RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 TRAV12-1A0A0B4J245 112 aa2.2□□□□□ -2.06
SPG11-225ENST00000561391 TRBV6-5A0A0K0K1A5 114 aa2.2□□□□□ -2.06
SPG11-225ENST00000561391 A8MWV9 139 aa2.2□□□□□ -2.06
SPG11-225ENST00000561391 H3BVH4 76 aa2.2□□□□□ -2.06
SPG11-225ENST00000561391 ZNF688P0C7X2 276 aa2.2□□□□□ -2.06
SPG11-225ENST00000561391 PLNP26678 52 aa2.2□□□□□ -2.06
SPG11-225ENST00000561391 DEFB114Q30KQ6 69 aa2.2□□□□□ -2.06
SPG11-225ENST00000561391 OR11H2Q8NH07 326 aa2.2□□□□□ -2.06
SPG11-225ENST00000561391 RNASE8Q8TDE3 154 aaKnown RBP2.2□□□□□ -2.06
SPG11-225ENST00000561391 RASL10AQ92737 203 aa2.2□□□□□ -2.06
SPG11-225ENST00000561391 TMEM141Q96I45 108 aa2.2□□□□□ -2.06
SPG11-225ENST00000561391 KIR2DL4Q99706 377 aa2.2□□□□□ -2.06
SPG11-225ENST00000561391 SPXQ9BT56 116 aa2.2□□□□□ -2.06
SPG11-225ENST00000561391 JPT2Q9H910 190 aa2.2□□□□□ -2.06
SPG11-225ENST00000561391 TRAV12-3A0A0B4J271 114 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 IGHV3-16A0A0C4DH30 117 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 A0A0U1RQV1 116 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 NBDYA0A0U1RRE5 68 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 RPL37AP8A6NKH3 93 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 A8MTW9 85 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 H3BMM0 161 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 M0R2P5 195 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 GNRH2O43555 120 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 DPM2O94777 84 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 NPYP01303 97 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 COX8AP10176 69 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 RNASE3P12724 160 aaKnown RBP2.19□□□□□ -2.06
SPG11-225ENST00000561391 HLA-DRB4P13762 266 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 TFPI2P48307 235 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 CRYBA4P53673 196 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 SEC11AP67812 179 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 SMAGPQ0VAQ4 97 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 RHOHQ15669 191 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 TMEM97Q5BJF2 176 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 MUC21Q5SSG8 566 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 LCE1FQ5T754 118 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 ERASQ7Z444 233 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 STHQ8IWL8 128 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 Q8N377 158 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 C14orf178Q8N769 122 aaPredicted RBP2.19□□□□□ -2.06
SPG11-225ENST00000561391 TOMM6Q96B49 74 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 DNAJC30Q96LL9 226 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 C9orf85Q96MD7 179 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 SCGB3A1Q96QR1 104 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 SMIM2Q9BVW6 85 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 CYSLTR1Q9Y271 337 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 TIMM8BQ9Y5J9 83 aaPredicted RBP2.19□□□□□ -2.06
SPG11-225ENST00000561391 HLA-DRB4X5D2U9 266 aa2.19□□□□□ -2.06
SPG11-225ENST00000561391 DSCAML1Q8TD84 2053 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 A0A087WX48 190 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 MUC21A0A0G2JKD1 596 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 TRBV27A0A0K0K1C4 114 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 MUC21A0A140T8X8 626 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 TEX48A0A1B0GUV7 120 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 A6NDN8 102 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 F6UB75 175 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 I3L3M4 83 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 NCR2O95944 276 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 INSP01308 110 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 IGKCP01834 107 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 MGPP08493 103 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 POLR2KP53803 58 aaKnown RBP2.18□□□□□ -2.06
SPG11-225ENST00000561391 DEFB131AP59861 70 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 HERVK_113P61574 105 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 PRR9Q5T870 116 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 MORN3Q6PF18 240 aaPredicted RBP2.18□□□□□ -2.06
SPG11-225ENST00000561391 CD164L2Q6UWJ8 174 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 AMTNQ6UX39 209 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 ZFP2Q6ZN57 461 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 ORAOV1Q8WV07 137 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 LINC01587Q99440 93 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 TIMM17AQ99595 171 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 SNHG12Q9BXW3 62 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 C11orf68Q9H3H3 251 aaKnown RBP2.18□□□□□ -2.06
SPG11-225ENST00000561391 HIGD1BQ9P298 99 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 KIF25-AS1Q9Y6Z4 181 aa2.18□□□□□ -2.06
SPG11-225ENST00000561391 A0A096LNJ9 63 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 SDHAF1A6NFY7 115 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 F8VRH5 84 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 H0Y8G0 127 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 SMKR1H3BMG3 65 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 M0QY20 66 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 CRYGDP07320 174 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 LINC00315P59091 139 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 HERV-K104P63124 156 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 PMVKQ15126 192 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 TAL2Q16559 108 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 SPINK13Q1W4C9 94 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 C2orf66Q6UXQ4 117 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 TMEM61Q8N0U2 210 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 ATOH7Q8N100 152 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 TMEM208Q9BTX3 173 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 OCR1Q9BZK8 76 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 HHLA3Q9XRX5 114 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 CHTOPQ9Y3Y2 248 aaKnown RBP2.17□□□□□ -2.06
SPG11-225ENST00000561391 NACAE9PAV3 2078 aa2.17□□□□□ -2.06
SPG11-225ENST00000561391 TNXBP22105 4242 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 TRAV12-2A0A075B6T6 113 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 TRAV26-2A0A0B4J265 109 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 TRBV10-1A0A0K0K1A3 114 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms