.69
MAP1LC3B-202ENST00000561823 UNQ6190/PRO20217Q6UXQ8 127 aa10.72□□□□□ -0.69
MAP1LC3B-202ENST00000561823 TEX43Q6ZNM6 134 aa10.72□□□□□ -0.69
MAP1LC3B-202ENST00000561823 K7EMI3 77 aa10.71□□□□□ -0.69
MAP1LC3B-202ENST00000561823 TLX1NBP0CAT3 122 aa10.71□□□□□ -0.69
MAP1LC3B-202ENST00000561823 UBE2D1P51668 147 aa10.71□□□□□ -0.69
MAP1LC3B-202ENST00000561823 ORMDL2Q53FV1 153 aa10.71□□□□□ -0.69
MAP1LC3B-202ENST00000561823 NPSP0C0P6 89 aa10.7□□□□□ -0.7
MAP1LC3B-202ENST00000561823 ADCYAP1P18509 176 aa10.7□□□□□ -0.7
MAP1LC3B-202ENST00000561823 S100PP25815 95 aa10.7□□□□□ -0.7
MAP1LC3B-202ENST00000561823 Q6ZN92 141 aa10.7□□□□□ -0.7
MAP1LC3B-202ENST00000561823 AMELXQ99217 191 aa10.7□□□□□ -0.7
MAP1LC3B-202ENST00000561823 C2orf88Q9BSF0 95 aa10.7□□□□□ -0.7
MAP1LC3B-202ENST00000561823 NXT2Q9NPJ8 142 aaKnown RBP10.7□□□□□ -0.7
MAP1LC3B-202ENST00000561823 C6orf48Q9UBA6 75 aa10.7□□□□□ -0.7
MAP1LC3B-202ENST00000561823 IGIPA6NJ69 53 aa10.69□□□□□ -0.7
MAP1LC3B-202ENST00000561823 ZC2HC1BQ5TFG8 222 aa10.69□□□□□ -0.7
MAP1LC3B-202ENST00000561823 REG3GQ6UW15 175 aa10.69□□□□□ -0.7
MAP1LC3B-202ENST00000561823 LINC00173Q6ZV60 143 aa10.69□□□□□ -0.7
MAP1LC3B-202ENST00000561823 LINC01561Q8N1V8 128 aa10.69□□□□□ -0.7
MAP1LC3B-202ENST00000561823 VCX2Q9H322 139 aa10.69□□□□□ -0.7
MAP1LC3B-202ENST00000561823 RHEBQ15382 184 aa10.68□□□□□ -0.7
MAP1LC3B-202ENST00000561823 PHF5AQ7RTV0 110 aaKnown RBP10.68□□□□□ -0.7
MAP1LC3B-202ENST00000561823 PSORS1C2Q9UIG4 136 aa10.68□□□□□ -0.7
MAP1LC3B-202ENST00000561823 CARHSP1Q9Y2V2 147 aaKnown RBP10.68□□□□□ -0.7
MAP1LC3B-202ENST00000561823 TNXBP22105 4242 aa10.68□□□□□ -0.7
MAP1LC3B-202ENST00000561823 TRAV9-1A0A075B6T8 112 aa10.67□□□□□ -0.7
MAP1LC3B-202ENST00000561823 MT-ND6P03923 174 aa10.66□□□□□ -0.7
MAP1LC3B-202ENST00000561823 C10orf91Q5T1B1 145 aa10.66□□□□□ -0.7
MAP1LC3B-202ENST00000561823 FAM19A3Q7Z5A8 133 aa10.66□□□□□ -0.7
MAP1LC3B-202ENST00000561823 TRBV30A0A0K0K1B3 111 aa10.65□□□□□ -0.7
MAP1LC3B-202ENST00000561823 FAM168BA1KXE4 195 aa10.65□□□□□ -0.7
MAP1LC3B-202ENST00000561823 G0S2P27469 103 aa10.65□□□□□ -0.7
MAP1LC3B-202ENST00000561823 KRTAP10-8P60410 259 aa10.65□□□□□ -0.7
MAP1LC3B-202ENST00000561823 KIAA1644Q3SXP7 199 aa10.65□□□□□ -0.7
MAP1LC3B-202ENST00000561823 SNAPINO95295 136 aa10.64□□□□□ -0.71
MAP1LC3B-202ENST00000561823 GAGE2EQ4V326 116 aa10.64□□□□□ -0.71
MAP1LC3B-202ENST00000561823 C2orf82Q6UX34 121 aa10.64□□□□□ -0.71
MAP1LC3B-202ENST00000561823 SVBPQ8N300 66 aa10.64□□□□□ -0.71
MAP1LC3B-202ENST00000561823 RPS10P5Q9NQ39 176 aa10.64□□□□□ -0.71
MAP1LC3B-202ENST00000561823 GAGE2DQ9UEU5 116 aa10.64□□□□□ -0.71
MAP1LC3B-202ENST00000561823 APOC3P02656 99 aa10.63□□□□□ -0.71
MAP1LC3B-202ENST00000561823 C1orf137Q5JT78 98 aa10.63□□□□□ -0.71
MAP1LC3B-202ENST00000561823 PAPPA-AS1Q5QFB9 102 aa10.63□□□□□ -0.71
MAP1LC3B-202ENST00000561823 TOMM6Q96B49 74 aa10.63□□□□□ -0.71
MAP1LC3B-202ENST00000561823 PACRGQ96M98 296 aaPredicted RBP10.63□□□□□ -0.71
MAP1LC3B-202ENST00000561823 TIMM17AQ99595 171 aa10.63□□□□□ -0.71
MAP1LC3B-202ENST00000561823 NDUFC2-KCTD14E9PQ53 114 aa10.62□□□□□ -0.71
MAP1LC3B-202ENST00000561823 GNB1LQ9BYB4 327 aa10.62□□□□□ -0.71
MAP1LC3B-202ENST00000561823 HERVK_113P63121 156 aa10.61□□□□□ -0.71
MAP1LC3B-202ENST00000561823 SEC11AP67812 179 aa10.61□□□□□ -0.71
MAP1LC3B-202ENST00000561823 COX19Q49B96 90 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms