RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 TCAPO15273 167 aa6.45□□□□□ -1.38
CLK3-205ENST00000561673 S100A8P05109 93 aa6.45□□□□□ -1.38
CLK3-205ENST00000561673 MT1HL1P0DM35 61 aa6.45□□□□□ -1.38
CLK3-205ENST00000561673 MALP21145 153 aa6.45□□□□□ -1.38
CLK3-205ENST00000561673 FAM104AQ969W3 186 aa6.45□□□□□ -1.38
CLK3-205ENST00000561673 NPYP01303 97 aa6.44□□□□□ -1.38
CLK3-205ENST00000561673 C5orf38Q86SI9 138 aa6.44□□□□□ -1.38
CLK3-205ENST00000561673 SMIM2Q9BVW6 85 aa6.44□□□□□ -1.38
CLK3-205ENST00000561673 PPBPP02775 128 aa6.43□□□□□ -1.38
CLK3-205ENST00000561673 PRR3P79522 188 aaKnown RBP6.43□□□□□ -1.38
CLK3-205ENST00000561673 ATP5L2Q7Z4Y8 100 aa6.43□□□□□ -1.38
CLK3-205ENST00000561673 OPRPNQ99935 248 aaPredicted RBP6.43□□□□□ -1.38
CLK3-205ENST00000561673 PKIGQ9Y2B9 76 aa6.43□□□□□ -1.38
CLK3-205ENST00000561673 LOC107984640A0A0U1RRK4 108 aa6.42□□□□□ -1.38
CLK3-205ENST00000561673 PTTG1IPP53801 180 aa6.42□□□□□ -1.38
CLK3-205ENST00000561673 GAGE2BQ13066 116 aa6.42□□□□□ -1.38
CLK3-205ENST00000561673 TMEM136Q6ZRR5 245 aa6.42□□□□□ -1.38
CLK3-205ENST00000561673 ORMDL3Q8N138 153 aa6.42□□□□□ -1.38
CLK3-205ENST00000561673 CAMK2N2Q96S95 79 aa6.42□□□□□ -1.38
CLK3-205ENST00000561673 SPANXA1Q9NS26 97 aa6.42□□□□□ -1.38
CLK3-205ENST00000561673 APOMO95445 188 aa6.41□□□□□ -1.38
CLK3-205ENST00000561673 MRPS36P82909 103 aaKnown RBP6.41□□□□□ -1.38
CLK3-205ENST00000561673 C2orf48Q96LS8 159 aa6.41□□□□□ -1.38
CLK3-205ENST00000561673 PRELID3AQ96N28 172 aa6.41□□□□□ -1.38
CLK3-205ENST00000561673 IGHV3OR16-9A0A0B4J2B5 98 aa6.4□□□□□ -1.38
CLK3-205ENST00000561673 LOC100996750A0A140TA64 210 aa6.4□□□□□ -1.38
CLK3-205ENST00000561673 A0A1W2PNN7 141 aa6.4□□□□□ -1.38
CLK3-205ENST00000561673 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.4□□□□□ -1.38
CLK3-205ENST00000561673 RAB5AP20339 215 aa6.4□□□□□ -1.38
CLK3-205ENST00000561673 SPAG11BQ08648 103 aa6.4□□□□□ -1.38
CLK3-205ENST00000561673 KRTAP4-6Q9BYQ5 205 aa6.4□□□□□ -1.38
CLK3-205ENST00000561673 A0A0J9YXV3 536 aa6.39□□□□□ -1.39
CLK3-205ENST00000561673 LOC389332A0A1B0GUA5 103 aa6.39□□□□□ -1.39
CLK3-205ENST00000561673 IFITM10A6NMD0 228 aa6.39□□□□□ -1.39
CLK3-205ENST00000561673 PRSS47A8MTI9 375 aa6.39□□□□□ -1.39
CLK3-205ENST00000561673 MT-ND4LP03901 98 aa6.39□□□□□ -1.39
CLK3-205ENST00000561673 RAB14P61106 215 aa6.39□□□□□ -1.39
CLK3-205ENST00000561673 PNRC1Q12796 327 aaPredicted RBP6.39□□□□□ -1.39
CLK3-205ENST00000561673 OR10D4PQ8NGN7 298 aa6.39□□□□□ -1.39
CLK3-205ENST00000561673 RNF151Q2KHN1 245 aa6.38□□□□□ -1.39
CLK3-205ENST00000561673 Q6ZRP5 223 aa6.38□□□□□ -1.39
CLK3-205ENST00000561673 ORAOV1Q8WV07 137 aa6.38□□□□□ -1.39
CLK3-205ENST00000561673 LINC01600Q96MT4 127 aa6.38□□□□□ -1.39
CLK3-205ENST00000561673 PYGO1Q9Y3Y4 419 aa6.38□□□□□ -1.39
CLK3-205ENST00000561673 IGLV4-3A0A075B6K6 122 aa6.37□□□□□ -1.39
CLK3-205ENST00000561673 IFI27P40305 119 aaPredicted RBP6.37□□□□□ -1.39
CLK3-205ENST00000561673 RPL18AQ02543 176 aaKnown RBP6.37□□□□□ -1.39
CLK3-205ENST00000561673 SRSF9Q13242 221 aaKnown RBP eCLIP6.37□□□□□ -1.39
CLK3-205ENST00000561673 C9orf116Q5BN46 136 aaPredicted RBP6.37□□□□□ -1.39
CLK3-205ENST00000561673 C10orf25Q5T742 122 aa6.37□□□□□ -1.39
CLK3-205ENST00000561673 SPINK6Q6UWN8 80 aa6.37□□□□□ -1.39
CLK3-205ENST00000561673 MAP1LC3AQ9H492 121 aa6.37□□□□□ -1.39
CLK3-205ENST00000561673 LAMTOR2Q9Y2Q5 125 aa6.37□□□□□ -1.39
CLK3-205ENST00000561673 F8WDY8 70 aa6.36□□□□□ -1.39
CLK3-205ENST00000561673 LINC00242Q5T6M2 205 aa6.36□□□□□ -1.39
CLK3-205ENST00000561673 UNQ6190/PRO20217Q6UXQ8 127 aa6.36□□□□□ -1.39
CLK3-205ENST00000561673 Q8N8P6 123 aa6.36□□□□□ -1.39
CLK3-205ENST00000561673 TMEM141Q96I45 108 aa6.36□□□□□ -1.39
CLK3-205ENST00000561673 MRPL35Q9NZE8 188 aaKnown RBP6.36□□□□□ -1.39
CLK3-205ENST00000561673 A0A087WZ39 114 aa6.35□□□□□ -1.39
CLK3-205ENST00000561673 TGIF2-C20orf24A0A0A6YYL0 155 aa6.35□□□□□ -1.39
CLK3-205ENST00000561673 NDUFA1O15239 70 aa6.35□□□□□ -1.39
CLK3-205ENST00000561673 KIAA0087Q14695 138 aa6.35□□□□□ -1.39
CLK3-205ENST00000561673 IMMP2LQ96T52 175 aa6.35□□□□□ -1.39
CLK3-205ENST00000561673 UBE2D1P51668 147 aa6.34□□□□□ -1.39
CLK3-205ENST00000561673 CLLU1Q5K131 121 aa6.34□□□□□ -1.39
CLK3-205ENST00000561673 ZC2HC1BQ5TFG8 222 aa6.34□□□□□ -1.39
CLK3-205ENST00000561673 C2orf66Q6UXQ4 117 aa6.34□□□□□ -1.39
CLK3-205ENST00000561673 TEX43Q6ZNM6 134 aa6.34□□□□□ -1.39
CLK3-205ENST00000561673 PHF5AQ7RTV0 110 aaKnown RBP6.34□□□□□ -1.39
CLK3-205ENST00000561673 C6orf48Q9UBA6 75 aa6.34□□□□□ -1.39
CLK3-205ENST00000561673 PSORS1C2Q9UIG4 136 aa6.34□□□□□ -1.39
CLK3-205ENST00000561673 CYSLTR1Q9Y271 337 aa6.34□□□□□ -1.39
CLK3-205ENST00000561673 FAM168BA1KXE4 195 aa6.33□□□□□ -1.4
CLK3-205ENST00000561673 TLX1NBP0CAT3 122 aa6.33□□□□□ -1.4
CLK3-205ENST00000561673 KRTAP10-8P60410 259 aa6.33□□□□□ -1.4
CLK3-205ENST00000561673 ORMDL2Q53FV1 153 aa6.33□□□□□ -1.4
CLK3-205ENST00000561673 REG3GQ6UW15 175 aa6.33□□□□□ -1.4
CLK3-205ENST00000561673 AMELXQ99217 191 aa6.33□□□□□ -1.4
CLK3-205ENST00000561673 LRP2P98164 4655 aa6.33□□□□□ -1.4
CLK3-205ENST00000561673 IGIPA6NJ69 53 aa6.32□□□□□ -1.4
CLK3-205ENST00000561673 MT-ND6P03923 174 aa6.32□□□□□ -1.4
CLK3-205ENST00000561673 ADCYAP1P18509 176 aa6.32□□□□□ -1.4
CLK3-205ENST00000561673 C2orf82Q6UX34 121 aa6.32□□□□□ -1.4
CLK3-205ENST00000561673 Q6ZN92 141 aa6.32□□□□□ -1.4
CLK3-205ENST00000561673 LINC00173Q6ZV60 143 aa6.32□□□□□ -1.4
CLK3-205ENST00000561673 C2orf88Q9BSF0 95 aa6.32□□□□□ -1.4
CLK3-205ENST00000561673 CTDSP1Q9GZU7 261 aa6.32□□□□□ -1.4
CLK3-205ENST00000561673 VCX2Q9H322 139 aa6.32□□□□□ -1.4
CLK3-205ENST00000561673 TMEM218A2RU14 115 aa6.31□□□□□ -1.4
CLK3-205ENST00000561673 K7EMI3 77 aa6.31□□□□□ -1.4
CLK3-205ENST00000561673 NPSP0C0P6 89 aa6.31□□□□□ -1.4
CLK3-205ENST00000561673 IFITM2Q01629 132 aa6.31□□□□□ -1.4
CLK3-205ENST00000561673 KIAA1644Q3SXP7 199 aa6.31□□□□□ -1.4
CLK3-205ENST00000561673 GAGE2EQ4V326 116 aa6.31□□□□□ -1.4
CLK3-205ENST00000561673 C1orf137Q5JT78 98 aa6.31□□□□□ -1.4
CLK3-205ENST00000561673 LINC01561Q8N1V8 128 aa6.31□□□□□ -1.4
CLK3-205ENST00000561673 NXT2Q9NPJ8 142 aaKnown RBP6.31□□□□□ -1.4
CLK3-205ENST00000561673 GAGE2DQ9UEU5 116 aa6.31□□□□□ -1.4
CLK3-205ENST00000561673 TRBV30A0A0K0K1B3 111 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms