RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 A0A087WZ39 114 aa11.27□□□□□ -0.61
PBX1-219ENST00000560641 PFN2P35080 140 aa11.26□□□□□ -0.61
PBX1-219ENST00000560641 IGHV4-61A0A0C4DH41 118 aa11.26□□□□□ -0.61
PBX1-219ENST00000560641 LINC00158P58513 81 aa11.26□□□□□ -0.61
PBX1-219ENST00000560641 Q8N814 137 aa11.26□□□□□ -0.61
PBX1-219ENST00000560641 C10orf105Q8TEF2 133 aa11.26□□□□□ -0.61
PBX1-219ENST00000560641 MAP6D1Q9H9H5 199 aa11.25□□□□□ -0.61
PBX1-219ENST00000560641 BDP1A6H8Y1 2624 aa11.25□□□□□ -0.61
PBX1-219ENST00000560641 LOC110117498A0A087WWA1 95 aa11.24□□□□□ -0.61
PBX1-219ENST00000560641 C10orf99Q6UWK7 81 aa11.24□□□□□ -0.61
PBX1-219ENST00000560641 UBL5Q9BZL1 73 aa11.24□□□□□ -0.61
PBX1-219ENST00000560641 LINC00482Q8N8I6 264 aa11.23□□□□□ -0.61
PBX1-219ENST00000560641 NANOS2P60321 138 aaKnown RBP11.23□□□□□ -0.61
PBX1-219ENST00000560641 FAM19A1Q7Z5A9 133 aa11.23□□□□□ -0.61
PBX1-219ENST00000560641 C16orf95Q9H693 158 aa11.23□□□□□ -0.61
PBX1-219ENST00000560641 CACNA1HO95180 2353 aa11.23□□□□□ -0.61
PBX1-219ENST00000560641 RELNP78509 3460 aa11.23□□□□□ -0.61
PBX1-219ENST00000560641 TRAV23DV6A0A075B6W5 121 aa11.22□□□□□ -0.61
PBX1-219ENST00000560641 C11orf44Q8N8P7 122 aa11.22□□□□□ -0.61
PBX1-219ENST00000560641 UBE2L6O14933 153 aa11.22□□□□□ -0.61
PBX1-219ENST00000560641 ENHOQ6UWT2 76 aa11.22□□□□□ -0.61
PBX1-219ENST00000560641 MAP1BP46821 2468 aaKnown RBP11.22□□□□□ -0.61
PBX1-219ENST00000560641 SLPIP03973 132 aa11.22□□□□□ -0.61
PBX1-219ENST00000560641 MSMBP08118 114 aa11.21□□□□□ -0.61
PBX1-219ENST00000560641 C20orf197Q8N268 126 aa11.21□□□□□ -0.61
PBX1-219ENST00000560641 A0A096LNT2 108 aa11.21□□□□□ -0.62
PBX1-219ENST00000560641 ATP5EP56381 51 aaPredicted RBP11.2□□□□□ -0.62
PBX1-219ENST00000560641 ACACAQ13085 2346 aa11.2□□□□□ -0.62
PBX1-219ENST00000560641 NDUFC1O43677 76 aa11.2□□□□□ -0.62
PBX1-219ENST00000560641 SMIM26A0A096LP01 95 aa11.19□□□□□ -0.62
PBX1-219ENST00000560641 Q6ZQT0 140 aa11.19□□□□□ -0.62
PBX1-219ENST00000560641 PAX4O43316 350 aa11.19□□□□□ -0.62
PBX1-219ENST00000560641 C1orf158Q8N1D5 194 aa11.19□□□□□ -0.62
PBX1-219ENST00000560641 SPTBN1Q01082 2364 aaKnown RBP11.19□□□□□ -0.62
PBX1-219ENST00000560641 CXCL6P80162 114 aa11.18□□□□□ -0.62
PBX1-219ENST00000560641 TRGV1A0A0A0MS02 117 aa11.17□□□□□ -0.62
PBX1-219ENST00000560641 H3BQ85 93 aa11.17□□□□□ -0.62
PBX1-219ENST00000560641 C6orf223Q8N319 242 aa11.16□□□□□ -0.62
PBX1-219ENST00000560641 ASH1LQ9NR48 2969 aaKnown RBP11.16□□□□□ -0.62
PBX1-219ENST00000560641 IGHV4-59P01825 116 aa11.16□□□□□ -0.62
PBX1-219ENST00000560641 C9orf66Q5T8R8 295 aa11.16□□□□□ -0.62
PBX1-219ENST00000560641 LINC00336Q6ZUF6 198 aa11.16□□□□□ -0.62
PBX1-219ENST00000560641 Q8IZM0 81 aa11.16□□□□□ -0.62
PBX1-219ENST00000560641 TMEM86BQ8N661 226 aa11.16□□□□□ -0.62
PBX1-219ENST00000560641 WFDC9Q8NEX5 89 aa11.16□□□□□ -0.62
PBX1-219ENST00000560641 AVPP01185 164 aa11.15□□□□□ -0.62
PBX1-219ENST00000560641 COX17Q14061 63 aa11.15□□□□□ -0.62
PBX1-219ENST00000560641 ZNF702PQ9H963 129 aa11.15□□□□□ -0.62
PBX1-219ENST00000560641 TOMM7Q9P0U1 55 aa11.15□□□□□ -0.62
PBX1-219ENST00000560641 EP300Q09472 2414 aaPredicted RBP11.14□□□□□ -0.63
PBX1-219ENST00000560641 FP248Q71RG6 208 aaPredicted RBP11.14□□□□□ -0.63
PBX1-219ENST00000560641 ZNF561-AS1K7EIQ3 104 aa11.14□□□□□ -0.63
PBX1-219ENST00000560641 PDE6GP18545 87 aa11.14□□□□□ -0.63
PBX1-219ENST00000560641 NBL1P41271 181 aa11.14□□□□□ -0.63
PBX1-219ENST00000560641 Q6ZTI0 123 aa11.13□□□□□ -0.63
PBX1-219ENST00000560641 CELSR1Q9NYQ6 3014 aa11.13□□□□□ -0.63
PBX1-219ENST00000560641 SLURP1P55000 103 aa11.13□□□□□ -0.63
PBX1-219ENST00000560641 LINC01547P58512 204 aaPredicted RBP11.13□□□□□ -0.63
PBX1-219ENST00000560641 DEFB114Q30KQ6 69 aa11.13□□□□□ -0.63
PBX1-219ENST00000560641 DEFB112Q30KQ8 113 aa11.13□□□□□ -0.63
PBX1-219ENST00000560641 ZNF292O60281 2723 aa11.13□□□□□ -0.63
PBX1-219ENST00000560641 B4DSR2 109 aa11.12□□□□□ -0.63
PBX1-219ENST00000560641 ERC2-IT1O76042 136 aa11.12□□□□□ -0.63
PBX1-219ENST00000560641 IGLV4-60A0A075B6I1 120 aa11.11□□□□□ -0.63
PBX1-219ENST00000560641 TRBV6-8A0A0A6YYG3 113 aa11.11□□□□□ -0.63
PBX1-219ENST00000560641 LINC00575Q6W349 94 aa11.11□□□□□ -0.63
PBX1-219ENST00000560641 LINC00959A0A1B0GUT2 108 aa11.1□□□□□ -0.63
PBX1-219ENST00000560641 C4orf3Q8WVX3 66 aa11.1□□□□□ -0.63
PBX1-219ENST00000560641 PLAC8L1A1L4L8 177 aa11.1□□□□□ -0.63
PBX1-219ENST00000560641 RBM3P98179 157 aaKnown RBP11.1□□□□□ -0.63
PBX1-219ENST00000560641 IGHV4-28A0A0C4DH34 117 aa11.09□□□□□ -0.63
PBX1-219ENST00000560641 TRBV7-4A0A0J9YYF1 115 aa11.09□□□□□ -0.63
PBX1-219ENST00000560641 F8WDY8 70 aa11.09□□□□□ -0.63
PBX1-219ENST00000560641 ODF3L2Q3SX64 289 aa11.09□□□□□ -0.63
PBX1-219ENST00000560641 MUC7Q8TAX7 377 aa11.09□□□□□ -0.63
PBX1-219ENST00000560641 IGHV4-30-2A0A087WSY4 118 aa11.09□□□□□ -0.63
PBX1-219ENST00000560641 J3QLI3 93 aa11.08□□□□□ -0.64
PBX1-219ENST00000560641 Q6ZVQ6 151 aa11.08□□□□□ -0.64
PBX1-219ENST00000560641 C16orf74Q96GX8 76 aa11.07□□□□□ -0.64
PBX1-219ENST00000560641 C6orf226Q5I0X4 101 aa11.07□□□□□ -0.64
PBX1-219ENST00000560641 A0A1B0GUV1 79 aa11.07□□□□□ -0.64
PBX1-219ENST00000560641 FSHBP01225 129 aa11.06□□□□□ -0.64
PBX1-219ENST00000560641 TLN1Q9Y490 2541 aaKnown RBP11.06□□□□□ -0.64
PBX1-219ENST00000560641 COL6A6A6NMZ7 2263 aa11.05□□□□□ -0.64
PBX1-219ENST00000560641 TRAV10A0A0B4J240 114 aa11.05□□□□□ -0.64
PBX1-219ENST00000560641 STHQ8IWL8 128 aa11.05□□□□□ -0.64
PBX1-219ENST00000560641 DYNLRB2Q8TF09 96 aa11.05□□□□□ -0.64
PBX1-219ENST00000560641 C19orf84I3L1E1 186 aa11.05□□□□□ -0.64
PBX1-219ENST00000560641 Q6YL49 198 aa11.05□□□□□ -0.64
PBX1-219ENST00000560641 CCL19Q99731 98 aa11.05□□□□□ -0.64
PBX1-219ENST00000560641 F8WEM9 126 aa11.05□□□□□ -0.64
PBX1-219ENST00000560641 TRBV7-6A0A0J9YX20 115 aa11.03□□□□□ -0.64
PBX1-219ENST00000560641 PLA2G2AP14555 144 aa11.03□□□□□ -0.64
PBX1-219ENST00000560641 C18orf65Q6ZTR6 163 aa11.03□□□□□ -0.64
PBX1-219ENST00000560641 VPS13CQ709C8 3753 aa11.03□□□□□ -0.64
PBX1-219ENST00000560641 DSCR9P59020 149 aa11.03□□□□□ -0.64
PBX1-219ENST00000560641 KIAA0087Q14695 138 aa11.03□□□□□ -0.64
PBX1-219ENST00000560641 RMI2Q96E14 147 aa11.03□□□□□ -0.64
PBX1-219ENST00000560641 LOC100131303A0A0U1RQF7 123 aa11.02□□□□□ -0.64
PBX1-219ENST00000560641 NOP10Q9NPE3 64 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms