RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 HSBP1L1C9JCN9 74 aa11.69□□□□□ -0.54
CHRNA3-206ENST00000559658 CCL25O15444 150 aa11.69□□□□□ -0.54
CHRNA3-206ENST00000559658 SPINK8P0C7L1 97 aa11.69□□□□□ -0.54
CHRNA3-206ENST00000559658 DNAH10OSP0CZ25 163 aa11.69□□□□□ -0.54
CHRNA3-206ENST00000559658 NMUP48645 174 aa11.69□□□□□ -0.54
CHRNA3-206ENST00000559658 TSPEAR-AS2P59090 65 aa11.69□□□□□ -0.54
CHRNA3-206ENST00000559658 SIVA1O15304 175 aa11.68□□□□□ -0.54
CHRNA3-206ENST00000559658 PCP2Q8IVA1 136 aa11.68□□□□□ -0.54
CHRNA3-206ENST00000559658 UBE2WQ96B02 151 aa11.68□□□□□ -0.54
CHRNA3-206ENST00000559658 UPK3BQ9BT76 320 aa11.68□□□□□ -0.54
CHRNA3-206ENST00000559658 PKIAP61925 76 aa11.68□□□□□ -0.54
CHRNA3-206ENST00000559658 VPS13DQ5THJ4 4388 aa11.67□□□□□ -0.54
CHRNA3-206ENST00000559658 PCP4L1A6NKN8 68 aa11.66□□□□□ -0.54
CHRNA3-206ENST00000559658 HERVK_113P63121 156 aa11.66□□□□□ -0.54
CHRNA3-206ENST00000559658 CHCHD10Q8WYQ3 142 aaPredicted RBP11.66□□□□□ -0.54
CHRNA3-206ENST00000559658 KRTAP1-5Q9BYS1 174 aa11.66□□□□□ -0.54
CHRNA3-206ENST00000559658 IGHV3OR16-9A0A0B4J2B5 98 aa11.66□□□□□ -0.54
CHRNA3-206ENST00000559658 UBE2DNLQ8IWF7 75 aa11.66□□□□□ -0.54
CHRNA3-206ENST00000559658 WWC2-AS2Q96NR7 200 aa11.66□□□□□ -0.54
CHRNA3-206ENST00000559658 Q9H8V8 135 aa11.66□□□□□ -0.54
CHRNA3-206ENST00000559658 E9PLD3 99 aa11.65□□□□□ -0.54
CHRNA3-206ENST00000559658 C5orf38Q86SI9 138 aa11.65□□□□□ -0.54
CHRNA3-206ENST00000559658 SMIM1B2RUZ4 78 aa11.64□□□□□ -0.55
CHRNA3-206ENST00000559658 SS18Q15532 418 aa11.64□□□□□ -0.55
CHRNA3-206ENST00000559658 MAPKAPK5-AS1Q8N8E1 139 aa11.64□□□□□ -0.55
CHRNA3-206ENST00000559658 CRPP02741 224 aa11.63□□□□□ -0.55
CHRNA3-206ENST00000559658 SEC11AP67812 179 aa11.62□□□□□ -0.55
CHRNA3-206ENST00000559658 FOXI1Q12951 378 aa11.62□□□□□ -0.55
CHRNA3-206ENST00000559658 Q9HAA7 133 aa11.62□□□□□ -0.55
CHRNA3-206ENST00000559658 DNAH10Q8IVF4 4471 aa11.62□□□□□ -0.55
CHRNA3-206ENST00000559658 COX8AP10176 69 aa11.61□□□□□ -0.55
CHRNA3-206ENST00000559658 GAGE12HA6NDE8 117 aa11.61□□□□□ -0.55
CHRNA3-206ENST00000559658 HERVK_113P61574 105 aa11.61□□□□□ -0.55
CHRNA3-206ENST00000559658 KRTAP26-1Q6PEX3 210 aa11.61□□□□□ -0.55
CHRNA3-206ENST00000559658 IGHV1-58A0A0C4DH39 117 aa11.6□□□□□ -0.55
CHRNA3-206ENST00000559658 TSTD3H0UI37 97 aa11.6□□□□□ -0.55
CHRNA3-206ENST00000559658 A0A087WZ39 114 aa11.59□□□□□ -0.55
CHRNA3-206ENST00000559658 CASC10Q5T4H9 136 aa11.59□□□□□ -0.55
CHRNA3-206ENST00000559658 CD164L2Q6UWJ8 174 aa11.59□□□□□ -0.55
CHRNA3-206ENST00000559658 IGLV5-39A0A0G2JS06 123 aa11.59□□□□□ -0.55
CHRNA3-206ENST00000559658 H3BRM9 83 aa11.59□□□□□ -0.55
CHRNA3-206ENST00000559658 J3QQQ9 107 aa11.59□□□□□ -0.55
CHRNA3-206ENST00000559658 LEPROTO15243 131 aa11.59□□□□□ -0.55
CHRNA3-206ENST00000559658 BOD1L2Q8IYS8 172 aa11.59□□□□□ -0.55
CHRNA3-206ENST00000559658 MIAQ16674 131 aa11.58□□□□□ -0.56
CHRNA3-206ENST00000559658 MIEN1Q9BRT3 115 aa11.58□□□□□ -0.56
CHRNA3-206ENST00000559658 IBA57-AS1B1ANH7 110 aa11.57□□□□□ -0.56
CHRNA3-206ENST00000559658 SLC25A34Q6PIV7 304 aa11.57□□□□□ -0.56
CHRNA3-206ENST00000559658 UQCR10Q9UDW1 63 aa11.57□□□□□ -0.56
CHRNA3-206ENST00000559658 C2orf91Q6ZV80 131 aa11.57□□□□□ -0.56
CHRNA3-206ENST00000559658 PLEKHB2Q96CS7 222 aa11.57□□□□□ -0.56
CHRNA3-206ENST00000559658 IGKV2D-24A0A075B6R9 120 aa11.56□□□□□ -0.56
CHRNA3-206ENST00000559658 DDTP30046 118 aa11.56□□□□□ -0.56
CHRNA3-206ENST00000559658 KMT2AQ03164 3969 aa11.56□□□□□ -0.56
CHRNA3-206ENST00000559658 ZNF815PA8K554 130 aa11.55□□□□□ -0.56
CHRNA3-206ENST00000559658 COX7A2LO14548 114 aa11.55□□□□□ -0.56
CHRNA3-206ENST00000559658 TRAV8-4A0A0B4J246 113 aa11.55□□□□□ -0.56
CHRNA3-206ENST00000559658 LGALS3P17931 250 aaKnown RBP11.55□□□□□ -0.56
CHRNA3-206ENST00000559658 C1orf43Q9BWL3 253 aa11.54□□□□□ -0.56
CHRNA3-206ENST00000559658 TOMM7Q9P0U1 55 aa11.54□□□□□ -0.56
CHRNA3-206ENST00000559658 MYMXA0A1B0GTQ4 84 aa11.53□□□□□ -0.56
CHRNA3-206ENST00000559658 C10orf126Q8N4M7 172 aa11.53□□□□□ -0.56
CHRNA3-206ENST00000559658 LINC00526Q96FQ7 95 aa11.53□□□□□ -0.56
CHRNA3-206ENST00000559658 LINC00587B1AMM8 73 aa11.53□□□□□ -0.56
CHRNA3-206ENST00000559658 DLEU1O43261 78 aa11.51□□□□□ -0.57
CHRNA3-206ENST00000559658 HNRNPA3P51991 378 aaKnown RBP11.51□□□□□ -0.57
CHRNA3-206ENST00000559658 COX7B2Q8TF08 81 aa11.51□□□□□ -0.57
CHRNA3-206ENST00000559658 NDUFA12Q9UI09 145 aa11.51□□□□□ -0.57
CHRNA3-206ENST00000559658 ALMS1Q8TCU4 4167 aa11.51□□□□□ -0.57
CHRNA3-206ENST00000559658 M0R2N4 97 aa11.51□□□□□ -0.57
CHRNA3-206ENST00000559658 MALP21145 153 aa11.51□□□□□ -0.57
CHRNA3-206ENST00000559658 ORAOV1Q8WV07 137 aa11.51□□□□□ -0.57
CHRNA3-206ENST00000559658 NBDYA0A0U1RRE5 68 aa11.5□□□□□ -0.57
CHRNA3-206ENST00000559658 C2orf82Q6UX34 121 aa11.5□□□□□ -0.57
CHRNA3-206ENST00000559658 ZNF625Q96I27 306 aaPredicted RBP11.5□□□□□ -0.57
CHRNA3-206ENST00000559658 KIAA0087Q14695 138 aa11.49□□□□□ -0.57
CHRNA3-206ENST00000559658 C15orf56Q8N910 161 aa11.49□□□□□ -0.57
CHRNA3-206ENST00000559658 CTAG1AP78358 180 aa11.49□□□□□ -0.57
CHRNA3-206ENST00000559658 C6orf223Q8N319 242 aa11.49□□□□□ -0.57
CHRNA3-206ENST00000559658 LY6G6CO95867 125 aa11.48□□□□□ -0.57
CHRNA3-206ENST00000559658 HIGD2BQ4VC39 106 aa11.48□□□□□ -0.57
CHRNA3-206ENST00000559658 DNAH2Q9P225 4427 aa11.48□□□□□ -0.57
CHRNA3-206ENST00000559658 A0A0J9YXY3 114 aa11.47□□□□□ -0.57
CHRNA3-206ENST00000559658 C3orf84H3BNL1 204 aa11.47□□□□□ -0.57
CHRNA3-206ENST00000559658 NDUFA1O15239 70 aa11.47□□□□□ -0.57
CHRNA3-206ENST00000559658 LINC00476Q8WZB0 136 aa11.47□□□□□ -0.57
CHRNA3-206ENST00000559658 HYDINQ4G0P3 5121 aa11.47□□□□□ -0.57
CHRNA3-206ENST00000559658 SCGB1D4Q6XE38 83 aa11.46□□□□□ -0.57
CHRNA3-206ENST00000559658 LINC01561Q8N1V8 128 aa11.46□□□□□ -0.57
CHRNA3-206ENST00000559658 LECT2O14960 151 aa11.46□□□□□ -0.58
CHRNA3-206ENST00000559658 SPAG11BQ08648 103 aa11.46□□□□□ -0.58
CHRNA3-206ENST00000559658 WFDC2Q14508 124 aa11.45□□□□□ -0.58
CHRNA3-206ENST00000559658 Q8IZM0 81 aa11.45□□□□□ -0.58
CHRNA3-206ENST00000559658 K7EP13 123 aa11.44□□□□□ -0.58
CHRNA3-206ENST00000559658 C10orf25Q5T742 122 aa11.44□□□□□ -0.58
CHRNA3-206ENST00000559658 LITAFQ99732 161 aa11.44□□□□□ -0.58
CHRNA3-206ENST00000559658 A0A0U1RRA0 63 aa11.43□□□□□ -0.58
CHRNA3-206ENST00000559658 PRSS2P07478 247 aa11.43□□□□□ -0.58
CHRNA3-206ENST00000559658 C6orf226Q5I0X4 101 aa11.43□□□□□ -0.58
CHRNA3-206ENST00000559658 TTC32Q5I0X7 151 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms