RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 YPEL4Q96NS1 127 aa6.83□□□□□ -1.32
HERC1-204ENST00000559715 H7C423 109 aa6.82□□□□□ -1.32
HERC1-204ENST00000559715 VCYO14598 125 aa6.82□□□□□ -1.32
HERC1-204ENST00000559715 TCAPO15273 167 aa6.82□□□□□ -1.32
HERC1-204ENST00000559715 TSHBP01222 138 aa6.82□□□□□ -1.32
HERC1-204ENST00000559715 NPYP01303 97 aa6.82□□□□□ -1.32
HERC1-204ENST00000559715 ESDP10768 282 aa6.82□□□□□ -1.32
HERC1-204ENST00000559715 SMIM2Q9BVW6 85 aa6.82□□□□□ -1.32
HERC1-204ENST00000559715 LINC00959A0A1B0GUT2 108 aa6.81□□□□□ -1.32
HERC1-204ENST00000559715 APCSP02743 223 aa6.81□□□□□ -1.32
HERC1-204ENST00000559715 PMCHP20382 165 aa6.81□□□□□ -1.32
HERC1-204ENST00000559715 OR5A1Q8NGJ0 315 aa6.81□□□□□ -1.32
HERC1-204ENST00000559715 PRELID3AQ96N28 172 aa6.81□□□□□ -1.32
HERC1-204ENST00000559715 KIR2DL4Q99706 377 aa6.81□□□□□ -1.32
HERC1-204ENST00000559715 SMCO4Q9NRQ5 59 aa6.81□□□□□ -1.32
HERC1-204ENST00000559715 TGIF2-C20orf24A0A0A6YYL0 155 aa6.8□□□□□ -1.32
HERC1-204ENST00000559715 A0A1W2PNN7 141 aa6.8□□□□□ -1.32
HERC1-204ENST00000559715 CCL25O15444 150 aa6.79□□□□□ -1.32
HERC1-204ENST00000559715 ZNF25P17030 456 aaPredicted RBP6.79□□□□□ -1.32
HERC1-204ENST00000559715 XCL1P47992 114 aa6.79□□□□□ -1.32
HERC1-204ENST00000559715 RNASEKQ6P5S7 137 aaKnown RBP6.79□□□□□ -1.32
HERC1-204ENST00000559715 Q6ZRP5 223 aa6.79□□□□□ -1.32
HERC1-204ENST00000559715 MRPL52Q86TS9 123 aaKnown RBP6.79□□□□□ -1.32
HERC1-204ENST00000559715 MAP1LC3AQ9H492 121 aa6.79□□□□□ -1.32
HERC1-204ENST00000559715 CDC42SE2Q9NRR3 84 aa6.79□□□□□ -1.32
HERC1-204ENST00000559715 IGHV1-58A0A0C4DH39 117 aa6.78□□□□□ -1.32
HERC1-204ENST00000559715 K7EMI3 77 aa6.78□□□□□ -1.32
HERC1-204ENST00000559715 FCER1GP30273 86 aa6.78□□□□□ -1.32
HERC1-204ENST00000559715 PTTG1IPP53801 180 aa6.78□□□□□ -1.32
HERC1-204ENST00000559715 AMMECR1LQ6DCA0 310 aa6.78□□□□□ -1.32
HERC1-204ENST00000559715 REG3GQ6UW15 175 aa6.78□□□□□ -1.32
HERC1-204ENST00000559715 CBLN2Q8IUK8 224 aa6.78□□□□□ -1.32
HERC1-204ENST00000559715 CARD19Q96LW7 228 aa6.78□□□□□ -1.32
HERC1-204ENST00000559715 LINC00474Q9P2X8 69 aa6.78□□□□□ -1.32
HERC1-204ENST00000559715 SYCNQ0VAF6 134 aa6.77□□□□□ -1.33
HERC1-204ENST00000559715 CD164L2Q6UWJ8 174 aa6.77□□□□□ -1.33
HERC1-204ENST00000559715 ALKBH7Q9BT30 221 aaPredicted RBP6.77□□□□□ -1.33
HERC1-204ENST00000559715 NXT2Q9NPJ8 142 aaKnown RBP6.77□□□□□ -1.33
HERC1-204ENST00000559715 CSDC2Q9Y534 153 aaKnown RBP6.77□□□□□ -1.33
HERC1-204ENST00000559715 SMAGPQ0VAQ4 97 aa6.76□□□□□ -1.33
HERC1-204ENST00000559715 KIAA1644Q3SXP7 199 aa6.76□□□□□ -1.33
HERC1-204ENST00000559715 Q8N8P6 123 aa6.76□□□□□ -1.33
HERC1-204ENST00000559715 TMEM18Q96B42 140 aa6.76□□□□□ -1.33
HERC1-204ENST00000559715 TIMM21Q9BVV7 248 aa6.76□□□□□ -1.33
HERC1-204ENST00000559715 PSORS1C2Q9UIG4 136 aa6.76□□□□□ -1.33
HERC1-204ENST00000559715 LINC01546A6NGU7 62 aa6.75□□□□□ -1.33
HERC1-204ENST00000559715 FABP9Q0Z7S8 132 aa6.75□□□□□ -1.33
HERC1-204ENST00000559715 KRTAP11-1Q8IUC1 163 aa6.75□□□□□ -1.33
HERC1-204ENST00000559715 FAM104AQ969W3 186 aa6.75□□□□□ -1.33
HERC1-204ENST00000559715 TRAPPC1Q9Y5R8 145 aa6.75□□□□□ -1.33
HERC1-204ENST00000559715 IGLV4-69A0A075B6H9 119 aa6.74□□□□□ -1.33
HERC1-204ENST00000559715 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.74□□□□□ -1.33
HERC1-204ENST00000559715 RAB5AP20339 215 aa6.74□□□□□ -1.33
HERC1-204ENST00000559715 ZNF664Q8N3J9 261 aa6.74□□□□□ -1.33
HERC1-204ENST00000559715 SPANXA1Q9NS26 97 aa6.74□□□□□ -1.33
HERC1-204ENST00000559715 UBE2D4Q9Y2X8 147 aa6.74□□□□□ -1.33
HERC1-204ENST00000559715 LOC107984640A0A0U1RRK4 108 aa6.73□□□□□ -1.33
HERC1-204ENST00000559715 S100A1P23297 94 aa6.73□□□□□ -1.33
HERC1-204ENST00000559715 ORMDL2Q53FV1 153 aa6.73□□□□□ -1.33
HERC1-204ENST00000559715 TMEM101Q96IK0 257 aa6.73□□□□□ -1.33
HERC1-204ENST00000559715 LOC389332A0A1B0GUA5 103 aa6.72□□□□□ -1.33
HERC1-204ENST00000559715 COLCA2A8K830 154 aa6.72□□□□□ -1.33
HERC1-204ENST00000559715 ZNF561-AS1K7EIQ3 104 aa6.72□□□□□ -1.33
HERC1-204ENST00000559715 IFI27P40305 119 aaPredicted RBP6.72□□□□□ -1.33
HERC1-204ENST00000559715 MRPS36P82909 103 aaKnown RBP6.72□□□□□ -1.33
HERC1-204ENST00000559715 GAGE2BQ13066 116 aa6.72□□□□□ -1.33
HERC1-204ENST00000559715 SS18Q15532 418 aa6.72□□□□□ -1.33
HERC1-204ENST00000559715 C9orf116Q5BN46 136 aaPredicted RBP6.72□□□□□ -1.33
HERC1-204ENST00000559715 KRTAP7-1Q8IUC3 87 aa6.72□□□□□ -1.33
HERC1-204ENST00000559715 PYGO1Q9Y3Y4 419 aa6.72□□□□□ -1.33
HERC1-204ENST00000559715 LINC01549A6NIU2 74 aa6.71□□□□□ -1.34
HERC1-204ENST00000559715 ATP6V1G1O75348 118 aa6.71□□□□□ -1.34
HERC1-204ENST00000559715 NPSP0C0P6 89 aa6.71□□□□□ -1.34
HERC1-204ENST00000559715 G0S2P27469 103 aa6.71□□□□□ -1.34
HERC1-204ENST00000559715 RPL39P62891 51 aaKnown RBP6.71□□□□□ -1.34
HERC1-204ENST00000559715 PHF5AQ7RTV0 110 aaKnown RBP6.71□□□□□ -1.34
HERC1-204ENST00000559715 C18orf32Q8TCD1 76 aa6.71□□□□□ -1.34
HERC1-204ENST00000559715 CYSLTR1Q9Y271 337 aa6.71□□□□□ -1.34
HERC1-204ENST00000559715 PKIGQ9Y2B9 76 aa6.71□□□□□ -1.34
HERC1-204ENST00000559715 APOMO95445 188 aa6.7□□□□□ -1.34
HERC1-204ENST00000559715 KRTAP1-4P0C5Y4 121 aa6.7□□□□□ -1.34
HERC1-204ENST00000559715 RNASE13Q5GAN3 156 aaKnown RBP6.7□□□□□ -1.34
HERC1-204ENST00000559715 C2orf66Q6UXQ4 117 aa6.7□□□□□ -1.34
HERC1-204ENST00000559715 Q6ZUT4 128 aa6.7□□□□□ -1.34
HERC1-204ENST00000559715 PRR26Q8N8Z3 221 aa6.7□□□□□ -1.34
HERC1-204ENST00000559715 C2orf48Q96LS8 159 aa6.7□□□□□ -1.34
HERC1-204ENST00000559715 OPRPNQ99935 248 aaPredicted RBP6.7□□□□□ -1.34
HERC1-204ENST00000559715 C1orf196B1AJZ1 125 aa6.69□□□□□ -1.34
HERC1-204ENST00000559715 COX7A2LO14548 114 aa6.69□□□□□ -1.34
HERC1-204ENST00000559715 FA2HQ7L5A8 372 aa6.69□□□□□ -1.34
HERC1-204ENST00000559715 FAM168BA1KXE4 195 aa6.68□□□□□ -1.34
HERC1-204ENST00000559715 IGIPA6NJ69 53 aa6.68□□□□□ -1.34
HERC1-204ENST00000559715 SCO1O75880 301 aa6.68□□□□□ -1.34
HERC1-204ENST00000559715 IGLV7-43P04211 117 aa6.68□□□□□ -1.34
HERC1-204ENST00000559715 RAB5BP61020 215 aa6.68□□□□□ -1.34
HERC1-204ENST00000559715 RNF151Q2KHN1 245 aa6.68□□□□□ -1.34
HERC1-204ENST00000559715 C1orf137Q5JT78 98 aa6.68□□□□□ -1.34
HERC1-204ENST00000559715 C10orf25Q5T742 122 aa6.68□□□□□ -1.34
HERC1-204ENST00000559715 C5orf38Q86SI9 138 aa6.68□□□□□ -1.34
HERC1-204ENST00000559715 TOMM6Q96B49 74 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms